RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ZNF625Q96I27 306 aaPredicted RBP2.2□□□□□ -2.06
CCDC39-207ENST00000495817 RETNLBQ9BQ08 111 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 SPANXDQ9BXN6 97 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 ATG5Q9H1Y0 275 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 MED9Q9NWA0 146 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 CEP192Q8TEP8 1941 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 USP9XQ93008 2570 aaPredicted RBP2.2□□□□□ -2.06
CCDC39-207ENST00000495817 SPTA1P02549 2419 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 LRRK2Q5S007 2527 aa2.2□□□□□ -2.06
CCDC39-207ENST00000495817 TRAV1-1A0A0B4J248 108 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 RBAKDNA6NC62 111 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 CLPSP04118 112 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 NPC2P61916 151 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 NUMA1Q14980 2115 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 C6orf52Q5T4I8 152 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 ZNF720Q7Z2F6 126 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 POP5Q969H6 163 aaKnown RBP2.19□□□□□ -2.06
CCDC39-207ENST00000495817 RAB37Q96AX2 223 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 CHCHD1Q96BP2 118 aaKnown RBP2.19□□□□□ -2.06
CCDC39-207ENST00000495817 NPVFQ9HCQ7 196 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 TAS2R4Q9NYW5 299 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 AP4S1Q9Y587 144 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 USP9YO00507 2555 aaPredicted RBP2.19□□□□□ -2.06
CCDC39-207ENST00000495817 MYOFQ9NZM1 2061 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 DOPEY2Q9Y3R5 2298 aa2.19□□□□□ -2.06
CCDC39-207ENST00000495817 PI4KAP42356 2102 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 ABCA12Q86UK0 2595 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 ZFHX3Q15911 3703 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 COL6A6A6NMZ7 2263 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 IGKV2D-26A0A0A0MRZ7 120 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 TRAV3A0A0B4J244 114 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 LOC107986453A0A1B0GWG9 222 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 IGLV1-51P01701 117 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 GYPBP06028 91 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 NMBP08949 121 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 Q0VG73 95 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 AQP10Q96PS8 301 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 NABP2Q9BQ15 211 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 SAR1AQ9NR31 198 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 CELSR2Q9HCU4 2923 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 CRYBG3Q68DQ2 2970 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 TLN1Q9Y490 2541 aaKnown RBP2.18□□□□□ -2.06
CCDC39-207ENST00000495817 FBN3Q75N90 2809 aa2.18□□□□□ -2.06
CCDC39-207ENST00000495817 FN1P02751 2386 aaKnown RBP2.17□□□□□ -2.06
CCDC39-207ENST00000495817 PDZD2O15018 2839 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 A0A0D9SG52 128 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 H3BQ15 152 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 K7EP34 96 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 HYPMO75409 117 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 TCL1BO95988 128 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 ZNF705BP0CI00 300 aaPredicted RBP2.17□□□□□ -2.06
CCDC39-207ENST00000495817 SAA1P0DJI8 122 aaPredicted RBP2.17□□□□□ -2.06
CCDC39-207ENST00000495817 INSL4Q14641 139 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 DEFB133Q30KQ1 61 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 OR2T2Q6IF00 324 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 Q8IYB0 196 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 Q8N814 137 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 BET1LQ9NYM9 111 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 TPRKBQ9Y3C4 175 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 ITPR2Q14571 2701 aa2.17□□□□□ -2.06
CCDC39-207ENST00000495817 GOLGA4Q13439 2230 aaKnown RBP2.16□□□□□ -2.06
CCDC39-207ENST00000495817 TRGV2A0A075B6R0 118 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 NDUFB6O95139 128 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 LINC00032P0C843 101 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 CKS2P33552 79 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 SNCAP37840 140 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 ETV6P41212 452 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 LSM3P62310 102 aaKnown RBP2.16□□□□□ -2.06
CCDC39-207ENST00000495817 DCDP81605 110 aaKnown RBP2.16□□□□□ -2.06
CCDC39-207ENST00000495817 MRPS36P82909 103 aaKnown RBP2.16□□□□□ -2.06
CCDC39-207ENST00000495817 PEA15Q15121 130 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 IQCJQ1A5X6 159 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 Q5BKY6 102 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 ALKAL2Q6UX46 152 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 OR8B3Q8NGG8 313 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 VSTM2AQ8TAG5 236 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 HYLS1Q96M11 299 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 REG4Q9BYZ8 158 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 CST11Q9H112 138 aa2.16□□□□□ -2.06
CCDC39-207ENST00000495817 SPTAN1Q13813 2472 aaKnown RBP2.16□□□□□ -2.06
CCDC39-207ENST00000495817 CENPEQ02224 2701 aa2.15□□□□□ -2.06
CCDC39-207ENST00000495817 ZNF469Q96JG9 3925 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-207ENST00000495817 IGKV1D-42A0A075B6H8 117 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 FAM24AA6NFZ4 105 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 IBA57-AS1B1ANH7 110 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 ZNF736B4DX44 427 aaPredicted RBP2.15□□□□□ -2.07
CCDC39-207ENST00000495817 J3QLW9 94 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 YPEL1O60688 119 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 SNCGO76070 127 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 UBL3O95164 117 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 IL5P05113 134 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 TRAPPC2P0DI81 140 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 TRAPPC2BP0DI82 140 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 COX6A1P12074 109 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 SLC25A6P12236 298 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 COX7CP15954 63 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 TDRG1Q3Y452 100 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 SBSPONQ8IVN8 264 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 Q8N8P6 123 aa2.15□□□□□ -2.07
CCDC39-207ENST00000495817 OR2T35Q8NGX2 323 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms