RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 RHOHQ15669 191 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 TTC32Q5I0X7 151 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 TMEM170BQ5T4T1 132 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 PRR9Q5T870 116 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 C10orf99Q6UWK7 81 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 Q6ZQT7 251 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 C9orf139Q6ZV77 190 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 Q75L30 129 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 VMO1Q7Z5L0 202 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 SMIM20Q8N5G0 67 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 ZFAND2AQ8N6M9 145 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 PRR26Q8N8Z3 221 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 C15orf53Q8NAA6 179 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 DNAJC30Q96LL9 226 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 LITAFQ99732 161 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 SPANXCQ9NY87 97 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 LINC00527Q9UJ94 153 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 NOTCH3Q9UM47 2321 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 PDZD2O15018 2839 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 FLNCQ14315 2725 aa2.53□□□□□ -2
CRNKL1-203ENST00000490258 TRAV2A0A0B4J234 112 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 TRAV21A0A0B4J279 112 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 TRBV27A0A0K0K1C4 114 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 INAFM1C9JVW0 142 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 H3BMM0 161 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 H3BVH4 76 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 M0R1W7 72 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 LST1O00453 97 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 SOCS3O14543 225 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 CNIH1O95406 144 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV3-23P01764 117 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 ACYP1P07311 99 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV4-31P0DP07 118 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 LGALS3P17931 250 aaKnown RBP2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 CRIP2P52943 208 aaPredicted RBP2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 LMO4P61968 165 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 ZNF415Q09FC8 603 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 NSUN5P1Q3KNT7 163 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 SPANXN1Q5VSR9 72 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 C18orf65Q6ZTR6 163 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 KLHL30-AS1Q8NEE0 82 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 ZNRF2Q8NHG8 242 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 C10orf105Q8TEF2 133 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 UBE2WQ96B02 151 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 RPL39LQ96EH5 51 aaKnown RBP2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 EDA2RQ9HAV5 297 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 DPM3Q9P2X0 92 aa2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 CSDC2Q9Y534 153 aaKnown RBP2.52□□□□□ -2.01
CRNKL1-203ENST00000490258 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.51□□□□□ -2.019e-7■□□□□ 10.5
CRNKL1-203ENST00000490258 IGHV3OR16-8A0A075B7F1 116 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 IGHV7-81A0A0B4J1V7 117 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 A0A0J9YXY3 114 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 TEX49A0A1B0GTD5 131 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 H7C423 109 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 OVOL1O14753 267 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 RS1O15537 224 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 TIMM17BO60830 172 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 RNASE3P12724 160 aaKnown RBP2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 ZNF22P17026 224 aaPredicted RBP2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 RNASE4P34096 147 aaKnown RBP2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 CXCL5P42830 114 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 HIST1H4AP62805 103 aaKnown RBP2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 RPS28P62857 69 aaKnown RBP2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 DEFB113Q30KQ7 82 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 MINOS1Q5TGZ0 78 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 Q6ZSV7 163 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 TRPT1Q86TN4 253 aaKnown RBP2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 RNF182Q8N6D2 247 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 C14orf178Q8N769 122 aaPredicted RBP2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 DAND5Q8N907 189 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 LINC00526Q96FQ7 95 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 TMEM101Q96IK0 257 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 LINC00477Q96M19 166 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 METTL26Q96S19 204 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 PPDPFQ9H3Y8 114 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 TP53TG1Q9Y2A0 90 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 ICOSQ9Y6W8 199 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 MINOS1-NBL1R4GNA1 71 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 SETD2Q9BYW2 2564 aaPredicted RBP2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 ABCA1O95477 2261 aa2.51□□□□□ -2.01
CRNKL1-203ENST00000490258 A0A087WYN8 130 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 TRBV7-1A0A0A6YYK4 115 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 KLLNB2CW77 178 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 UQCRQO14949 82 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 SAA4P35542 130 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 SEC61BP60468 96 aaKnown RBP2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 MIAQ16674 131 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 C15orf32Q32M92 178 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 MEIG1Q5JSS6 88 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 FAM222AQ5U5X8 452 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 C2orf82Q6UX34 121 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 C5orf38Q86SI9 138 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 LINC00643Q86TS7 51 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 MUSTN1Q8IVN3 82 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 TMEM61Q8N0U2 210 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 C3orf22Q8N5N4 141 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 Q8N9W7 124 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 DCANP1Q8TF63 244 aa2.5□□□□□ -2.01
CRNKL1-203ENST00000490258 C9orf85Q96MD7 179 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms