RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TTTY13Q9BZ97 58 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 TRBV25-1A0A075B6N4 114 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 A8MZ25 164 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 HSD52Q0P140 79 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 TMEM170BQ5T4T1 132 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 FAM222AQ5U5X8 452 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 MAPKAPK5-AS1Q8N8E1 139 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 CHAC1Q9BUX1 264 aa9.92□□□□□ -0.82
PTPN7-216ENST00000492977 CSDC2Q9Y534 153 aaKnown RBP9.92□□□□□ -0.82
PTPN7-216ENST00000492977 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
PTPN7-216ENST00000492977 LOC100131303A0A0U1RQF7 123 aa9.91□□□□□ -0.82
PTPN7-216ENST00000492977 KRTAP10-11P60412 298 aa9.91□□□□□ -0.82
PTPN7-216ENST00000492977 DGAT2L7PQ6IED9 249 aa9.91□□□□□ -0.82
PTPN7-216ENST00000492977 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
PTPN7-216ENST00000492977 A0A0J9YXV3 536 aa9.9□□□□□ -0.82
PTPN7-216ENST00000492977 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
PTPN7-216ENST00000492977 H7C423 109 aa9.9□□□□□ -0.82
PTPN7-216ENST00000492977 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
PTPN7-216ENST00000492977 Q8NAQ8 132 aa9.9□□□□□ -0.82
PTPN7-216ENST00000492977 Q6ZUT4 128 aa9.89□□□□□ -0.83
PTPN7-216ENST00000492977 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
PTPN7-216ENST00000492977 TRRAPQ9Y4A5 3859 aa9.88□□□□□ -0.83
PTPN7-216ENST00000492977 TINCRA0A1B0GVN0 87 aa9.88□□□□□ -0.83
PTPN7-216ENST00000492977 ZNF22P17026 224 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-216ENST00000492977 SEC11AP67812 179 aa9.88□□□□□ -0.83
PTPN7-216ENST00000492977 PRO0255Q9UI72 69 aa9.88□□□□□ -0.83
PTPN7-216ENST00000492977 TMEM223A0PJW6 202 aa9.88□□□□□ -0.83
PTPN7-216ENST00000492977 LORP23490 312 aaPredicted RBP9.88□□□□□ -0.83
PTPN7-216ENST00000492977 UBE2L6O14933 153 aa9.87□□□□□ -0.83
PTPN7-216ENST00000492977 SPART-AS1P0CW21 52 aa9.87□□□□□ -0.83
PTPN7-216ENST00000492977 DAD1P61803 113 aa9.87□□□□□ -0.83
PTPN7-216ENST00000492977 RNASE13Q5GAN3 156 aaKnown RBP9.87□□□□□ -0.83
PTPN7-216ENST00000492977 ORAOV1Q8WV07 137 aa9.87□□□□□ -0.83
PTPN7-216ENST00000492977 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
PTPN7-216ENST00000492977 DEFB4AO15263 64 aa9.86□□□□□ -0.83
PTPN7-216ENST00000492977 GYPEP15421 78 aa9.86□□□□□ -0.83
PTPN7-216ENST00000492977 UBE2D1P51668 147 aa9.86□□□□□ -0.83
PTPN7-216ENST00000492977 TAL2Q16559 108 aa9.86□□□□□ -0.83
PTPN7-216ENST00000492977 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
PTPN7-216ENST00000492977 LEPROTO15243 131 aa9.85□□□□□ -0.83
PTPN7-216ENST00000492977 TIRAPP58753 221 aa9.85□□□□□ -0.83
PTPN7-216ENST00000492977 AMMECR1LQ6DCA0 310 aa9.85□□□□□ -0.83
PTPN7-216ENST00000492977 OR5A1Q8NGJ0 315 aa9.85□□□□□ -0.83
PTPN7-216ENST00000492977 TMEM101Q96IK0 257 aa9.85□□□□□ -0.83
PTPN7-216ENST00000492977 FBN1P35555 2871 aaKnown RBP9.85□□□□□ -0.83
PTPN7-216ENST00000492977 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 A6NDN8 102 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 J3QQQ9 107 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 PAX4O43316 350 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 ZNF25P17030 456 aaPredicted RBP9.84□□□□□ -0.83
PTPN7-216ENST00000492977 FAM19A3Q7Z5A8 133 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 PLEKHB2Q96CS7 222 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 CDC42SE2Q9NRR3 84 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 ATP5G1P05496 136 aa9.84□□□□□ -0.83
PTPN7-216ENST00000492977 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
PTPN7-216ENST00000492977 LGALS3P17931 250 aaKnown RBP9.83□□□□□ -0.84
PTPN7-216ENST00000492977 TM2D2Q9BX73 214 aa9.83□□□□□ -0.84
PTPN7-216ENST00000492977 CELA1Q9UNI1 258 aa9.83□□□□□ -0.84
PTPN7-216ENST00000492977 IGLV5-45A0A087WSX0 123 aa9.82□□□□□ -0.84
PTPN7-216ENST00000492977 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
PTPN7-216ENST00000492977 CEND1Q8N111 149 aa9.82□□□□□ -0.84
PTPN7-216ENST00000492977 COX11Q9Y6N1 276 aa9.82□□□□□ -0.84
PTPN7-216ENST00000492977 G3V4G9 280 aa9.81□□□□□ -0.84
PTPN7-216ENST00000492977 TAX1BP3O14907 124 aa9.81□□□□□ -0.84
PTPN7-216ENST00000492977 GCSHP23434 173 aa9.81□□□□□ -0.84
PTPN7-216ENST00000492977 HERVK_113P63121 156 aa9.81□□□□□ -0.84
PTPN7-216ENST00000492977 SCGB1D4Q6XE38 83 aa9.81□□□□□ -0.84
PTPN7-216ENST00000492977 HIST1H4GQ99525 98 aa9.81□□□□□ -0.84
PTPN7-216ENST00000492977 IGHV1-58A0A0C4DH39 117 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 H3BRM9 83 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 H3BS24 57 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 VSIG2Q96IQ7 327 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 CHCHD5Q9BSY4 110 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 STAB1Q9NY15 2570 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 IGHV3-30-3P0DP02 117 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 GAGE6Q13070 117 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 LINC00242Q5T6M2 205 aa9.8□□□□□ -0.84
PTPN7-216ENST00000492977 TRAV26-1A0A087WT03 109 aa9.79□□□□□ -0.84
PTPN7-216ENST00000492977 A0A0J9YY99 117 aa9.79□□□□□ -0.84
PTPN7-216ENST00000492977 F5H768 121 aa9.79□□□□□ -0.84
PTPN7-216ENST00000492977 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
PTPN7-216ENST00000492977 IGHV3-64A0A075B6Q5 118 aa9.78□□□□□ -0.84
PTPN7-216ENST00000492977 TRAV13-1A0A0B4J241 112 aa9.78□□□□□ -0.84
PTPN7-216ENST00000492977 PTTG1IPP53801 180 aa9.78□□□□□ -0.84
PTPN7-216ENST00000492977 FXYD2P54710 66 aa9.78□□□□□ -0.84
PTPN7-216ENST00000492977 CDKN2A-AS1Q9UH64 79 aa9.78□□□□□ -0.84
PTPN7-216ENST00000492977 TRAV8-3A0A0A6YYJ7 113 aa9.77□□□□□ -0.85
PTPN7-216ENST00000492977 MAST4O15021 2626 aa9.77□□□□□ -0.85
PTPN7-216ENST00000492977 COX6A2Q02221 97 aa9.77□□□□□ -0.85
PTPN7-216ENST00000492977 SH2D6Q7Z4S9 175 aa9.77□□□□□ -0.85
PTPN7-216ENST00000492977 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
PTPN7-216ENST00000492977 A0A1B0GUV1 79 aa9.76□□□□□ -0.85
PTPN7-216ENST00000492977 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
PTPN7-216ENST00000492977 SMIM13P0DJ93 91 aa9.76□□□□□ -0.85
PTPN7-216ENST00000492977 SRSF9Q13242 221 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPN7-216ENST00000492977 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
PTPN7-216ENST00000492977 Q6ZVH6 145 aa9.76□□□□□ -0.85
PTPN7-216ENST00000492977 C11orf68Q9H3H3 251 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms