RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 IL17DQ8TAD2 202 aa13.38□□□□□ -0.27
TSPAN4-212ENST00000494815 TMEM263Q8WUH6 116 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-212ENST00000494815 POLR2KP53803 58 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-212ENST00000494815 SFTA2Q6UW10 78 aa13.37□□□□□ -0.27
TSPAN4-212ENST00000494815 SMIM20Q8N5G0 67 aa13.37□□□□□ -0.27
TSPAN4-212ENST00000494815 TMEM141Q96I45 108 aa13.37□□□□□ -0.27
TSPAN4-212ENST00000494815 KRTAP24-1Q3LI83 254 aa13.36□□□□□ -0.27
TSPAN4-212ENST00000494815 CSNK1G2-AS1Q8NCQ2 148 aa13.36□□□□□ -0.27
TSPAN4-212ENST00000494815 RHODO00212 210 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 VCYO14598 125 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 PPDPFLQ8WWR9 84 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 TRBV20-1A0A075B6N2 111 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 IGHV3-30P01768 117 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 IGHV3-30-5P0DP03 117 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 EMP1P54849 157 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 TEN1Q86WV5 123 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
TSPAN4-212ENST00000494815 TRBV27A0A0K0K1C4 114 aa13.34□□□□□ -0.27
TSPAN4-212ENST00000494815 SDHAF1A6NFY7 115 aa13.34□□□□□ -0.27
TSPAN4-212ENST00000494815 WIPF1O43516 503 aa13.34□□□□□ -0.27
TSPAN4-212ENST00000494815 TCL1BO95988 128 aa13.34□□□□□ -0.27
TSPAN4-212ENST00000494815 SBSPONQ8IVN8 264 aa13.34□□□□□ -0.27
TSPAN4-212ENST00000494815 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
TSPAN4-212ENST00000494815 NHLRC4P0CG21 123 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-212ENST00000494815 CFC1BP0CG36 223 aa13.33□□□□□ -0.28
TSPAN4-212ENST00000494815 CFC1P0CG37 223 aa13.33□□□□□ -0.28
TSPAN4-212ENST00000494815 TSPEAR-AS2P59090 65 aa13.33□□□□□ -0.28
TSPAN4-212ENST00000494815 C16orf74Q96GX8 76 aa13.33□□□□□ -0.28
TSPAN4-212ENST00000494815 CARD19Q96LW7 228 aa13.33□□□□□ -0.28
TSPAN4-212ENST00000494815 KIR2DL4Q99706 377 aa13.33□□□□□ -0.28
TSPAN4-212ENST00000494815 RS1O15537 224 aa13.32□□□□□ -0.28
TSPAN4-212ENST00000494815 RPL39P62891 51 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-212ENST00000494815 C10orf126Q8N4M7 172 aa13.32□□□□□ -0.28
TSPAN4-212ENST00000494815 VCX2Q9H322 139 aa13.32□□□□□ -0.28
TSPAN4-212ENST00000494815 DAZ2Q13117 558 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-212ENST00000494815 TMEM170BQ5T4T1 132 aa13.31□□□□□ -0.28
TSPAN4-212ENST00000494815 ZNRF2Q8NHG8 242 aa13.31□□□□□ -0.28
TSPAN4-212ENST00000494815 AMELXQ99217 191 aa13.31□□□□□ -0.28
TSPAN4-212ENST00000494815 TRGV1A0A0A0MS02 117 aa13.3□□□□□ -0.28
TSPAN4-212ENST00000494815 IGHV3-73A0A0B4J1V6 119 aa13.3□□□□□ -0.28
TSPAN4-212ENST00000494815 PRO1854Q9UHT4 67 aa13.3□□□□□ -0.28
TSPAN4-212ENST00000494815 J3QQQ9 107 aa13.29□□□□□ -0.28
TSPAN4-212ENST00000494815 NACAE9PAV3 2078 aa13.28□□□□□ -0.28
TSPAN4-212ENST00000494815 IGHV3-53P01767 116 aa13.28□□□□□ -0.28
TSPAN4-212ENST00000494815 ZFAND6Q6FIF0 208 aa13.28□□□□□ -0.28
TSPAN4-212ENST00000494815 DEFB104AQ8WTQ1 72 aa13.28□□□□□ -0.28
TSPAN4-212ENST00000494815 PLAC8L1A1L4L8 177 aa13.28□□□□□ -0.28
TSPAN4-212ENST00000494815 LGALS3P17931 250 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-212ENST00000494815 I3L3M4 83 aa13.26□□□□□ -0.29
TSPAN4-212ENST00000494815 SCGB1C2P0DMR2 95 aa13.26□□□□□ -0.29
TSPAN4-212ENST00000494815 RHOHQ15669 191 aa13.26□□□□□ -0.29
TSPAN4-212ENST00000494815 Q6ZTI0 123 aa13.26□□□□□ -0.29
TSPAN4-212ENST00000494815 ANKRD29Q8N6D5 301 aa13.26□□□□□ -0.29
TSPAN4-212ENST00000494815 C3orf56Q8N813 242 aa13.26□□□□□ -0.29
TSPAN4-212ENST00000494815 OVOL2Q9BRP0 275 aa13.26□□□□□ -0.29
TSPAN4-212ENST00000494815 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
TSPAN4-212ENST00000494815 Q6ZSN1 163 aa13.25□□□□□ -0.29
TSPAN4-212ENST00000494815 KIR2DL5BQ8NHK3 375 aa13.25□□□□□ -0.29
TSPAN4-212ENST00000494815 TRAV4A0A0B4J268 109 aa13.25□□□□□ -0.29
TSPAN4-212ENST00000494815 DNAJC30Q96LL9 226 aa13.25□□□□□ -0.29
TSPAN4-212ENST00000494815 TRRAPQ9Y4A5 3859 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 M0QXV9 152 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 LEPROTO15243 131 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 PRIMA1Q86XR5 153 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 GAGE12JA6NER3 117 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 CCDC179H3BU77 68 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 GAGE7O76087 117 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 GAGE12FP0CL80 117 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 GAGE12GP0CL81 117 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 GAGE12IP0CL82 117 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 P0DMU3 169 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 FAM231AP0DMU4 169 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 FAM231CP0DMU5 169 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 GAGE4Q13068 117 aa13.24□□□□□ -0.29
TSPAN4-212ENST00000494815 TMEM223A0PJW6 202 aa13.23□□□□□ -0.29
TSPAN4-212ENST00000494815 A4D1N5 150 aa13.22□□□□□ -0.29
TSPAN4-212ENST00000494815 A0A0B4J2C4 111 aa13.22□□□□□ -0.29
TSPAN4-212ENST00000494815 TMEM262E9PQX1 116 aa13.22□□□□□ -0.29
TSPAN4-212ENST00000494815 IGHV3-33P01772 117 aa13.22□□□□□ -0.29
TSPAN4-212ENST00000494815 APOC4P55056 127 aa13.22□□□□□ -0.29
TSPAN4-212ENST00000494815 SMIM9A6NGZ8 99 aa13.21□□□□□ -0.29
TSPAN4-212ENST00000494815 SLC25A20O43772 301 aa13.21□□□□□ -0.29
TSPAN4-212ENST00000494815 EIF4EBP3O60516 100 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-212ENST00000494815 FBN1P35555 2871 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-212ENST00000494815 NDUFV3P56181 108 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-212ENST00000494815 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
TSPAN4-212ENST00000494815 TRGV2A0A075B6R0 118 aa13.19□□□□□ -0.3
TSPAN4-212ENST00000494815 TRBV10-1A0A0K0K1A3 114 aa13.19□□□□□ -0.3
TSPAN4-212ENST00000494815 C9JAW5 83 aa13.19□□□□□ -0.3
TSPAN4-212ENST00000494815 ZNF22P17026 224 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-212ENST00000494815 C20orf203Q8NBC4 194 aa13.19□□□□□ -0.3
TSPAN4-212ENST00000494815 Q9UF83 564 aa13.19□□□□□ -0.3
TSPAN4-212ENST00000494815 X6R8D5 127 aa13.18□□□□□ -0.3
TSPAN4-212ENST00000494815 MUSTN1Q8IVN3 82 aa13.18□□□□□ -0.3
TSPAN4-212ENST00000494815 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-212ENST00000494815 K7EQD1 137 aa13.17□□□□□ -0.3
TSPAN4-212ENST00000494815 STAB1Q9NY15 2570 aa13.17□□□□□ -0.3
TSPAN4-212ENST00000494815 IGHV3-64A0A075B6Q5 118 aa13.15□□□□□ -0.3
TSPAN4-212ENST00000494815 LINC00612Q8N6U2 182 aa13.15□□□□□ -0.3
TSPAN4-212ENST00000494815 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms