RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 Q8N8P6 123 aa10.01□□□□□ -0.81
CDC42SE1-205ENST00000491825 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
CDC42SE1-205ENST00000491825 IGLV4-60A0A075B6I1 120 aa10□□□□□ -0.81
CDC42SE1-205ENST00000491825 CRPP02741 224 aa10□□□□□ -0.81
CDC42SE1-205ENST00000491825 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
CDC42SE1-205ENST00000491825 MYCBP2O75592 4640 aa10□□□□□ -0.81
CDC42SE1-205ENST00000491825 DNAH8Q96JB1 4490 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 LOC389332A0A1B0GUA5 103 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 EREGO14944 169 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 RAB5AP20339 215 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 SMAGPQ0VAQ4 97 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 MIAQ16674 131 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 Q9HAA7 133 aa9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 CSDC2Q9Y534 153 aaKnown RBP9.99□□□□□ -0.81
CDC42SE1-205ENST00000491825 EPM2AB3EWF7 344 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 KRTAP10-1P60331 282 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 ORMDL2Q53FV1 153 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 LINC00269Q8N2A0 174 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 RMI2Q96E14 147 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 TM2D2Q9BX73 214 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 COX11Q9Y6N1 276 aa9.98□□□□□ -0.81
CDC42SE1-205ENST00000491825 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
CDC42SE1-205ENST00000491825 COLCA2A8K830 154 aa9.97□□□□□ -0.81
CDC42SE1-205ENST00000491825 S100A1P23297 94 aa9.97□□□□□ -0.81
CDC42SE1-205ENST00000491825 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-205ENST00000491825 REG3AQ06141 175 aa9.97□□□□□ -0.81
CDC42SE1-205ENST00000491825 RNASEKQ6P5S7 137 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-205ENST00000491825 TMEM101Q96IK0 257 aa9.97□□□□□ -0.81
CDC42SE1-205ENST00000491825 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.82
CDC42SE1-205ENST00000491825 SPANXA1Q9NS26 97 aa9.96□□□□□ -0.82
CDC42SE1-205ENST00000491825 ATP6V1G1O75348 118 aa9.95□□□□□ -0.82
CDC42SE1-205ENST00000491825 C18orf32Q8TCD1 76 aa9.95□□□□□ -0.82
CDC42SE1-205ENST00000491825 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
CDC42SE1-205ENST00000491825 TRAV8-4A0A0B4J246 113 aa9.94□□□□□ -0.82
CDC42SE1-205ENST00000491825 PSCAO43653 123 aa9.94□□□□□ -0.82
CDC42SE1-205ENST00000491825 SCO1O75880 301 aa9.94□□□□□ -0.82
CDC42SE1-205ENST00000491825 G0S2P27469 103 aa9.94□□□□□ -0.82
CDC42SE1-205ENST00000491825 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-205ENST00000491825 CLPSL2Q6UWE3 100 aa9.94□□□□□ -0.82
CDC42SE1-205ENST00000491825 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
CDC42SE1-205ENST00000491825 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
CDC42SE1-205ENST00000491825 IGKV2D-24A0A075B6R9 120 aa9.93□□□□□ -0.82
CDC42SE1-205ENST00000491825 LRCOL1A6NCL2 159 aa9.93□□□□□ -0.82
CDC42SE1-205ENST00000491825 Q5VSD8 79 aa9.93□□□□□ -0.82
CDC42SE1-205ENST00000491825 DGAT2L7PQ6IED9 249 aa9.93□□□□□ -0.82
CDC42SE1-205ENST00000491825 ZNF664Q8N3J9 261 aa9.93□□□□□ -0.82
CDC42SE1-205ENST00000491825 CYSLTR1Q9Y271 337 aa9.93□□□□□ -0.82
CDC42SE1-205ENST00000491825 PYGO1Q9Y3Y4 419 aa9.93□□□□□ -0.82
CDC42SE1-205ENST00000491825 NPSP0C0P6 89 aa9.92□□□□□ -0.82
CDC42SE1-205ENST00000491825 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-205ENST00000491825 C2orf66Q6UXQ4 117 aa9.92□□□□□ -0.82
CDC42SE1-205ENST00000491825 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
CDC42SE1-205ENST00000491825 TRGC2P03986 189 aa9.91□□□□□ -0.82
CDC42SE1-205ENST00000491825 GCSHP23434 173 aa9.91□□□□□ -0.82
CDC42SE1-205ENST00000491825 KRTAP26-1Q6PEX3 210 aa9.91□□□□□ -0.82
CDC42SE1-205ENST00000491825 Q6ZUT4 128 aa9.91□□□□□ -0.82
CDC42SE1-205ENST00000491825 FA2HQ7L5A8 372 aa9.91□□□□□ -0.82
CDC42SE1-205ENST00000491825 AP5S1Q9NUS5 200 aa9.91□□□□□ -0.82
CDC42SE1-205ENST00000491825 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
CDC42SE1-205ENST00000491825 FAM104AQ969W3 186 aa9.9□□□□□ -0.82
CDC42SE1-205ENST00000491825 URB1-AS1Q96HZ7 61 aa9.9□□□□□ -0.82
CDC42SE1-205ENST00000491825 CCL25O15444 150 aa9.89□□□□□ -0.83
CDC42SE1-205ENST00000491825 LINC00614P0C842 121 aa9.89□□□□□ -0.83
CDC42SE1-205ENST00000491825 RAB5BP61020 215 aa9.89□□□□□ -0.83
CDC42SE1-205ENST00000491825 TOMM6Q96B49 74 aa9.89□□□□□ -0.83
CDC42SE1-205ENST00000491825 DMBT1Q9UGM3 2413 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE1-205ENST00000491825 IGLV10-54A0A075B6I4 117 aa9.88□□□□□ -0.83
CDC42SE1-205ENST00000491825 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
CDC42SE1-205ENST00000491825 IGIPA6NJ69 53 aa9.88□□□□□ -0.83
CDC42SE1-205ENST00000491825 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-205ENST00000491825 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
CDC42SE1-205ENST00000491825 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
CDC42SE1-205ENST00000491825 IGLV5-52A0A0A0MRZ9 124 aa9.87□□□□□ -0.83
CDC42SE1-205ENST00000491825 SMR3BP02814 79 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-205ENST00000491825 HAMPP81172 84 aa9.87□□□□□ -0.83
CDC42SE1-205ENST00000491825 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-205ENST00000491825 TMEM141Q96I45 108 aa9.87□□□□□ -0.83
CDC42SE1-205ENST00000491825 IGKV3OR2-268A0A0C4DH90 116 aa9.86□□□□□ -0.83
CDC42SE1-205ENST00000491825 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-205ENST00000491825 Q8N814 137 aa9.86□□□□□ -0.83
CDC42SE1-205ENST00000491825 CHCHD1Q96BP2 118 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-205ENST00000491825 SRRM2Q9UQ35 2752 aaKnown RBP9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 A0A096LNJ9 63 aa9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 WFDC2Q14508 124 aa9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 SS18Q15532 418 aa9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 PAPPA-AS1Q5QFB9 102 aa9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 Q6ZN92 141 aa9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 ERASQ7Z444 233 aa9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-205ENST00000491825 HBDP02042 147 aa9.84□□□□□ -0.83
CDC42SE1-205ENST00000491825 BAALCQ8WXS3 180 aa9.84□□□□□ -0.83
CDC42SE1-205ENST00000491825 AMELXQ99217 191 aa9.84□□□□□ -0.83
CDC42SE1-205ENST00000491825 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
CDC42SE1-205ENST00000491825 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms