RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 SPTSSBQ8NFR3 76 aa-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 AMELXQ99217 191 aa-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 LINC00472Q9H8W2 130 aa-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 NPVFQ9HCQ7 196 aa-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 SONP18583 2426 aaKnown RBP-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 SVEP1Q4LDE5 3571 aa-0.66□□□□□ -2.51
SYCP1-208ENST00000493377 PKHD1P08F94 4074 aa-0.66□□□□□ -2.51
SYCP1-208ENST00000493377 CEP152O94986 1710 aa-0.66□□□□□ -2.51
SYCP1-208ENST00000493377 M0R135 149 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 SPRR2AP35326 72 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 CKS1BP61024 79 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 HAMPP81172 84 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 SPAG11AQ6PDA7 123 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 PYDC1Q8WXC3 89 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 LENEPQ9Y5L5 61 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 TGP01266 2768 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 KIF21AQ7Z4S6 1674 aa-0.66□□□□□ -2.52
SYCP1-208ENST00000493377 HCG22E2RYF7 251 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 SNCGO76070 127 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 PPP1R17O96001 155 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 COX6B1P14854 86 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 SPRR1BP22528 89 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 KRTAP6-2Q3LI66 62 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 PIGYQ3MUY2 71 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 DEFB123Q8N688 67 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 SDF2Q99470 211 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 SMIM3Q9BZL3 60 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 WDR7Q9Y4E6 1490 aa-0.67□□□□□ -2.52
SYCP1-208ENST00000493377 HECTD1Q9ULT8 2610 aa-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 KDM5AP29375 1690 aaKnown RBP-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 USP9YO00507 2555 aaPredicted RBP-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 M0R2Z0 102 aa-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 COX17Q14061 63 aa-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 MYOM3Q5VTT5 1437 aa-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 ARAP2Q8WZ64 1704 aa-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 TMEM191AQ9H0A3 160 aa-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 RNF213Q63HN8 5207 aa-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 TEP1Q99973 2627 aaKnown RBP-0.68□□□□□ -2.52
SYCP1-208ENST00000493377 RIMS1Q86UR5 1692 aaKnown RBP-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 ANKRD30AQ9BXX3 1397 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 TRAV13-2A0A0B4J235 113 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 S100A7L2Q5SY68 101 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 KCNRGQ8N5I3 272 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 TCEAL4Q96EI5 215 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 DPH3Q96FX2 82 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 SEC11CQ9BY50 192 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 RAPGEF6Q8TEU7 1601 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 PSME4Q14997 1843 aa-0.69□□□□□ -2.52
SYCP1-208ENST00000493377 PCNX1Q96RV3 2341 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 FASNP49327 2511 aaKnown RBP-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 RYR2Q92736 4967 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 PPIP5K1Q6PFW1 1433 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 BIRC6Q9NR09 4857 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 CTXND1A0A1B0GTU2 59 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 K7ERU9 68 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 ARPC5O15511 151 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 RPS25P62851 125 aaKnown RBP-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 TMEM170BQ5T4T1 132 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 Q6AWC8 147 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 Q6JHZ5 121 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 MYH7P12883 1935 aa-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 TNRC18O15417 2968 aaPredicted RBP-0.7□□□□□ -2.52
SYCP1-208ENST00000493377 ITPR3Q14573 2671 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 TCHHQ07283 1943 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 GRIN2AQ12879 1464 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 GAPVD1Q14C86 1478 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 FXYD6-FXYD2A0A087WZ82 144 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 PIGBOS1A0A0B4J2F0 54 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 UQCR11O14957 56 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 TPPP2P59282 170 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 C10orf128Q5T292 105 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 C12orf73Q69YU5 71 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 AQP10Q96PS8 301 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 CCDC167Q9P0B6 97 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 V9GYH0 126 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 TULP4Q9NRJ4 1543 aa-0.71□□□□□ -2.52
SYCP1-208ENST00000493377 CFTRP13569 1480 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 IQSEC2Q5JU85 1478 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 M0R2T5 61 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 SPINK4O60575 86 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 COPZ1P61923 177 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 DEFA5Q01523 94 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 DR1Q01658 176 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 SMCO1Q147U7 214 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 AKAP14Q86UN6 197 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 BAGE2Q86Y30 109 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 Q8N8P6 123 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 COPZ2Q9P299 210 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 BICRAQ9NZM4 1560 aa-0.72□□□□□ -2.52
SYCP1-208ENST00000493377 MYOM1P52179 1685 aa-0.72□□□□□ -2.53
SYCP1-208ENST00000493377 SHANK2Q9UPX8 1470 aa-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 BTAF1O14981 1849 aa-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 F8VRH5 84 aa-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 SMIM21Q3B7S5 101 aa-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 TTC9CQ8N5M4 171 aa-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 ANP32BQ92688 251 aaKnown RBP-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 NDUFA4L2Q9NRX3 87 aa-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 LINC01558Q9Y6Z2 57 aa-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 EPG5Q9HCE0 2579 aa-0.73□□□□□ -2.53
SYCP1-208ENST00000493377 SHROOM2Q13796 1616 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms