RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 RNASE6Q93091 150 aaKnown RBP2□□□□□ -2.09
MDC1-208ENST00000494654 HES7Q9BYE0 225 aa2□□□□□ -2.09
MDC1-208ENST00000494654 KRTAP4-9Q9BYQ8 210 aa2□□□□□ -2.09
MDC1-208ENST00000494654 XCL2Q9UBD3 114 aa2□□□□□ -2.09
MDC1-208ENST00000494654 NDUFA12Q9UI09 145 aa2□□□□□ -2.09
MDC1-208ENST00000494654 KLK9Q9UKQ9 250 aa2□□□□□ -2.09
MDC1-208ENST00000494654 PHLDA3Q9Y5J5 127 aa2□□□□□ -2.09
MDC1-208ENST00000494654 SPTA1P02549 2419 aa2□□□□□ -2.09
MDC1-208ENST00000494654 CREBBPQ92793 2442 aa2□□□□□ -2.09
MDC1-208ENST00000494654 SPENQ96T58 3664 aaKnown RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 NOTCH2Q04721 2471 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 IGHV3-64A0A075B6Q5 118 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 IGLV5-45A0A087WSX0 123 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 IGHV3-72A0A0B4J1Y9 119 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 IGKV3D-7A0A0C4DH55 119 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 TRBV7-6A0A0J9YX20 115 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 A0A0J9YXV3 536 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 PLAC8L1A1L4L8 177 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 SPRY3O43610 288 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 NDUFB3O43676 98 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 ENSAO43768 121 aaKnown RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 TRBV12-3P01733 135 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 CRPP02741 224 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 PRSS2P07478 247 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 BAALC-AS2P0C853 105 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 APELAP0DMC3 54 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 PRB4P10163 310 aaPredicted RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 CD28P10747 220 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 RNASE3P12724 160 aaKnown RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 S100A4P26447 101 aaKnown RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 RPL28P46779 137 aaKnown RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 FAM27E3Q08E93 113 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 IGFL4Q6B9Z1 124 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 LYPD5Q6UWN5 251 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 Q6ZSN1 163 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 Q6ZSV7 163 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 FAM19A1Q7Z5A9 133 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 PRR15Q8IV56 129 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 FAM223AQ8IWN6 122 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 C20orf197Q8N268 126 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 ZFAND2AQ8N6M9 145 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 WFDC11Q8NEX6 87 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 NUP37Q8NFH4 326 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 NPBQ8NG41 125 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 FAM110DQ8TAY7 271 aaPredicted RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 LINC00308Q8TCZ7 52 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 BRK1Q8WUW1 75 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 ITLN2Q8WWU7 325 aaPredicted RBP1.99□□□□□ -2.09
MDC1-208ENST00000494654 KAAG1Q9UBP8 84 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 LAMTOR3Q9UHA4 124 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 ZNF580Q9UK33 172 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 FLNCQ14315 2725 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 BOD1L1Q8NFC6 3051 aa1.99□□□□□ -2.09
MDC1-208ENST00000494654 FBN2P35556 2912 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 C2CD3Q4AC94 2353 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 POLQO75417 2590 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 TRAV13-2A0A0B4J235 113 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 TRAV12-3A0A0B4J271 114 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 IBA57-AS1B1ANH7 110 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 BUB1B-PAK6H3BSN5 160 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 SOCS3O14543 225 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 BLCAPP62952 87 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 CD164Q04900 197 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 CIRBPQ14011 172 aaKnown RBP1.98□□□□□ -2.09
MDC1-208ENST00000494654 C15orf32Q32M92 178 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 ADAMTSL4-AS1Q5T5F5 129 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 SPINK14Q6IE38 97 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 Q6ZRU5 148 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 FAM19A3Q7Z5A8 133 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 VMO1Q7Z5L0 202 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 LY6G5BQ8NDX9 201 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 SAP25Q8TEE9 199 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 FAM218AQ96MZ4 157 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 LINC00167Q96N53 147 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 LINC00846Q9NV44 126 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 KNL1Q8NG31 2342 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 ICE1Q9Y2F5 2266 aa1.98□□□□□ -2.09
MDC1-208ENST00000494654 ZFHX3Q15911 3703 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 BSNQ9UPA5 3926 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 IGLV5-39A0A0G2JS06 123 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 CLPSL1A2RUU4 121 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 ODF3BA8MYP8 253 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 KLLNB2CW77 178 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 F8WEM9 126 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 JMJD7-PLA2G4BH0Y9G9 81 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 M0R1B8 84 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 ERC2-IT1O76042 136 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 CCKP06307 115 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 CTSGP08311 255 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 GNLYP22749 145 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 NDPQ00604 133 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 LCE5AQ5TCM9 118 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 HIST2H2BDQ6DRA6 164 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 SOSTDC1Q6X4U4 206 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 Q8N6K4 173 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 CNEP1R1Q8N9A8 125 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 C9orf106Q8NAJ2 232 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 DEFB108BQ8NET1 73 aa1.97□□□□□ -2.09
MDC1-208ENST00000494654 OPRPNQ99935 248 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms