RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 PLXNB2O15031 1838 aa0.09□□□□□ -2.39
CLK1-213ENST00000492793 UQCR11O14957 56 aa0.09□□□□□ -2.4
CLK1-213ENST00000492793 IFITM1P13164 125 aa0.09□□□□□ -2.4
CLK1-213ENST00000492793 NALCNQ8IZF0 1738 aa0.09□□□□□ -2.4
CLK1-213ENST00000492793 C2CD3Q4AC94 2353 aa0.09□□□□□ -2.4
CLK1-213ENST00000492793 UBE2L5PA0A1B0GUS4 154 aa0.08□□□□□ -2.4
CLK1-213ENST00000492793 GNG4P50150 75 aa0.08□□□□□ -2.4
CLK1-213ENST00000492793 PPP3R1P63098 170 aa0.08□□□□□ -2.4
CLK1-213ENST00000492793 UBE2L3P68036 154 aaKnown RBP0.08□□□□□ -2.4
CLK1-213ENST00000492793 COX17Q14061 63 aa0.08□□□□□ -2.4
CLK1-213ENST00000492793 MYOZ3Q8TDC0 251 aa0.08□□□□□ -2.4
CLK1-213ENST00000492793 GNG8Q9UK08 70 aa0.08□□□□□ -2.4
CLK1-213ENST00000492793 WNK3Q9BYP7 1800 aa0.08□□□□□ -2.4
CLK1-213ENST00000492793 PLCE1Q9P212 2302 aa0.08□□□□□ -2.4
CLK1-213ENST00000492793 LOC285095A0A1B0GVY8 99 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 FAM24AA6NFZ4 105 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 CHKB-CPT1BH3BT56 60 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 S100A1P23297 94 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 Q6JHZ5 121 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 TMEM203Q969S6 136 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 PSME4Q14997 1843 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 MYOM2P54296 1465 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
CLK1-213ENST00000492793 KDM3BQ7LBC6 1761 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 LRP6O75581 1613 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 LAMC1P11047 1609 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 SMG6Q86US8 1419 aaKnown RBP0.06□□□□□ -2.4
CLK1-213ENST00000492793 PTPRQQ9UMZ3 2332 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 TRAV22A0A0B4J277 110 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 SFT2D2O95562 160 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 APOC3P02656 99 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 SVBPQ8N300 66 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 SPCS1Q9Y6A9 102 aa0.06□□□□□ -2.4
CLK1-213ENST00000492793 UBR5O95071 2799 aaPredicted RBP0.06□□□□□ -2.4
CLK1-213ENST00000492793 C10orf71Q711Q0 1435 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 UNC79Q9P2D8 2635 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 RIMS1Q86UR5 1692 aaKnown RBP0.05□□□□□ -2.4
CLK1-213ENST00000492793 LRRC37A2A6NM11 1700 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 CELSR1Q9NYQ6 3014 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 M0R3E3 92 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 CFDP00746 253 aaPredicted RBP0.05□□□□□ -2.4
CLK1-213ENST00000492793 S100A3P33764 101 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 GNG11P61952 73 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 CDC42SE2Q9NRR3 84 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 ERCC6L2Q5T890 1561 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 CUL7Q14999 1698 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 KIF21AQ7Z4S6 1674 aa0.05□□□□□ -2.4
CLK1-213ENST00000492793 CSMD3Q7Z407 3707 aa0.04□□□□□ -2.4
CLK1-213ENST00000492793 AKAP6Q13023 2319 aa0.04□□□□□ -2.4
CLK1-213ENST00000492793 COL7A1Q02388 2944 aa0.04□□□□□ -2.4
CLK1-213ENST00000492793 ATP5EP56381 51 aaPredicted RBP0.04□□□□□ -2.4
CLK1-213ENST00000492793 DCDP81605 110 aaKnown RBP0.04□□□□□ -2.4
CLK1-213ENST00000492793 Q8IZM0 81 aa0.04□□□□□ -2.4
CLK1-213ENST00000492793 TP53AIP1Q9HCN2 124 aa0.04□□□□□ -2.4
CLK1-213ENST00000492793 BIVM-ERCC5R4GMW8 1640 aa0.04□□□□□ -2.4
CLK1-213ENST00000492793 SCAPERQ9BY12 1400 aa0.04□□□□□ -2.4
CLK1-213ENST00000492793 CHD9Q3L8U1 2897 aa0.04□□□□□ -2.4
CLK1-213ENST00000492793 WNK2Q9Y3S1 2297 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 SHROOM2Q13796 1616 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 I3L2K1 104 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 IGLC1P0CG04 106 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 MRPS10P82664 201 aaKnown RBP0.03□□□□□ -2.4
CLK1-213ENST00000492793 WFDC2Q14508 124 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 MYO7BQ6PIF6 2116 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 FAM167A-AS1Q96KT0 104 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 NXT2Q9NPJ8 142 aaKnown RBP0.03□□□□□ -2.4
CLK1-213ENST00000492793 UQCR10Q9UDW1 63 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 USF3Q68DE3 2245 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 PKDREJQ9NTG1 2253 aa0.03□□□□□ -2.4
CLK1-213ENST00000492793 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.41
CLK1-213ENST00000492793 HIVEP3Q5T1R4 2406 aa0.03□□□□□ -2.41
CLK1-213ENST00000492793 GOLGA4Q13439 2230 aaKnown RBP0.02□□□□□ -2.41
CLK1-213ENST00000492793 SBF2Q86WG5 1849 aa0.02□□□□□ -2.41
CLK1-213ENST00000492793 Q0VG73 95 aa0.02□□□□□ -2.41
CLK1-213ENST00000492793 SPRR4Q96PI1 79 aa0.02□□□□□ -2.41
CLK1-213ENST00000492793 MANBALQ9NQG1 85 aa0.02□□□□□ -2.41
CLK1-213ENST00000492793 ARL2-SNX15V9GYD0 113 aa0.02□□□□□ -2.41
CLK1-213ENST00000492793 PZPP20742 1482 aa0.02□□□□□ -2.41
CLK1-213ENST00000492793 NHSL1Q5SYE7 1610 aa0.02□□□□□ -2.41
CLK1-213ENST00000492793 ZNF292O60281 2723 aa0.01□□□□□ -2.41
CLK1-213ENST00000492793 C10orf142B7Z368 130 aa0.01□□□□□ -2.41
CLK1-213ENST00000492793 MGPP08493 103 aa0.01□□□□□ -2.41
CLK1-213ENST00000492793 SFTA2Q6UW10 78 aa0.01□□□□□ -2.41
CLK1-213ENST00000492793 FAM223AQ8IWN6 122 aa0.01□□□□□ -2.41
CLK1-213ENST00000492793 NSD3Q9BZ95 1437 aa0.01□□□□□ -2.41
CLK1-213ENST00000492793 NCOA3Q9Y6Q9 1424 aa0.01□□□□□ -2.41
CLK1-213ENST00000492793 MYOM1P52179 1685 aa0.01□□□□□ -2.41
CLK1-213ENST00000492793 EIF4G3O43432 1585 aaKnown RBP0□□□□□ -2.41
CLK1-213ENST00000492793 SNCAP37840 140 aa0□□□□□ -2.41
CLK1-213ENST00000492793 UBE2D3P61077 147 aa0□□□□□ -2.41
CLK1-213ENST00000492793 UBE2D2P62837 147 aa0□□□□□ -2.41
CLK1-213ENST00000492793 HMGXB3Q12766 1538 aa0□□□□□ -2.41
CLK1-213ENST00000492793 ARHGEF5Q12774 1597 aa0□□□□□ -2.41
CLK1-213ENST00000492793 DEFB109BQ30KR1 87 aa0□□□□□ -2.41
CLK1-213ENST00000492793 Q5VSD8 79 aa0□□□□□ -2.41
CLK1-213ENST00000492793 GTF2H5Q6ZYL4 71 aa0□□□□□ -2.41
CLK1-213ENST00000492793 HMCN2Q8NDA2 5059 aa0□□□□□ -2.41
CLK1-213ENST00000492793 TMEM263Q8WUH6 116 aaKnown RBP0□□□□□ -2.41
CLK1-213ENST00000492793 FAIMQ9NVQ4 179 aa0□□□□□ -2.41
CLK1-213ENST00000492793 SHANK2Q9UPX8 1470 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms