RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 GLMPQ8WWB7 406 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 ZFAND3Q9H8U3 227 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 IGLV2-18A0A075B6J9 118 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 TRAV8-2A0A0B4J237 113 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 IGHV3-66A0A0C4DH42 116 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 LOC107984156A0A0G2JMH3 177 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 J3KT08 172 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 RPS28P62857 69 aaKnown RBP9.36□□□□□ -0.91
HDAC3-213ENST00000492506 LYZL1Q6UWQ5 148 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 ARL17AQ8IVW1 177 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 AMN1Q8IY45 258 aa9.36□□□□□ -0.91
HDAC3-213ENST00000492506 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
HDAC3-213ENST00000492506 K7EQG2 157 aa9.35□□□□□ -0.91
HDAC3-213ENST00000492506 HERVK_113P61574 105 aa9.35□□□□□ -0.91
HDAC3-213ENST00000492506 TRBV7-7A0A0K0K1E9 115 aa9.34□□□□□ -0.91
HDAC3-213ENST00000492506 SLC25A20O43772 301 aa9.34□□□□□ -0.91
HDAC3-213ENST00000492506 CDK2AP2O75956 126 aa9.34□□□□□ -0.91
HDAC3-213ENST00000492506 RPL11P62913 178 aaKnown RBP9.34□□□□□ -0.91
HDAC3-213ENST00000492506 LAGE3Q14657 143 aa9.34□□□□□ -0.91
HDAC3-213ENST00000492506 FAM159AQ6UWV7 190 aa9.34□□□□□ -0.91
HDAC3-213ENST00000492506 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
HDAC3-213ENST00000492506 ORM2P19652 201 aa9.33□□□□□ -0.92
HDAC3-213ENST00000492506 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
HDAC3-213ENST00000492506 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
HDAC3-213ENST00000492506 DCANP1Q8TF63 244 aa9.33□□□□□ -0.92
HDAC3-213ENST00000492506 RASL10AQ92737 203 aa9.33□□□□□ -0.92
HDAC3-213ENST00000492506 AAMDCQ9H7C9 122 aa9.33□□□□□ -0.92
HDAC3-213ENST00000492506 MRPL35Q9NZE8 188 aaKnown RBP9.33□□□□□ -0.92
HDAC3-213ENST00000492506 TRBV19A0A075B6N1 114 aa9.32□□□□□ -0.92
HDAC3-213ENST00000492506 DUSP14O95147 198 aaKnown RBP9.32□□□□□ -0.92
HDAC3-213ENST00000492506 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
HDAC3-213ENST00000492506 ACYP1P07311 99 aa9.32□□□□□ -0.92
HDAC3-213ENST00000492506 IGLC6P0CF74 106 aa9.32□□□□□ -0.92
HDAC3-213ENST00000492506 ATXN8Q156A1 80 aa9.32□□□□□ -0.92
HDAC3-213ENST00000492506 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
HDAC3-213ENST00000492506 TMEM101Q96IK0 257 aa9.32□□□□□ -0.92
HDAC3-213ENST00000492506 TCL1BO95988 128 aa9.31□□□□□ -0.92
HDAC3-213ENST00000492506 SRSF9Q13242 221 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC3-213ENST00000492506 TPPP3Q9BW30 176 aa9.31□□□□□ -0.92
HDAC3-213ENST00000492506 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 H3BT86 120 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 SH2D1AO60880 128 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 ID1P41134 155 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 TMEM170BQ5T4T1 132 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 C1orf134Q5TEV5 83 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 UBE2DNLQ8IWF7 75 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 C15orf53Q8NAA6 179 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 SGK494Q96LW2 274 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 PRO1854Q9UHT4 67 aa9.3□□□□□ -0.92
HDAC3-213ENST00000492506 A0A0B4J2C4 111 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 C16orf90A8MZG2 172 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 M0R2P5 195 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 UQCRQO14949 82 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 TNP2Q05952 138 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 SCGB1D4Q6XE38 83 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 Q8N1X5 172 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 LINC01587Q99440 93 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 SHANK2-AS3Q9BTD1 123 aa9.29□□□□□ -0.92
HDAC3-213ENST00000492506 MRPL36Q9P0J6 103 aaKnown RBP9.29□□□□□ -0.92
HDAC3-213ENST00000492506 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-213ENST00000492506 TRAV4A0A0B4J268 109 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 TRBV10-2A0A0K0K1G8 114 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 H3BMM0 161 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 H3BRN7 92 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 H3BVH4 76 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 MLANAQ16655 118 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 SIGLEC15Q6ZMC9 328 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 KIR2DL4Q99706 377 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 XCL2Q9UBD3 114 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 U3KQE9 123 aa9.28□□□□□ -0.92
HDAC3-213ENST00000492506 TRAV8-1A0A0A6YYK1 113 aa9.27□□□□□ -0.93
HDAC3-213ENST00000492506 SCGB2A1O75556 95 aa9.27□□□□□ -0.93
HDAC3-213ENST00000492506 PPP1R17O96001 155 aa9.27□□□□□ -0.93
HDAC3-213ENST00000492506 SPART-AS1P0CW21 52 aa9.27□□□□□ -0.93
HDAC3-213ENST00000492506 METTL26Q96S19 204 aa9.27□□□□□ -0.93
HDAC3-213ENST00000492506 CRIP1P50238 77 aa9.26□□□□□ -0.93
HDAC3-213ENST00000492506 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
HDAC3-213ENST00000492506 C9JAW5 83 aa9.25□□□□□ -0.93
HDAC3-213ENST00000492506 IGKV1-17P01599 117 aa9.25□□□□□ -0.93
HDAC3-213ENST00000492506 EMP1P54849 157 aa9.25□□□□□ -0.93
HDAC3-213ENST00000492506 LYZP61626 148 aa9.25□□□□□ -0.93
HDAC3-213ENST00000492506 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
HDAC3-213ENST00000492506 ODF3Q96PU9 254 aa9.25□□□□□ -0.93
HDAC3-213ENST00000492506 PRADC1Q9BSG0 188 aa9.25□□□□□ -0.93
HDAC3-213ENST00000492506 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
HDAC3-213ENST00000492506 DMBT1Q9UGM3 2413 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-213ENST00000492506 LINC01620Q4KN68 170 aa9.24□□□□□ -0.93
HDAC3-213ENST00000492506 C9orf153Q5TBE3 101 aa9.24□□□□□ -0.93
HDAC3-213ENST00000492506 FAM222AQ5U5X8 452 aa9.24□□□□□ -0.93
HDAC3-213ENST00000492506 ZFP2Q6ZN57 461 aa9.24□□□□□ -0.93
HDAC3-213ENST00000492506 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
HDAC3-213ENST00000492506 ZNRF2Q8NHG8 242 aa9.24□□□□□ -0.93
HDAC3-213ENST00000492506 TOMM6Q96B49 74 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms