RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 GAGE2DQ9UEU5 116 aa4.82□□□□□ -1.64
RBM39-237ENST00000492779 PHLDA3Q9Y5J5 127 aa4.82□□□□□ -1.64
RBM39-237ENST00000492779 TRBV7-1A0A0A6YYK4 115 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 IGHV3-30P01768 117 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 IGHV3-30-5P0DP03 117 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 S100A4P26447 101 aaKnown RBP4.81□□□□□ -1.64
RBM39-237ENST00000492779 MRPL23Q16540 153 aaKnown RBP4.81□□□□□ -1.64
RBM39-237ENST00000492779 FAM74A4Q5TZK3 123 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 MEGF8Q7Z7M0 2845 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 NDUFA7O95182 113 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 PSMB2P49721 201 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 UBE2D3P61077 147 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 UBE2D2P62837 147 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 MEIG1Q5JSS6 88 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 TRPT1Q86TN4 253 aaKnown RBP4.81□□□□□ -1.64
RBM39-237ENST00000492779 NDUFA11Q86Y39 141 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 MRAPQ8TCY5 172 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 DCANP1Q8TF63 244 aa4.81□□□□□ -1.64
RBM39-237ENST00000492779 ZNF256Q9Y2P7 627 aaPredicted RBP4.81□□□□□ -1.64
RBM39-237ENST00000492779 KLLNB2CW77 178 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 POM121L12Q8N7R1 296 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 OR10J6PQ8NGY7 276 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 IGHV3-73A0A0B4J1V6 119 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 TRAV21A0A0B4J279 112 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 SDHAF1A6NFY7 115 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 NXPH4O95158 308 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 SYNJ2BPP57105 145 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 Q6ZSN1 163 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 C10orf126Q8N4M7 172 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 C3orf56Q8N813 242 aa4.8□□□□□ -1.64
RBM39-237ENST00000492779 DLX4Q92988 240 aaPredicted RBP4.8□□□□□ -1.64
RBM39-237ENST00000492779 MRPL53Q96EL3 112 aaKnown RBP4.8□□□□□ -1.64
RBM39-237ENST00000492779 TRAV4A0A0B4J268 109 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 A0A0J9YXV3 536 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 HOXD3P31249 432 aaPredicted RBP4.79□□□□□ -1.64
RBM39-237ENST00000492779 ORMDL2Q53FV1 153 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 TTC32Q5I0X7 151 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 UBE2E2Q96LR5 201 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 SPANXDQ9BXN6 97 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 TGP01266 2768 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 TRAV8-3A0A0A6YYJ7 113 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 H7C2G1 150 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 J3KT08 172 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 M0QY20 66 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.645e-10■■■■□ 22.3
RBM39-237ENST00000492779 TMEM170BQ5T4T1 132 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 ADAMTSL4-AS1Q5T5F5 129 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 FAM19A5Q7Z5A7 132 aaPredicted RBP4.79□□□□□ -1.64
RBM39-237ENST00000492779 KIR2DL5BQ8NHK3 375 aa4.79□□□□□ -1.64
RBM39-237ENST00000492779 TRBV20-1A0A075B6N2 111 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 IGHV3-16A0A0C4DH30 117 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 KNCNA6PVL3 124 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 F5H697 171 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 NDUFA4O00483 81 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 LINC00694P0DN24 101 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 SPINK13Q1W4C9 94 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 TMEM101Q96IK0 257 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 FAM223BA6NKX1 122 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 M0R2P5 195 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 CCL24O00175 119 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 FAM223AQ8IWN6 122 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 SLC25A29Q8N8R3 303 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 TENM3Q9P273 2699 aa4.78□□□□□ -1.64
RBM39-237ENST00000492779 VCYO14598 125 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 SNCGO76070 127 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 NPC2P61916 151 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 PMVKQ15126 192 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 ANKRD29Q8N6D5 301 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 OR13C6PQ8NH95 151 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 USMG5Q96IX5 58 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 C9orf85Q96MD7 179 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 LITAFQ99732 161 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 PRKDCP78527 4128 aaKnown RBP4.77□□□□□ -1.65
RBM39-237ENST00000492779 COL7A1Q02388 2944 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 DNAH3Q8TD57 4116 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 TRBV27A0A0K0K1C4 114 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 TRBV7-7A0A0K0K1E9 115 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 RBMY1BA6NDE4 496 aaKnown RBP4.77□□□□□ -1.65
RBM39-237ENST00000492779 RBMY1EA6NEQ0 496 aaKnown RBP4.77□□□□□ -1.65
RBM39-237ENST00000492779 C9JAW5 83 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 F5H768 121 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 J3QQQ9 107 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 OVOL1O14753 267 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 RS1O15537 224 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 RBMY1DP0C7P1 496 aaKnown RBP4.77□□□□□ -1.65
RBM39-237ENST00000492779 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
RBM39-237ENST00000492779 MUSTN1Q8IVN3 82 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 C4orf3Q8WVX3 66 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 ODF3Q96PU9 254 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 LENEPQ9Y5L5 61 aa4.77□□□□□ -1.65
RBM39-237ENST00000492779 H3BUA1 57 aa4.76□□□□□ -1.65
RBM39-237ENST00000492779 HTN1P15515 57 aa4.76□□□□□ -1.65
RBM39-237ENST00000492779 DAND5Q8N907 189 aa4.76□□□□□ -1.65
RBM39-237ENST00000492779 TMEM263Q8WUH6 116 aaKnown RBP4.76□□□□□ -1.65
RBM39-237ENST00000492779 IGLV4-3A0A075B6K6 122 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms