RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 BAHCC1Q9P281 2608 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 TRAV13-1A0A0B4J241 112 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 TRAV12-3A0A0B4J271 114 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 USP17L23D6RBM5 183 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 OXTP01178 125 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 LINC01561Q8N1V8 128 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 Q8N2B8 174 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 CDKN2A-AS1Q9UH64 79 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 TLN1Q9Y490 2541 aaKnown RBP4.88□□□□□ -1.63
EWSR1-220ENST00000493426 BOD1L1Q8NFC6 3051 aa4.88□□□□□ -1.63
EWSR1-220ENST00000493426 UBR5O95071 2799 aaPredicted RBP4.87□□□□□ -1.63
EWSR1-220ENST00000493426 IGHV3-53P01767 116 aa4.87□□□□□ -1.63
EWSR1-220ENST00000493426 SYNJ2BPP57105 145 aa4.87□□□□□ -1.63
EWSR1-220ENST00000493426 DEFB1P60022 68 aa4.87□□□□□ -1.63
EWSR1-220ENST00000493426 FAM74A4Q5TZK3 123 aa4.87□□□□□ -1.63
EWSR1-220ENST00000493426 FAM218AQ96MZ4 157 aa4.87□□□□□ -1.63
EWSR1-220ENST00000493426 LINC00167Q96N53 147 aa4.87□□□□□ -1.63
EWSR1-220ENST00000493426 COL6A6A6NMZ7 2263 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 ZNF462Q96JM2 2506 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 TRAV12-2A0A075B6T6 113 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 TMEM89A2RUT3 159 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 K7EQG2 157 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 DNAL4O96015 105 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 IGLV1-40P01703 118 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 ZFP36P26651 326 aaKnown RBP4.86□□□□□ -1.63
EWSR1-220ENST00000493426 SAA4P35542 130 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 KLRB1Q12918 225 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 LINC00242Q5T6M2 205 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 CYSTM1Q9H1C7 97 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 Q9H8V8 135 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 LINC00846Q9NV44 126 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 PRO0628Q9UI54 55 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
EWSR1-220ENST00000493426 MYO18BQ8IUG5 2567 aa4.85□□□□□ -1.63
EWSR1-220ENST00000493426 FLNCQ14315 2725 aa4.85□□□□□ -1.63
EWSR1-220ENST00000493426 ASH1LQ9NR48 2969 aaKnown RBP4.85□□□□□ -1.63
EWSR1-220ENST00000493426 A8MZ25 164 aa4.85□□□□□ -1.63
EWSR1-220ENST00000493426 SMIM1B2RUZ4 78 aa4.85□□□□□ -1.63
EWSR1-220ENST00000493426 TRBV12-3P01733 135 aa4.85□□□□□ -1.63
EWSR1-220ENST00000493426 CCKP06307 115 aa4.85□□□□□ -1.63
EWSR1-220ENST00000493426 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.85□□□□□ -1.63
EWSR1-220ENST00000493426 PRRC2CQ9Y520 2896 aaKnown RBP4.84□□□□□ -1.63
EWSR1-220ENST00000493426 ABCA4P78363 2273 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 IGHV3OR16-12A0A075B7B8 117 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 JMJD7-PLA2G4BH0Y9G9 81 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 RS1O15537 224 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 NPC2P61916 151 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 SNRPD3P62318 126 aaKnown RBP4.84□□□□□ -1.63
EWSR1-220ENST00000493426 COX6A2Q02221 97 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 CFHR3Q02985 330 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 C4orf26Q17RF5 130 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 DEFB104AQ8WTQ1 72 aa4.84□□□□□ -1.63
EWSR1-220ENST00000493426 SPTA1P02549 2419 aa4.84□□□□□ -1.64
EWSR1-220ENST00000493426 SETXQ7Z333 2677 aaKnown RBP4.83□□□□□ -1.64
EWSR1-220ENST00000493426 ROS1P08922 2347 aa4.83□□□□□ -1.64
EWSR1-220ENST00000493426 SMIM26A0A096LP01 95 aa4.83□□□□□ -1.64
EWSR1-220ENST00000493426 F8WDY8 70 aa4.83□□□□□ -1.64
EWSR1-220ENST00000493426 BBC3Q96PG8 261 aaPredicted RBP4.83□□□□□ -1.64
EWSR1-220ENST00000493426 DSCR8Q96T75 97 aa4.83□□□□□ -1.64
EWSR1-220ENST00000493426 ARHGAP32A7KAX9 2087 aa4.83□□□□□ -1.64
EWSR1-220ENST00000493426 POLEQ07864 2286 aa4.83□□□□□ -1.64
EWSR1-220ENST00000493426 PKDREJQ9NTG1 2253 aa4.83□□□□□ -1.64
EWSR1-220ENST00000493426 IGKV2-28A0A075B6P5 120 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 TRAV7A0A075B6U4 112 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 IGKV3D-7A0A0C4DH55 119 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 A0A1W2PRX2 142 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 A6NDX4 124 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 LY6G6DO95868 133 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 IGKV2D-28P01615 120 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 CRPP02741 224 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 LMO4P61968 165 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 KLKP1Q107X0 134 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 FHL2Q14192 279 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 HRCT1Q6UXD1 115 aa4.82□□□□□ -1.64
EWSR1-220ENST00000493426 BSNQ9UPA5 3926 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.81□□□□□ -1.64
EWSR1-220ENST00000493426 TRBV10-1A0A0K0K1A3 114 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 FAM236DA0A1B0GTK5 79 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 IGKV2-29A2NJV5 120 aaPredicted RBP4.81□□□□□ -1.64
EWSR1-220ENST00000493426 RBMY1BA6NDE4 496 aaKnown RBP4.81□□□□□ -1.64
EWSR1-220ENST00000493426 RBMY1EA6NEQ0 496 aaKnown RBP4.81□□□□□ -1.64
EWSR1-220ENST00000493426 IBA57-AS1B1ANH7 110 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 CCL21O00585 134 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 NDUFC1O43677 76 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 RBMY1DP0C7P1 496 aaKnown RBP4.81□□□□□ -1.64
EWSR1-220ENST00000493426 RBMY1A1P0DJD3 496 aaKnown RBP4.81□□□□□ -1.64
EWSR1-220ENST00000493426 RBMY1CP0DJD4 496 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 FAM236CP0DP71 79 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 PFN2P35080 140 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 XCL1P47992 114 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 RBMY1FQ15415 496 aaKnown RBP4.81□□□□□ -1.64
EWSR1-220ENST00000493426 Q6ZSN1 163 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 LINC00337Q8N6G1 96 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 LINC01560Q8TB33 94 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 SMIM11BQ8TCY0 68 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 Q9HAA7 133 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 XCL2Q9UBD3 114 aa4.81□□□□□ -1.64
EWSR1-220ENST00000493426 FLNBO75369 2602 aaKnown RBP4.8□□□□□ -1.64
EWSR1-220ENST00000493426 H7BZZ5 65 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms