RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ORMDL2Q53FV1 153 aa11.91□□□□□ -0.5
PDLIM7-208ENST00000493815 CDC42SE2Q9NRR3 84 aa11.91□□□□□ -0.5
PDLIM7-208ENST00000493815 MIAQ16674 131 aa11.9□□□□□ -0.5
PDLIM7-208ENST00000493815 C2orf66Q6UXQ4 117 aa11.9□□□□□ -0.5
PDLIM7-208ENST00000493815 Q6ZUT4 128 aa11.9□□□□□ -0.5
PDLIM7-208ENST00000493815 FA2HQ7L5A8 372 aa11.9□□□□□ -0.5
PDLIM7-208ENST00000493815 ZNF664Q8N3J9 261 aa11.9□□□□□ -0.5
PDLIM7-208ENST00000493815 MAPKAPK5-AS1Q8N8E1 139 aa11.9□□□□□ -0.5
PDLIM7-208ENST00000493815 URB1-AS1Q96HZ7 61 aa11.9□□□□□ -0.5
PDLIM7-208ENST00000493815 C1orf43Q9BWL3 253 aa11.9□□□□□ -0.5
PDLIM7-208ENST00000493815 FAM104AQ969W3 186 aa11.89□□□□□ -0.51
PDLIM7-208ENST00000493815 K7EMI3 77 aa11.88□□□□□ -0.51
PDLIM7-208ENST00000493815 RMI2Q96E14 147 aa11.88□□□□□ -0.51
PDLIM7-208ENST00000493815 TM2D2Q9BX73 214 aa11.88□□□□□ -0.51
PDLIM7-208ENST00000493815 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
PDLIM7-208ENST00000493815 CYSLTR1Q9Y271 337 aa11.87□□□□□ -0.51
PDLIM7-208ENST00000493815 CSDC2Q9Y534 153 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-208ENST00000493815 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
PDLIM7-208ENST00000493815 LECT2O14960 151 aa11.87□□□□□ -0.51
PDLIM7-208ENST00000493815 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
PDLIM7-208ENST00000493815 EPPK1P58107 5090 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-208ENST00000493815 LINC00614P0C842 121 aa11.86□□□□□ -0.51
PDLIM7-208ENST00000493815 SMAGPQ0VAQ4 97 aa11.86□□□□□ -0.51
PDLIM7-208ENST00000493815 WFDC2Q14508 124 aa11.86□□□□□ -0.51
PDLIM7-208ENST00000493815 BAALCQ8WXS3 180 aa11.86□□□□□ -0.51
PDLIM7-208ENST00000493815 PKD1P98161 4303 aa11.86□□□□□ -0.51
PDLIM7-208ENST00000493815 HECTD4Q9Y4D8 3996 aa11.85□□□□□ -0.51
PDLIM7-208ENST00000493815 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
PDLIM7-208ENST00000493815 PMCHL1Q16048 86 aa11.85□□□□□ -0.51
PDLIM7-208ENST00000493815 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
PDLIM7-208ENST00000493815 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
PDLIM7-208ENST00000493815 A0A087WTM6 91 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 LINC00959A0A1B0GUT2 108 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 A0A1B0GVY2 172 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 DNAH11Q96DT5 4516 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 TRAV8-4A0A0B4J246 113 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 FUSP35637 526 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 CHCHD10Q8WYQ3 142 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 TOMM6Q96B49 74 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 PYGO1Q9Y3Y4 419 aa11.84□□□□□ -0.51
PDLIM7-208ENST00000493815 IGLV4-3A0A075B6K6 122 aa11.83□□□□□ -0.52
PDLIM7-208ENST00000493815 ZC2HC1BQ5TFG8 222 aa11.83□□□□□ -0.52
PDLIM7-208ENST00000493815 IGIPA6NJ69 53 aa11.82□□□□□ -0.52
PDLIM7-208ENST00000493815 XCL1P47992 114 aa11.82□□□□□ -0.52
PDLIM7-208ENST00000493815 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
PDLIM7-208ENST00000493815 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-208ENST00000493815 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
PDLIM7-208ENST00000493815 A0A096LNJ9 63 aa11.81□□□□□ -0.52
PDLIM7-208ENST00000493815 CCL25O15444 150 aa11.81□□□□□ -0.52
PDLIM7-208ENST00000493815 RAB5BP61020 215 aa11.81□□□□□ -0.52
PDLIM7-208ENST00000493815 TMEM141Q96I45 108 aa11.81□□□□□ -0.52
PDLIM7-208ENST00000493815 SCGB3A1Q96QR1 104 aa11.81□□□□□ -0.52
PDLIM7-208ENST00000493815 G0S2P27469 103 aa11.8□□□□□ -0.52
PDLIM7-208ENST00000493815 KRTAP10-2P60368 255 aa11.8□□□□□ -0.52
PDLIM7-208ENST00000493815 PKHD1P08F94 4074 aa11.8□□□□□ -0.52
PDLIM7-208ENST00000493815 SS18Q15532 418 aa11.79□□□□□ -0.52
PDLIM7-208ENST00000493815 SPATA12Q7Z6I5 190 aa11.79□□□□□ -0.52
PDLIM7-208ENST00000493815 IFITM10A6NMD0 228 aa11.78□□□□□ -0.52
PDLIM7-208ENST00000493815 ERASQ7Z444 233 aa11.78□□□□□ -0.52
PDLIM7-208ENST00000493815 EREGO14944 169 aa11.78□□□□□ -0.52
PDLIM7-208ENST00000493815 LINC00310P59036 64 aa11.78□□□□□ -0.52
PDLIM7-208ENST00000493815 FOXI1Q12951 378 aa11.78□□□□□ -0.52
PDLIM7-208ENST00000493815 TEX43Q6ZNM6 134 aa11.78□□□□□ -0.52
PDLIM7-208ENST00000493815 TIMM17AQ99595 171 aa11.78□□□□□ -0.52
PDLIM7-208ENST00000493815 C1orf196B1AJZ1 125 aa11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 USP17L23D6RBM5 183 aa11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 SERF1AO75920 110 aa11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 HBDP02042 147 aa11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 Q6ZN92 141 aa11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 Q8N814 137 aa11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 VCX2Q9H322 139 aa11.77□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BKO60814 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BJP06899 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BOP23527 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BBP33778 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BDP58876 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BCP62807 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST2H2BEQ16778 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BHQ93079 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BNQ99877 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 HIST1H2BMQ99879 126 aa11.76□□□□□ -0.53
PDLIM7-208ENST00000493815 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.75□□□□□ -0.53
PDLIM7-208ENST00000493815 NUPR1O60356 82 aa11.75□□□□□ -0.53
PDLIM7-208ENST00000493815 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
PDLIM7-208ENST00000493815 AMELXQ99217 191 aa11.75□□□□□ -0.53
PDLIM7-208ENST00000493815 CD164L2Q6UWJ8 174 aa11.75□□□□□ -0.53
PDLIM7-208ENST00000493815 HSBP1O75506 76 aa11.74□□□□□ -0.53
PDLIM7-208ENST00000493815 NPSP0C0P6 89 aa11.73□□□□□ -0.53
PDLIM7-208ENST00000493815 PDZD11Q5EBL8 140 aa11.73□□□□□ -0.53
PDLIM7-208ENST00000493815 C2orf88Q9BSF0 95 aa11.73□□□□□ -0.53
PDLIM7-208ENST00000493815 LINC01549A6NIU2 74 aa11.72□□□□□ -0.53
PDLIM7-208ENST00000493815 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.72□□□□□ -0.53
PDLIM7-208ENST00000493815 UBE2D1P51668 147 aa11.72□□□□□ -0.53
PDLIM7-208ENST00000493815 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
PDLIM7-208ENST00000493815 COX6A2Q02221 97 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms