RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 RPL39P62891 51 aaKnown RBP7.24□□□□□ -1.25
VPS13D-210ENST00000489961 FA2HQ7L5A8 372 aa7.24□□□□□ -1.25
VPS13D-210ENST00000489961 ZNF664Q8N3J9 261 aa7.24□□□□□ -1.25
VPS13D-210ENST00000489961 CDC42SE2Q9NRR3 84 aa7.24□□□□□ -1.25
VPS13D-210ENST00000489961 CYSLTR1Q9Y271 337 aa7.24□□□□□ -1.25
VPS13D-210ENST00000489961 IGLV10-54A0A075B6I4 117 aa7.23□□□□□ -1.25
VPS13D-210ENST00000489961 A0A1B0GVY2 172 aa7.23□□□□□ -1.25
VPS13D-210ENST00000489961 LRCOL1A6NCL2 159 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 COLCA2A8K830 154 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 SCO1O75880 301 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 S100A1P23297 94 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 C2orf66Q6UXQ4 117 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 Q6ZUT4 128 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 C18orf32Q8TCD1 76 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 PYGO1Q9Y3Y4 419 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 FRAS1Q86XX4 4008 aa7.22□□□□□ -1.25
VPS13D-210ENST00000489961 DNAH10Q8IVF4 4471 aa7.21□□□□□ -1.26
VPS13D-210ENST00000489961 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
VPS13D-210ENST00000489961 LINC01546A6NGU7 62 aa7.21□□□□□ -1.26
VPS13D-210ENST00000489961 RAB5BP61020 215 aa7.21□□□□□ -1.26
VPS13D-210ENST00000489961 MRPS36P82909 103 aaKnown RBP7.21□□□□□ -1.26
VPS13D-210ENST00000489961 SS18Q15532 418 aa7.21□□□□□ -1.26
VPS13D-210ENST00000489961 MAPKAPK5-AS1Q8N8E1 139 aa7.21□□□□□ -1.26
VPS13D-210ENST00000489961 BAALCQ8WXS3 180 aa7.21□□□□□ -1.26
VPS13D-210ENST00000489961 DNAH2Q9P225 4427 aa7.2□□□□□ -1.26
VPS13D-210ENST00000489961 LINC01549A6NIU2 74 aa7.2□□□□□ -1.26
VPS13D-210ENST00000489961 CCL25O15444 150 aa7.2□□□□□ -1.26
VPS13D-210ENST00000489961 ATP6V1G1O75348 118 aa7.2□□□□□ -1.26
VPS13D-210ENST00000489961 TRGC2P03986 189 aa7.2□□□□□ -1.26
VPS13D-210ENST00000489961 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
VPS13D-210ENST00000489961 KRTAP26-1Q6PEX3 210 aa7.2□□□□□ -1.26
VPS13D-210ENST00000489961 SPATA12Q7Z6I5 190 aa7.2□□□□□ -1.26
VPS13D-210ENST00000489961 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
VPS13D-210ENST00000489961 AP5S1Q9NUS5 200 aa7.2□□□□□ -1.26
VPS13D-210ENST00000489961 GAGE12HA6NDE8 117 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 C1orf196B1AJZ1 125 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 LECT2O14960 151 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 NPSP0C0P6 89 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 LINC00614P0C842 121 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 C14orf177Q52M58 125 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 Q6ZN92 141 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 Q8N814 137 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 TOMM6Q96B49 74 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 TMEM141Q96I45 108 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 OPRPNQ99935 248 aaPredicted RBP7.19□□□□□ -1.26
VPS13D-210ENST00000489961 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
VPS13D-210ENST00000489961 DNAH17Q9UFH2 4485 aa7.18□□□□□ -1.26
VPS13D-210ENST00000489961 IGLV4-3A0A075B6K6 122 aa7.18□□□□□ -1.26
VPS13D-210ENST00000489961 TRAV13-1A0A0B4J241 112 aa7.18□□□□□ -1.26
VPS13D-210ENST00000489961 IFITM10A6NMD0 228 aa7.18□□□□□ -1.26
VPS13D-210ENST00000489961 XCL1P47992 114 aa7.18□□□□□ -1.26
VPS13D-210ENST00000489961 WFDC2Q14508 124 aa7.18□□□□□ -1.26
VPS13D-210ENST00000489961 PAPPA-AS1Q5QFB9 102 aa7.18□□□□□ -1.26
VPS13D-210ENST00000489961 IGIPA6NJ69 53 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 USP17L23D6RBM5 183 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 CDPF1Q6NVV7 123 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 TEX43Q6ZNM6 134 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 ERASQ7Z444 233 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 NTN5Q8WTR8 489 aaPredicted RBP7.17□□□□□ -1.26
VPS13D-210ENST00000489961 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 URB1-AS1Q96HZ7 61 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 SCGB3A1Q96QR1 104 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 TIMM17AQ99595 171 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 C2orf88Q9BSF0 95 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 VCX2Q9H322 139 aa7.17□□□□□ -1.26
VPS13D-210ENST00000489961 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
VPS13D-210ENST00000489961 FOXI1Q12951 378 aa7.16□□□□□ -1.26
VPS13D-210ENST00000489961 CFAP161Q6P656 301 aa7.16□□□□□ -1.26
VPS13D-210ENST00000489961 CD164L2Q6UWJ8 174 aa7.16□□□□□ -1.26
VPS13D-210ENST00000489961 BAGE3Q86Y29 109 aa7.16□□□□□ -1.26
VPS13D-210ENST00000489961 CHCHD1Q96BP2 118 aaKnown RBP7.16□□□□□ -1.26
VPS13D-210ENST00000489961 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.15□□□□□ -1.26
VPS13D-210ENST00000489961 IGLV5-52A0A0A0MRZ9 124 aa7.15□□□□□ -1.26
VPS13D-210ENST00000489961 HBDP02042 147 aa7.15□□□□□ -1.26
VPS13D-210ENST00000489961 FAT2Q9NYQ8 4349 aa7.15□□□□□ -1.27
VPS13D-210ENST00000489961 AMELXQ99217 191 aa7.14□□□□□ -1.27
VPS13D-210ENST00000489961 A0A096LNJ9 63 aa7.13□□□□□ -1.27
VPS13D-210ENST00000489961 IGHV1-58A0A0C4DH39 117 aa7.13□□□□□ -1.27
VPS13D-210ENST00000489961 hDV102S1A0JD36 115 aa7.13□□□□□ -1.27
VPS13D-210ENST00000489961 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-210ENST00000489961 COX7A2LO14548 114 aa7.13□□□□□ -1.27
VPS13D-210ENST00000489961 HSBP1O75506 76 aa7.13□□□□□ -1.27
VPS13D-210ENST00000489961 MALP21145 153 aa7.13□□□□□ -1.27
VPS13D-210ENST00000489961 FUSP35637 526 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS13D-210ENST00000489961 PMCHL1Q16048 86 aa7.13□□□□□ -1.27
VPS13D-210ENST00000489961 LINC00173Q6ZV60 143 aa7.13□□□□□ -1.27
VPS13D-210ENST00000489961 ATP5LO75964 103 aa7.12□□□□□ -1.27
VPS13D-210ENST00000489961 PRSS1P07477 247 aa7.12□□□□□ -1.27
VPS13D-210ENST00000489961 UBE2D1P51668 147 aa7.12□□□□□ -1.27
VPS13D-210ENST00000489961 SEC11AP67812 179 aa7.12□□□□□ -1.27
VPS13D-210ENST00000489961 ZC2HC1BQ5TFG8 222 aa7.12□□□□□ -1.27
VPS13D-210ENST00000489961 C15orf56Q8N910 161 aa7.12□□□□□ -1.27
VPS13D-210ENST00000489961 APOMO95445 188 aa7.11□□□□□ -1.27
VPS13D-210ENST00000489961 GCSHP23434 173 aa7.11□□□□□ -1.27
VPS13D-210ENST00000489961 PDZD11Q5EBL8 140 aa7.11□□□□□ -1.27
VPS13D-210ENST00000489961 LINC00242Q5T6M2 205 aa7.11□□□□□ -1.27
VPS13D-210ENST00000489961 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
VPS13D-210ENST00000489961 PKD1P98161 4303 aa7.11□□□□□ -1.27
VPS13D-210ENST00000489961 HECTD4Q9Y4D8 3996 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms