RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 FAM104AQ969W3 186 aa7.6□□□□□ -1.19
PKP4-215ENST00000494945 AMELXQ99217 191 aa7.6□□□□□ -1.19
PKP4-215ENST00000494945 CST9LQ9H4G1 147 aa7.6□□□□□ -1.19
PKP4-215ENST00000494945 TRAV8-6A0A0B4J262 113 aa7.59□□□□□ -1.19
PKP4-215ENST00000494945 A0A1B0GUV1 79 aa7.59□□□□□ -1.19
PKP4-215ENST00000494945 F8VRH5 84 aa7.59□□□□□ -1.19
PKP4-215ENST00000494945 TEX43Q6ZNM6 134 aa7.59□□□□□ -1.19
PKP4-215ENST00000494945 Q6ZUT4 128 aa7.59□□□□□ -1.19
PKP4-215ENST00000494945 C12orf57Q99622 126 aa7.59□□□□□ -1.19
PKP4-215ENST00000494945 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
PKP4-215ENST00000494945 C2orf88Q9BSF0 95 aa7.59□□□□□ -1.19
PKP4-215ENST00000494945 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
PKP4-215ENST00000494945 CHTOPQ9Y3Y2 248 aaKnown RBP7.59□□□□□ -1.19
PKP4-215ENST00000494945 NUPR2A6NF83 97 aa7.58□□□□□ -1.2
PKP4-215ENST00000494945 IGLL5B9A064 214 aa7.58□□□□□ -1.2
PKP4-215ENST00000494945 DPM2O94777 84 aa7.58□□□□□ -1.2
PKP4-215ENST00000494945 PLNP26678 52 aa7.58□□□□□ -1.2
PKP4-215ENST00000494945 ESRGQ1W209 222 aa7.58□□□□□ -1.2
PKP4-215ENST00000494945 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
PKP4-215ENST00000494945 PMCHL2Q9BQD1 86 aa7.58□□□□□ -1.2
PKP4-215ENST00000494945 MRPL35Q9NZE8 188 aaKnown RBP7.58□□□□□ -1.2
PKP4-215ENST00000494945 TMEM262E9PQX1 116 aa7.57□□□□□ -1.2
PKP4-215ENST00000494945 IGKCP01834 107 aa7.57□□□□□ -1.2
PKP4-215ENST00000494945 S100A12P80511 92 aa7.57□□□□□ -1.2
PKP4-215ENST00000494945 ZC2HC1BQ5TFG8 222 aa7.57□□□□□ -1.2
PKP4-215ENST00000494945 CDPF1Q6NVV7 123 aa7.57□□□□□ -1.2
PKP4-215ENST00000494945 KLK5Q9Y337 293 aaPredicted RBP7.57□□□□□ -1.2
PKP4-215ENST00000494945 FBN3Q75N90 2809 aa7.56□□□□□ -1.2
PKP4-215ENST00000494945 TCTAP57738 103 aa7.56□□□□□ -1.2
PKP4-215ENST00000494945 RBX1P62877 108 aa7.56□□□□□ -1.2
PKP4-215ENST00000494945 MPV17L2Q567V2 206 aa7.56□□□□□ -1.2
PKP4-215ENST00000494945 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
PKP4-215ENST00000494945 VAMP8Q9BV40 100 aa7.56□□□□□ -1.2
PKP4-215ENST00000494945 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
PKP4-215ENST00000494945 IGLV4-69A0A075B6H9 119 aa7.55□□□□□ -1.2
PKP4-215ENST00000494945 IGLV4-60A0A075B6I1 120 aa7.55□□□□□ -1.2
PKP4-215ENST00000494945 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
PKP4-215ENST00000494945 IGLC3P0DOY3 106 aa7.55□□□□□ -1.2
PKP4-215ENST00000494945 CCL18P55774 89 aa7.55□□□□□ -1.2
PKP4-215ENST00000494945 RNASE13Q5GAN3 156 aaKnown RBP7.55□□□□□ -1.2
PKP4-215ENST00000494945 NFE4Q86UQ8 179 aa7.55□□□□□ -1.2
PKP4-215ENST00000494945 HSBP1L1C9JCN9 74 aa7.54□□□□□ -1.2
PKP4-215ENST00000494945 UBE2D1P51668 147 aa7.54□□□□□ -1.2
PKP4-215ENST00000494945 SEC11AP67812 179 aa7.54□□□□□ -1.2
PKP4-215ENST00000494945 FAM19A3Q7Z5A8 133 aa7.54□□□□□ -1.2
PKP4-215ENST00000494945 APLNQ9ULZ1 77 aa7.54□□□□□ -1.2
PKP4-215ENST00000494945 MRPS16Q9Y3D3 137 aaKnown RBP7.54□□□□□ -1.2
PKP4-215ENST00000494945 DNAH7Q8WXX0 4024 aa7.54□□□□□ -1.2
PKP4-215ENST00000494945 A0A0J9YXV3 536 aa7.53□□□□□ -1.2
PKP4-215ENST00000494945 TINCRA0A1B0GVN0 87 aa7.53□□□□□ -1.2
PKP4-215ENST00000494945 C11orf86A6NJI1 115 aa7.53□□□□□ -1.2
PKP4-215ENST00000494945 CCL25O15444 150 aa7.53□□□□□ -1.2
PKP4-215ENST00000494945 WFDC10BQ8IUB3 73 aa7.53□□□□□ -1.2
PKP4-215ENST00000494945 CHAC1Q9BUX1 264 aa7.53□□□□□ -1.2
PKP4-215ENST00000494945 TGP01266 2768 aa7.52□□□□□ -1.21
PKP4-215ENST00000494945 hDV102S1A0JD36 115 aa7.52□□□□□ -1.21
PKP4-215ENST00000494945 ANGP03950 147 aaKnown RBP7.52□□□□□ -1.21
PKP4-215ENST00000494945 UPK3BQ9BT76 320 aa7.52□□□□□ -1.21
PKP4-215ENST00000494945 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.21
PKP4-215ENST00000494945 LINC00588Q9Y4M8 146 aa7.52□□□□□ -1.21
PKP4-215ENST00000494945 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
PKP4-215ENST00000494945 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
PKP4-215ENST00000494945 HERVK_113P63121 156 aa7.51□□□□□ -1.21
PKP4-215ENST00000494945 MAJINQ3KP22 176 aa7.51□□□□□ -1.21
PKP4-215ENST00000494945 SPATA45Q537H7 98 aa7.51□□□□□ -1.21
PKP4-215ENST00000494945 LINC01556Q5JQF7 62 aa7.51□□□□□ -1.21
PKP4-215ENST00000494945 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
PKP4-215ENST00000494945 GEMIN7Q9H840 131 aaKnown RBP7.51□□□□□ -1.21
PKP4-215ENST00000494945 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 LINC00959A0A1B0GUT2 108 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 IGHV3-30P01768 117 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 IGHV3-33P01772 117 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 DNAH10OSP0CZ25 163 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 IGHV3-30-3P0DP02 117 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 IGHV3-30-5P0DP03 117 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 ZNF22P17026 224 aaPredicted RBP7.5□□□□□ -1.21
PKP4-215ENST00000494945 SS18Q15532 418 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 TMEM170BQ5T4T1 132 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 Q8N3U1 123 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 STPG4Q8N801 248 aa7.5□□□□□ -1.21
PKP4-215ENST00000494945 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 IGKV3OR2-268A0A0C4DH90 116 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 SIVA1O15304 175 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 HERVK_113P61574 105 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 REG3AQ06141 175 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 MUC7Q8TAX7 377 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 PRR34Q9NV39 138 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 KLK12Q9UKR0 248 aa7.49□□□□□ -1.21
PKP4-215ENST00000494945 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
PKP4-215ENST00000494945 H3BRM9 83 aa7.48□□□□□ -1.21
PKP4-215ENST00000494945 CRPP02741 224 aa7.48□□□□□ -1.21
PKP4-215ENST00000494945 ANKRD39Q53RE8 183 aa7.48□□□□□ -1.21
PKP4-215ENST00000494945 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
PKP4-215ENST00000494945 E9PLD3 99 aa7.47□□□□□ -1.21
PKP4-215ENST00000494945 TSTD3H0UI37 97 aa7.47□□□□□ -1.21
PKP4-215ENST00000494945 COX6A2Q02221 97 aa7.47□□□□□ -1.21
PKP4-215ENST00000494945 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
PKP4-215ENST00000494945 UBE2DNLQ8IWF7 75 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms