RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 hDV102S1A0JD36 115 aa7.38□□□□□ -1.23
HDAC9-225ENST00000490851 LYRM7Q5U5X0 104 aa7.38□□□□□ -1.23
HDAC9-225ENST00000490851 U3KQK5 164 aa7.38□□□□□ -1.23
HDAC9-225ENST00000490851 FBN1P35555 2871 aaKnown RBP7.38□□□□□ -1.23
HDAC9-225ENST00000490851 IGHV4-4A0A075B6R2 117 aa7.38□□□□□ -1.23
HDAC9-225ENST00000490851 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
HDAC9-225ENST00000490851 RPL13AP40429 203 aaKnown RBP7.38□□□□□ -1.23
HDAC9-225ENST00000490851 ANKRD29Q8N6D5 301 aa7.38□□□□□ -1.23
HDAC9-225ENST00000490851 A0A087WWL8 130 aa7.37□□□□□ -1.23
HDAC9-225ENST00000490851 IGLL5B9A064 214 aa7.37□□□□□ -1.23
HDAC9-225ENST00000490851 MED14OSP0DP75 135 aa7.37□□□□□ -1.23
HDAC9-225ENST00000490851 FAM74A4Q5TZK3 123 aa7.37□□□□□ -1.23
HDAC9-225ENST00000490851 C18orf15Q96N68 181 aa7.37□□□□□ -1.23
HDAC9-225ENST00000490851 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
HDAC9-225ENST00000490851 TRBV7-7A0A0K0K1E9 115 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 A8MTW9 85 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 INSP01308 110 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 LINC00173Q6ZV60 143 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 CHCHD1Q96BP2 118 aaKnown RBP7.36□□□□□ -1.23
HDAC9-225ENST00000490851 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 IMUPQ9GZP8 106 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 COL6A5A8TX70 2615 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 NBEAL2Q6ZNJ1 2754 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
HDAC9-225ENST00000490851 TRGV11A0A075B6L2 103 aa7.35□□□□□ -1.23
HDAC9-225ENST00000490851 VPREB1P12018 145 aa7.35□□□□□ -1.23
HDAC9-225ENST00000490851 KLK5Q9Y337 293 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-225ENST00000490851 F5H697 171 aa7.35□□□□□ -1.23
HDAC9-225ENST00000490851 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
HDAC9-225ENST00000490851 BEAN1Q3B7T3 259 aa7.35□□□□□ -1.23
HDAC9-225ENST00000490851 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
HDAC9-225ENST00000490851 SBSPONQ8IVN8 264 aa7.35□□□□□ -1.23
HDAC9-225ENST00000490851 RPL39LQ96EH5 51 aaKnown RBP7.35□□□□□ -1.23
HDAC9-225ENST00000490851 CHCHD5Q9BSY4 110 aa7.35□□□□□ -1.23
HDAC9-225ENST00000490851 H7C1H1 209 aa7.34□□□□□ -1.23
HDAC9-225ENST00000490851 TRACP01848 142 aa7.34□□□□□ -1.23
HDAC9-225ENST00000490851 P0DMU3 169 aa7.34□□□□□ -1.23
HDAC9-225ENST00000490851 FAM231AP0DMU4 169 aa7.34□□□□□ -1.23
HDAC9-225ENST00000490851 FAM231CP0DMU5 169 aa7.34□□□□□ -1.23
HDAC9-225ENST00000490851 KRTAP24-1Q3LI83 254 aa7.34□□□□□ -1.23
HDAC9-225ENST00000490851 PKD1L1Q8TDX9 2849 aa7.34□□□□□ -1.23
HDAC9-225ENST00000490851 NXPH4O95158 308 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 ZC2HC1BQ5TFG8 222 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 NRACQ8N912 160 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 DEFB104AQ8WTQ1 72 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 C19orf73Q9NVV2 129 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 HIGD1BQ9P298 99 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 EPM2AB3EWF7 344 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 COX7CP15954 63 aa7.33□□□□□ -1.24
HDAC9-225ENST00000490851 ZNF56Q15929 161 aa7.32□□□□□ -1.24
HDAC9-225ENST00000490851 CEND1Q8N111 149 aa7.32□□□□□ -1.24
HDAC9-225ENST00000490851 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
HDAC9-225ENST00000490851 C9orf66Q5T8R8 295 aa7.32□□□□□ -1.24
HDAC9-225ENST00000490851 Q9UF83 564 aa7.32□□□□□ -1.24
HDAC9-225ENST00000490851 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-225ENST00000490851 SUMO4Q6EEV6 95 aa7.31□□□□□ -1.24
HDAC9-225ENST00000490851 GTSCR1Q86UQ5 136 aa7.31□□□□□ -1.24
HDAC9-225ENST00000490851 KIF25-AS1Q9Y6Z4 181 aa7.31□□□□□ -1.24
HDAC9-225ENST00000490851 A0A096LNJ9 63 aa7.31□□□□□ -1.24
HDAC9-225ENST00000490851 LINC00315P59091 139 aa7.31□□□□□ -1.24
HDAC9-225ENST00000490851 USP17L23D6RBM5 183 aa7.3□□□□□ -1.24
HDAC9-225ENST00000490851 H3BS24 57 aa7.3□□□□□ -1.24
HDAC9-225ENST00000490851 GIG44P09565 113 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-225ENST00000490851 LINC01545Q5VT33 79 aa7.3□□□□□ -1.24
HDAC9-225ENST00000490851 NXT2Q9NPJ8 142 aaKnown RBP7.3□□□□□ -1.24
HDAC9-225ENST00000490851 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
HDAC9-225ENST00000490851 POM121L12Q8N7R1 296 aa7.3□□□□□ -1.24
HDAC9-225ENST00000490851 Q8N8P6 123 aa7.3□□□□□ -1.24
HDAC9-225ENST00000490851 C15orf53Q8NAA6 179 aa7.3□□□□□ -1.24
HDAC9-225ENST00000490851 HBDP02042 147 aa7.29□□□□□ -1.24
HDAC9-225ENST00000490851 SUMO2P61956 95 aaKnown RBP7.29□□□□□ -1.24
HDAC9-225ENST00000490851 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
HDAC9-225ENST00000490851 TMEM158Q8WZ71 300 aa7.29□□□□□ -1.24
HDAC9-225ENST00000490851 SMIM2Q9BVW6 85 aa7.29□□□□□ -1.24
HDAC9-225ENST00000490851 IGLV2-18A0A075B6J9 118 aa7.28□□□□□ -1.24
HDAC9-225ENST00000490851 MRPL55Q7Z7F7 128 aaKnown RBP7.28□□□□□ -1.24
HDAC9-225ENST00000490851 ZNF747Q9BV97 191 aa7.28□□□□□ -1.24
HDAC9-225ENST00000490851 TRGV1A0A0A0MS02 117 aa7.27□□□□□ -1.25
HDAC9-225ENST00000490851 A8MWV9 139 aa7.27□□□□□ -1.25
HDAC9-225ENST00000490851 NDUFC2-KCTD14E9PQ53 114 aa7.27□□□□□ -1.25
HDAC9-225ENST00000490851 LAGE3Q14657 143 aa7.27□□□□□ -1.25
HDAC9-225ENST00000490851 NOTCH1P46531 2555 aa7.27□□□□□ -1.25
HDAC9-225ENST00000490851 NACAE9PAV3 2078 aa7.27□□□□□ -1.25
HDAC9-225ENST00000490851 A0A0U1RQV1 116 aa7.26□□□□□ -1.25
HDAC9-225ENST00000490851 FCER1GP30273 86 aa7.26□□□□□ -1.25
HDAC9-225ENST00000490851 FXYD2P54710 66 aa7.26□□□□□ -1.25
HDAC9-225ENST00000490851 Q6ZRU5 148 aa7.26□□□□□ -1.25
HDAC9-225ENST00000490851 LINC00467Q9BRT7 94 aa7.26□□□□□ -1.25
HDAC9-225ENST00000490851 NOP10Q9NPE3 64 aaKnown RBP7.26□□□□□ -1.25
HDAC9-225ENST00000490851 M0QY20 66 aa7.26□□□□□ -1.25
HDAC9-225ENST00000490851 IGHV3-53P01767 116 aa7.26□□□□□ -1.25
HDAC9-225ENST00000490851 C12orf74Q32Q52 190 aa7.26□□□□□ -1.25
HDAC9-225ENST00000490851 SDHAF1A6NFY7 115 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 SCGB1C2P0DMR2 95 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 SERTAD4-AS1Q5TG53 156 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 Q6ZSN1 163 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 Q6ZTI0 123 aa7.25□□□□□ -1.25
HDAC9-225ENST00000490851 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms