RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
RIPPLY3-203ENST00000490393 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
RIPPLY3-203ENST00000490393 SEC11AP67812 179 aa9.57□□□□□ -0.88
RIPPLY3-203ENST00000490393 TMEM170BQ5T4T1 132 aa9.57□□□□□ -0.88
RIPPLY3-203ENST00000490393 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
RIPPLY3-203ENST00000490393 TINCRA0A1B0GVN0 87 aa9.57□□□□□ -0.88
RIPPLY3-203ENST00000490393 DGAT2L7PQ6IED9 249 aa9.57□□□□□ -0.88
RIPPLY3-203ENST00000490393 TAL2Q16559 108 aa9.56□□□□□ -0.88
RIPPLY3-203ENST00000490393 Q6ZUT4 128 aa9.56□□□□□ -0.88
RIPPLY3-203ENST00000490393 FAM19A3Q7Z5A8 133 aa9.56□□□□□ -0.88
RIPPLY3-203ENST00000490393 TMEM243Q9BU79 118 aa9.56□□□□□ -0.88
RIPPLY3-203ENST00000490393 TIRAPP58753 221 aa9.55□□□□□ -0.88
RIPPLY3-203ENST00000490393 ORAOV1Q8WV07 137 aa9.55□□□□□ -0.88
RIPPLY3-203ENST00000490393 LEPROTO15243 131 aa9.55□□□□□ -0.88
RIPPLY3-203ENST00000490393 UBE2D1P51668 147 aa9.55□□□□□ -0.88
RIPPLY3-203ENST00000490393 DNAH3Q8TD57 4116 aa9.54□□□□□ -0.88
RIPPLY3-203ENST00000490393 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
RIPPLY3-203ENST00000490393 SPART-AS1P0CW21 52 aa9.54□□□□□ -0.88
RIPPLY3-203ENST00000490393 CDC42SE2Q9NRR3 84 aa9.54□□□□□ -0.88
RIPPLY3-203ENST00000490393 TM2D2Q9BX73 214 aa9.53□□□□□ -0.88
RIPPLY3-203ENST00000490393 IGLV5-45A0A087WSX0 123 aa9.53□□□□□ -0.88
RIPPLY3-203ENST00000490393 ZNF815PA8K554 130 aa9.53□□□□□ -0.88
RIPPLY3-203ENST00000490393 ZNF25P17030 456 aaPredicted RBP9.53□□□□□ -0.88
RIPPLY3-203ENST00000490393 DAD1P61803 113 aa9.53□□□□□ -0.88
RIPPLY3-203ENST00000490393 RNASE13Q5GAN3 156 aaKnown RBP9.53□□□□□ -0.88
RIPPLY3-203ENST00000490393 PLEKHB2Q96CS7 222 aa9.53□□□□□ -0.88
RIPPLY3-203ENST00000490393 TEX48A0A1B0GUV7 120 aa9.52□□□□□ -0.89
RIPPLY3-203ENST00000490393 J3QQQ9 107 aa9.52□□□□□ -0.89
RIPPLY3-203ENST00000490393 UBE2L6O14933 153 aa9.52□□□□□ -0.89
RIPPLY3-203ENST00000490393 DEFB4AO15263 64 aa9.52□□□□□ -0.89
RIPPLY3-203ENST00000490393 GYPEP15421 78 aa9.52□□□□□ -0.89
RIPPLY3-203ENST00000490393 OR5A1Q8NGJ0 315 aa9.52□□□□□ -0.89
RIPPLY3-203ENST00000490393 ATP6V0E2Q8NHE4 81 aa9.52□□□□□ -0.89
RIPPLY3-203ENST00000490393 NBEAL2Q6ZNJ1 2754 aa9.52□□□□□ -0.89
RIPPLY3-203ENST00000490393 A6NDN8 102 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 PAX4O43316 350 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 ATP5G1P05496 136 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 TMEM101Q96IK0 257 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 COX11Q9Y6N1 276 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 TAX1BP3O14907 124 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 AMMECR1LQ6DCA0 310 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 CEND1Q8N111 149 aa9.51□□□□□ -0.89
RIPPLY3-203ENST00000490393 IGHV1-58A0A0C4DH39 117 aa9.5□□□□□ -0.89
RIPPLY3-203ENST00000490393 LGALS3P17931 250 aaKnown RBP9.5□□□□□ -0.89
RIPPLY3-203ENST00000490393 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
RIPPLY3-203ENST00000490393 CELA1Q9UNI1 258 aa9.5□□□□□ -0.89
RIPPLY3-203ENST00000490393 STAB1Q9NY15 2570 aa9.49□□□□□ -0.89
RIPPLY3-203ENST00000490393 G3V4G9 280 aa9.49□□□□□ -0.89
RIPPLY3-203ENST00000490393 HERVK_113P63121 156 aa9.49□□□□□ -0.89
RIPPLY3-203ENST00000490393 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
RIPPLY3-203ENST00000490393 VSIG2Q96IQ7 327 aa9.49□□□□□ -0.89
RIPPLY3-203ENST00000490393 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
RIPPLY3-203ENST00000490393 A0A0J9YY99 117 aa9.49□□□□□ -0.89
RIPPLY3-203ENST00000490393 H3BRM9 83 aa9.49□□□□□ -0.89
RIPPLY3-203ENST00000490393 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
RIPPLY3-203ENST00000490393 IGHV3-30-3P0DP02 117 aa9.48□□□□□ -0.89
RIPPLY3-203ENST00000490393 GCSHP23434 173 aa9.48□□□□□ -0.89
RIPPLY3-203ENST00000490393 SCGB1D4Q6XE38 83 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 LINC00469Q8N7U9 141 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 HIST1H4GQ99525 98 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 ANK2Q01484 3957 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 FXYD2P54710 66 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 COX6A2Q02221 97 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 CHCHD5Q9BSY4 110 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 CDKN2A-AS1Q9UH64 79 aa9.47□□□□□ -0.89
RIPPLY3-203ENST00000490393 GAGE6Q13070 117 aa9.46□□□□□ -0.9
RIPPLY3-203ENST00000490393 SH2D6Q7Z4S9 175 aa9.46□□□□□ -0.9
RIPPLY3-203ENST00000490393 C11orf68Q9H3H3 251 aaKnown RBP9.45□□□□□ -0.9
RIPPLY3-203ENST00000490393 TRAV8-3A0A0A6YYJ7 113 aa9.45□□□□□ -0.9
RIPPLY3-203ENST00000490393 TRAV13-1A0A0B4J241 112 aa9.45□□□□□ -0.9
RIPPLY3-203ENST00000490393 F5H768 121 aa9.45□□□□□ -0.9
RIPPLY3-203ENST00000490393 SMIM13P0DJ93 91 aa9.45□□□□□ -0.9
RIPPLY3-203ENST00000490393 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
RIPPLY3-203ENST00000490393 Q6ZVH6 145 aa9.45□□□□□ -0.9
RIPPLY3-203ENST00000490393 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
RIPPLY3-203ENST00000490393 IGLV5-39A0A0G2JS06 123 aa9.44□□□□□ -0.9
RIPPLY3-203ENST00000490393 MRPL23Q16540 153 aaKnown RBP9.44□□□□□ -0.9
RIPPLY3-203ENST00000490393 C12orf74Q32Q52 190 aa9.44□□□□□ -0.9
RIPPLY3-203ENST00000490393 PKD1L1Q8TDX9 2849 aa9.44□□□□□ -0.9
RIPPLY3-203ENST00000490393 IGHV3-64A0A075B6Q5 118 aa9.43□□□□□ -0.9
RIPPLY3-203ENST00000490393 A0A1B0GWB2 263 aa9.43□□□□□ -0.9
RIPPLY3-203ENST00000490393 C9orf118A6NHY6 69 aa9.43□□□□□ -0.9
RIPPLY3-203ENST00000490393 SPINK8P0C7L1 97 aa9.43□□□□□ -0.9
RIPPLY3-203ENST00000490393 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
RIPPLY3-203ENST00000490393 COL6A5A8TX70 2615 aa9.43□□□□□ -0.9
RIPPLY3-203ENST00000490393 H3BNG1 76 aa9.42□□□□□ -0.9
RIPPLY3-203ENST00000490393 K7EP13 123 aa9.42□□□□□ -0.9
RIPPLY3-203ENST00000490393 ZFAND6Q6FIF0 208 aa9.42□□□□□ -0.9
RIPPLY3-203ENST00000490393 MAST4O15021 2626 aa9.42□□□□□ -0.9
RIPPLY3-203ENST00000490393 C10orf126Q8N4M7 172 aa9.42□□□□□ -0.9
RIPPLY3-203ENST00000490393 RETNQ9HD89 108 aa9.42□□□□□ -0.9
RIPPLY3-203ENST00000490393 A0A0J9YXY3 114 aa9.41□□□□□ -0.9
RIPPLY3-203ENST00000490393 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
RIPPLY3-203ENST00000490393 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
RIPPLY3-203ENST00000490393 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.9
RIPPLY3-203ENST00000490393 IGHV3-30P01768 117 aa9.4□□□□□ -0.9
RIPPLY3-203ENST00000490393 IGHV3-30-5P0DP03 117 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms