RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 K7EQD1 137 aa8.53□□□□□ -1.04
SRGAP3-210ENST00000491467 Q6ZSN1 163 aa8.53□□□□□ -1.04
SRGAP3-210ENST00000491467 TRAV8-6A0A0B4J262 113 aa8.52□□□□□ -1.05
SRGAP3-210ENST00000491467 TRBV6-4A0A1B0GX49 114 aa8.52□□□□□ -1.05
SRGAP3-210ENST00000491467 MRPS36P82909 103 aaKnown RBP8.52□□□□□ -1.05
SRGAP3-210ENST00000491467 KIR2DL5BQ8NHK3 375 aa8.52□□□□□ -1.05
SRGAP3-210ENST00000491467 CHCHD7Q9BUK0 85 aa8.52□□□□□ -1.05
SRGAP3-210ENST00000491467 CHAC1Q9BUX1 264 aa8.52□□□□□ -1.05
SRGAP3-210ENST00000491467 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
SRGAP3-210ENST00000491467 NOP10Q9NPE3 64 aaKnown RBP8.52□□□□□ -1.05
SRGAP3-210ENST00000491467 HUWE1Q7Z6Z7 4374 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 PLAC8L1A1L4L8 177 aa8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 TAX1BP3O14907 124 aa8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 Q6ZTI0 123 aa8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 WFDC9Q8NEX5 89 aa8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 ZNRF2Q8NHG8 242 aa8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 PRADC1Q9BSG0 188 aa8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 GTSF1LQ9H1H1 148 aa8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 CSDC2Q9Y534 153 aaKnown RBP8.51□□□□□ -1.05
SRGAP3-210ENST00000491467 H7C423 109 aa8.5□□□□□ -1.05
SRGAP3-210ENST00000491467 LEPROTO15243 131 aa8.5□□□□□ -1.05
SRGAP3-210ENST00000491467 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
SRGAP3-210ENST00000491467 CEND1Q8N111 149 aa8.5□□□□□ -1.05
SRGAP3-210ENST00000491467 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
SRGAP3-210ENST00000491467 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
SRGAP3-210ENST00000491467 ZNF479Q96JC4 524 aa8.5□□□□□ -1.05
SRGAP3-210ENST00000491467 UBE2D4Q9Y2X8 147 aa8.5□□□□□ -1.05
SRGAP3-210ENST00000491467 TRGV2A0A075B6R0 118 aa8.49□□□□□ -1.05
SRGAP3-210ENST00000491467 SMIM13P0DJ93 91 aa8.49□□□□□ -1.05
SRGAP3-210ENST00000491467 APOC4P55056 127 aa8.49□□□□□ -1.05
SRGAP3-210ENST00000491467 TCTAP57738 103 aa8.49□□□□□ -1.05
SRGAP3-210ENST00000491467 UBE2D3P61077 147 aa8.49□□□□□ -1.05
SRGAP3-210ENST00000491467 UBE2D2P62837 147 aa8.49□□□□□ -1.05
SRGAP3-210ENST00000491467 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
SRGAP3-210ENST00000491467 WFDC10AQ9H1F0 79 aa8.49□□□□□ -1.05
SRGAP3-210ENST00000491467 TINCRA0A1B0GVN0 87 aa8.48□□□□□ -1.05
SRGAP3-210ENST00000491467 TMEM223A0PJW6 202 aa8.48□□□□□ -1.05
SRGAP3-210ENST00000491467 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
SRGAP3-210ENST00000491467 SLC25A29Q8N8R3 303 aa8.48□□□□□ -1.05
SRGAP3-210ENST00000491467 TRGV4A0A0C4DH28 118 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 GAGE12BA1L429 117 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 C9orf118A6NHY6 69 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 ZNF815PA8K554 130 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 GAGE7O76087 117 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 GAGE12FP0CL80 117 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 GAGE12GP0CL81 117 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 GAGE12IP0CL82 117 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 TIRAPP58753 221 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 UBE2V1Q13404 147 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 DGAT2L7PQ6IED9 249 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 FAM19A3Q7Z5A8 133 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 TTTY13Q9BZ97 58 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 SPANXB1Q9NS25 103 aaPredicted RBP8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 ALMS1Q8TCU4 4167 aa8.47□□□□□ -1.05
SRGAP3-210ENST00000491467 LYRM9A8MSI8 78 aa8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 J3QQQ9 107 aa8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 ZNF22P17026 224 aaPredicted RBP8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 LGALS3P17931 250 aaKnown RBP8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 GCSHP23434 173 aa8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 PTTG1IPP53801 180 aa8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 HIST1H4GQ99525 98 aa8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 OPRPNQ99935 248 aaPredicted RBP8.46□□□□□ -1.06
SRGAP3-210ENST00000491467 A0A0J9YXV3 536 aa8.45□□□□□ -1.06
SRGAP3-210ENST00000491467 TMEM238LA0A1B0GVL6 79 aa8.45□□□□□ -1.06
SRGAP3-210ENST00000491467 A6NJY4 79 aa8.45□□□□□ -1.06
SRGAP3-210ENST00000491467 VAMP3Q15836 100 aa8.45□□□□□ -1.06
SRGAP3-210ENST00000491467 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
SRGAP3-210ENST00000491467 Q9UF83 564 aa8.45□□□□□ -1.06
SRGAP3-210ENST00000491467 IGHV3-38A0A0C4DH36 116 aa8.44□□□□□ -1.06
SRGAP3-210ENST00000491467 FHL2Q14192 279 aa8.44□□□□□ -1.06
SRGAP3-210ENST00000491467 SBSPONQ8IVN8 264 aa8.44□□□□□ -1.06
SRGAP3-210ENST00000491467 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-210ENST00000491467 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
SRGAP3-210ENST00000491467 UBE2D1P51668 147 aa8.43□□□□□ -1.06
SRGAP3-210ENST00000491467 EMP1P54849 157 aa8.43□□□□□ -1.06
SRGAP3-210ENST00000491467 GTF2H5Q6ZYL4 71 aa8.43□□□□□ -1.06
SRGAP3-210ENST00000491467 TMEM243Q9BU79 118 aa8.43□□□□□ -1.06
SRGAP3-210ENST00000491467 X6R8D5 127 aa8.43□□□□□ -1.06
SRGAP3-210ENST00000491467 IGLV5-45A0A087WSX0 123 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 A0A0J9YY99 117 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 GAGE12JA6NER3 117 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 UBE2L6O14933 153 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 FXYD2P54710 66 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 HERVK_113P63121 156 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 GAGE4Q13068 117 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 GAGE5Q13069 117 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 GAGE13Q4V321 117 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 TMEM101Q96IK0 257 aa8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 GEMIN7Q9H840 131 aaKnown RBP8.42□□□□□ -1.06
SRGAP3-210ENST00000491467 DNAH10Q8IVF4 4471 aa8.41□□□□□ -1.06
SRGAP3-210ENST00000491467 IGHV1-58A0A0C4DH39 117 aa8.41□□□□□ -1.06
SRGAP3-210ENST00000491467 LINC00694P0DN24 101 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms