RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 CYSLTR1Q9Y271 337 aa8.38□□□□□ -1.07
HDAC1-210ENST00000490081 COX11Q9Y6N1 276 aa8.38□□□□□ -1.07
HDAC1-210ENST00000490081 TRAV8-4A0A0B4J246 113 aa8.37□□□□□ -1.07
HDAC1-210ENST00000490081 CCL25O15444 150 aa8.37□□□□□ -1.07
HDAC1-210ENST00000490081 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
HDAC1-210ENST00000490081 C2orf66Q6UXQ4 117 aa8.37□□□□□ -1.07
HDAC1-210ENST00000490081 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
HDAC1-210ENST00000490081 ZNF664Q8N3J9 261 aa8.37□□□□□ -1.07
HDAC1-210ENST00000490081 OR5A1Q8NGJ0 315 aa8.37□□□□□ -1.07
HDAC1-210ENST00000490081 DNAH2Q9P225 4427 aa8.37□□□□□ -1.07
HDAC1-210ENST00000490081 FRAS1Q86XX4 4008 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 IGIPA6NJ69 53 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 RPL39P62891 51 aaKnown RBP8.36□□□□□ -1.07
HDAC1-210ENST00000490081 REG3AQ06141 175 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 LINC00269Q8N2A0 174 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 FAM104AQ969W3 186 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 RMI2Q96E14 147 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 TIMM17AQ99595 171 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 TM2D2Q9BX73 214 aa8.36□□□□□ -1.07
HDAC1-210ENST00000490081 DNAH17Q9UFH2 4485 aa8.35□□□□□ -1.07
HDAC1-210ENST00000490081 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
HDAC1-210ENST00000490081 ERASQ7Z444 233 aa8.35□□□□□ -1.07
HDAC1-210ENST00000490081 A0A096LNJ9 63 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BKO60814 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 CRPP02741 224 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BJP06899 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BOP23527 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BBP33778 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BDP58876 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BCP62807 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST2H2BEQ16778 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 PAPPA-AS1Q5QFB9 102 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.34□□□□□ -1.07
HDAC1-210ENST00000490081 BAGE3Q86Y29 109 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BHQ93079 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 UBE2WQ96B02 151 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BNQ99877 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 HIST1H2BMQ99879 126 aa8.34□□□□□ -1.07
HDAC1-210ENST00000490081 DNAH10Q8IVF4 4471 aa8.33□□□□□ -1.08
HDAC1-210ENST00000490081 RTL8CO15255 209 aa8.33□□□□□ -1.08
HDAC1-210ENST00000490081 COA6Q5JTJ3 125 aaKnown RBP8.33□□□□□ -1.08
HDAC1-210ENST00000490081 C1orf196B1AJZ1 125 aa8.32□□□□□ -1.08
HDAC1-210ENST00000490081 HBDP02042 147 aa8.32□□□□□ -1.08
HDAC1-210ENST00000490081 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
HDAC1-210ENST00000490081 KRTAP26-1Q6PEX3 210 aa8.32□□□□□ -1.08
HDAC1-210ENST00000490081 AMELXQ99217 191 aa8.32□□□□□ -1.08
HDAC1-210ENST00000490081 C1orf43Q9BWL3 253 aa8.32□□□□□ -1.08
HDAC1-210ENST00000490081 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
HDAC1-210ENST00000490081 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
HDAC1-210ENST00000490081 LINC00310P59036 64 aa8.31□□□□□ -1.08
HDAC1-210ENST00000490081 SCGB3A1Q96QR1 104 aa8.31□□□□□ -1.08
HDAC1-210ENST00000490081 HSBP1O75506 76 aa8.3□□□□□ -1.08
HDAC1-210ENST00000490081 Q6ZUT4 128 aa8.3□□□□□ -1.08
HDAC1-210ENST00000490081 FAM19A3Q7Z5A8 133 aa8.3□□□□□ -1.08
HDAC1-210ENST00000490081 VCX2Q9H322 139 aa8.3□□□□□ -1.08
HDAC1-210ENST00000490081 Q9HAA7 133 aa8.3□□□□□ -1.08
HDAC1-210ENST00000490081 IGKV2D-24A0A075B6R9 120 aa8.29□□□□□ -1.08
HDAC1-210ENST00000490081 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
HDAC1-210ENST00000490081 SERF1AO75920 110 aa8.29□□□□□ -1.08
HDAC1-210ENST00000490081 ATP5LO75964 103 aa8.29□□□□□ -1.08
HDAC1-210ENST00000490081 SS18Q15532 418 aa8.29□□□□□ -1.08
HDAC1-210ENST00000490081 Q6ZN92 141 aa8.29□□□□□ -1.08
HDAC1-210ENST00000490081 TEX43Q6ZNM6 134 aa8.29□□□□□ -1.08
HDAC1-210ENST00000490081 CD164L2Q6UWJ8 174 aa8.28□□□□□ -1.08
HDAC1-210ENST00000490081 LINC00173Q6ZV60 143 aa8.28□□□□□ -1.08
HDAC1-210ENST00000490081 MAPKAPK5-AS1Q8N8E1 139 aa8.28□□□□□ -1.08
HDAC1-210ENST00000490081 PACRGQ96M98 296 aaPredicted RBP8.28□□□□□ -1.08
HDAC1-210ENST00000490081 OPRPNQ99935 248 aaPredicted RBP8.28□□□□□ -1.08
HDAC1-210ENST00000490081 KRTAP17-1Q9BYP8 105 aa8.28□□□□□ -1.08
HDAC1-210ENST00000490081 HERC2O95714 4834 aa8.27□□□□□ -1.09
HDAC1-210ENST00000490081 LRCOL1A6NCL2 159 aa8.27□□□□□ -1.09
HDAC1-210ENST00000490081 PSCAO43653 123 aa8.27□□□□□ -1.09
HDAC1-210ENST00000490081 NUPR1O60356 82 aa8.27□□□□□ -1.09
HDAC1-210ENST00000490081 CLPSL2Q6UWE3 100 aa8.27□□□□□ -1.09
HDAC1-210ENST00000490081 CHCHD10Q8WYQ3 142 aaPredicted RBP8.27□□□□□ -1.09
HDAC1-210ENST00000490081 FAT2Q9NYQ8 4349 aa8.26□□□□□ -1.09
HDAC1-210ENST00000490081 PRSS29PA6NIE9 313 aa8.26□□□□□ -1.09
HDAC1-210ENST00000490081 UBE2D1P51668 147 aa8.26□□□□□ -1.09
HDAC1-210ENST00000490081 SEC11AP67812 179 aa8.26□□□□□ -1.09
HDAC1-210ENST00000490081 PMVKQ15126 192 aa8.26□□□□□ -1.09
HDAC1-210ENST00000490081 PMCHL1Q16048 86 aa8.26□□□□□ -1.09
HDAC1-210ENST00000490081 C2orf88Q9BSF0 95 aa8.26□□□□□ -1.09
HDAC1-210ENST00000490081 CST9LQ9H4G1 147 aa8.26□□□□□ -1.09
HDAC1-210ENST00000490081 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
HDAC1-210ENST00000490081 IFITM10A6NMD0 228 aa8.25□□□□□ -1.09
HDAC1-210ENST00000490081 TNP2Q05952 138 aa8.25□□□□□ -1.09
HDAC1-210ENST00000490081 FOXI1Q12951 378 aa8.25□□□□□ -1.09
HDAC1-210ENST00000490081 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
HDAC1-210ENST00000490081 FAM19A2Q8N3H0 131 aa8.25□□□□□ -1.09
HDAC1-210ENST00000490081 BAALCQ8WXS3 180 aa8.25□□□□□ -1.09
HDAC1-210ENST00000490081 IGLV10-54A0A075B6I4 117 aa8.24□□□□□ -1.09
HDAC1-210ENST00000490081 A0A087WTM6 91 aa8.24□□□□□ -1.09
HDAC1-210ENST00000490081 TRAV13-1A0A0B4J241 112 aa8.24□□□□□ -1.09
HDAC1-210ENST00000490081 IGKV3OR2-268A0A0C4DH90 116 aa8.24□□□□□ -1.09
HDAC1-210ENST00000490081 LEPROTL1O95214 131 aa8.24□□□□□ -1.09
HDAC1-210ENST00000490081 LINC00242Q5T6M2 205 aa8.24□□□□□ -1.09
HDAC1-210ENST00000490081 LINC01561Q8N1V8 128 aa8.24□□□□□ -1.09
HDAC1-210ENST00000490081 HECTD4Q9Y4D8 3996 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms