RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 Q8N814 137 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 GON4LQ3T8J9 2241 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 PATE3B3GLJ2 98 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 F6UB75 175 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 WFDC11Q8NEX6 87 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 LINC00474Q9P2X8 69 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 SPTBN5Q9NRC6 3674 aaKnown RBP3.38□□□□□ -1.87
PRKD3-210ENST00000494667 LAMA2P24043 3122 aaKnown RBP3.38□□□□□ -1.87
PRKD3-210ENST00000494667 CCL18P55774 89 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 ECSCRQ19T08 205 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 IL17DQ8TAD2 202 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
PRKD3-210ENST00000494667 K7EQG2 157 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 ATP1A1-AS1Q5TC04 95 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 DYNLRB2Q8TF09 96 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 RMI2Q96E14 147 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 RHPN1-AS1Q9BWJ2 59 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 CDC42SE2Q9NRR3 84 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 TRBV10-1A0A0K0K1A3 114 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 LY6HO94772 140 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 IGLV1-40P01703 118 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 MOB4Q9Y3A3 225 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 IGHV3OR16-13A0A075B7E8 117 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 IGHV3-74A0A0B4J1X5 117 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 ZNF561-AS1K7EIQ3 104 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 NBL1P41271 181 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 NANOS2P60321 138 aaKnown RBP3.37□□□□□ -1.87
PRKD3-210ENST00000494667 DEFB114Q30KQ6 69 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 C11orf44Q8N8P7 122 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 COX7B2Q8TF08 81 aa3.37□□□□□ -1.87
PRKD3-210ENST00000494667 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.36□□□□□ -1.87
PRKD3-210ENST00000494667 A0A096LNT2 108 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 IGHV3-49A0A0A0MS15 119 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 TMEM89A2RUT3 159 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 G3V318 75 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 WDFY3Q8IZQ1 3526 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 CNTRLQ7Z7A1 2325 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 TRAV10A0A0B4J240 114 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 HOXD3P31249 432 aaPredicted RBP3.36□□□□□ -1.87
PRKD3-210ENST00000494667 RBM3P98179 157 aaKnown RBP3.36□□□□□ -1.87
PRKD3-210ENST00000494667 MUC7Q8TAX7 377 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 LAMA1P25391 3075 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 DEFB1P60022 68 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 RPL36AP83881 106 aaKnown RBP3.36□□□□□ -1.87
PRKD3-210ENST00000494667 PRB3Q04118 309 aaPredicted RBP3.36□□□□□ -1.87
PRKD3-210ENST00000494667 FBXL19-AS1Q494R0 122 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 Q6ZVQ6 151 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 TMEM254Q8TBM7 123 aa3.36□□□□□ -1.87
PRKD3-210ENST00000494667 RPL36ALQ969Q0 106 aaKnown RBP3.36□□□□□ -1.87
PRKD3-210ENST00000494667 FAM229BQ4G0N7 80 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 C11orf71Q6IPW1 123 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 BPESC1Q9GZL8 116 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 KIAA0100Q14667 2235 aaKnown RBP3.35□□□□□ -1.87
PRKD3-210ENST00000494667 hDV103S1A0JD37 113 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 RNASE13Q5GAN3 156 aaKnown RBP3.35□□□□□ -1.87
PRKD3-210ENST00000494667 Q6ZSN1 163 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 A0A087WZ39 114 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 PLA2G2CQ5R387 149 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 ZZEF1O43149 2961 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 PRYO14603 147 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 SAA4P35542 130 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 SNRPD3P62318 126 aaKnown RBP3.35□□□□□ -1.87
PRKD3-210ENST00000494667 NREPQ16612 68 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 DEFB104AQ8WTQ1 72 aa3.35□□□□□ -1.87
PRKD3-210ENST00000494667 CFAP54Q96N23 3096 aa3.34□□□□□ -1.87
PRKD3-210ENST00000494667 CYP4F30PQ9H0H9 118 aa3.34□□□□□ -1.87
PRKD3-210ENST00000494667 PLA2G2AP14555 144 aa3.34□□□□□ -1.87
PRKD3-210ENST00000494667 STHQ8IWL8 128 aa3.34□□□□□ -1.87
PRKD3-210ENST00000494667 WFDC9Q8NEX5 89 aa3.34□□□□□ -1.87
PRKD3-210ENST00000494667 TM2D3Q9BRN9 247 aa3.34□□□□□ -1.87
PRKD3-210ENST00000494667 IGHV4-30-2A0A087WSY4 118 aa3.34□□□□□ -1.88
PRKD3-210ENST00000494667 COX17Q14061 63 aa3.34□□□□□ -1.88
PRKD3-210ENST00000494667 LINC00575Q6W349 94 aa3.34□□□□□ -1.88
PRKD3-210ENST00000494667 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 LYRM9A8MSI8 78 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 IGHV4-59P01825 116 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 PROK1P58294 105 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 NTM-AS1Q6ZSK4 140 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 ZCCHC13Q8WW36 166 aaKnown RBP3.33□□□□□ -1.88
PRKD3-210ENST00000494667 CELA1Q9UNI1 258 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 SNURFQ9Y675 71 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 CDH23Q9H251 3354 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 CADP27708 2225 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 Q8N3U1 123 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 VCANP13611 3396 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 CUL9Q8IWT3 2517 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 PLCE1Q9P212 2302 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 LOC100131303A0A0U1RQF7 123 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 A0A1B0GW54 56 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 DGAT2L7PQ6IED9 249 aa3.33□□□□□ -1.88
PRKD3-210ENST00000494667 NBEAQ8NFP9 2946 aa3.32□□□□□ -1.88
PRKD3-210ENST00000494667 FUSP35637 526 aaKnown RBP eCLIP3.32□□□□□ -1.88
PRKD3-210ENST00000494667 ABCA1O95477 2261 aa3.32□□□□□ -1.88
PRKD3-210ENST00000494667 IGHV4-28A0A0C4DH34 117 aa3.32□□□□□ -1.88
PRKD3-210ENST00000494667 LYNX1G3V0Z9 82 aa3.32□□□□□ -1.88
PRKD3-210ENST00000494667 SLPIP03973 132 aa3.32□□□□□ -1.88
PRKD3-210ENST00000494667 LYNX1P0DP58 116 aa3.32□□□□□ -1.88
PRKD3-210ENST00000494667 LCE2DQ5TA82 110 aaPredicted RBP3.32□□□□□ -1.88
PRKD3-210ENST00000494667 A0A0U1RRA0 63 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms