RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 LY6G5BQ8NDX9 201 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 NPBQ8NG41 125 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 LINC00846Q9NV44 126 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 ZNF580Q9UK33 172 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 SDK1Q7Z5N4 2213 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 PLCE1Q9P212 2302 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 AHCTF1Q8WYP5 2266 aa3.49□□□□□ -1.85
SNRNP40-206ENST00000489853 TRBV10-3A0A0K0K1G6 114 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 H7BZZ5 65 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 GNRH2O43555 120 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 RNASE3P12724 160 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 LPAL2Q16609 132 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 C20orf197Q8N268 126 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 Q8N2B8 174 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 WFDC11Q8NEX6 87 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 LINC00308Q8TCZ7 52 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 WWC2-AS2Q96NR7 200 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 KAAG1Q9UBP8 84 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 CLPSL1A2RUU4 121 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 NDUFA1O15239 70 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 C6orf226Q5I0X4 101 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 LYPD2Q6UXB3 125 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 VMO1Q7Z5L0 202 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 C9orf106Q8NAJ2 232 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 ARHGAP32A7KAX9 2087 aa3.48□□□□□ -1.85
SNRNP40-206ENST00000489853 TRAV7A0A075B6U4 112 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 SOCS3O14543 225 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 TRBV12-3P01733 135 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 IGHV3-23P01764 117 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 IGF1P05019 195 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 RPL28P46779 137 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 KLKP1Q107X0 134 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 LYPD5Q6UWN5 251 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 APRG1Q8IVJ8 170 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 DEFB104AQ8WTQ1 72 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 ITLN2Q8WWU7 325 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 Q96MF0 132 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 CADP27708 2225 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 CACNA1EQ15878 2313 aa3.47□□□□□ -1.85
SNRNP40-206ENST00000489853 UNC79Q9P2D8 2635 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 A0A0U1RQV1 116 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 H0YGX0 51 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 M0QY20 66 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 NDUFC1O43677 76 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 CFHR3Q02985 330 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 CDSNQ15517 529 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 KLK9Q2XQG4 91 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 BBC3Q96PG8 261 aaPredicted RBP3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 C14orf132Q9NPU4 83 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 KLK9Q9UKQ9 250 aa3.46□□□□□ -1.85
SNRNP40-206ENST00000489853 ICE1Q9Y2F5 2266 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 NAV2Q8IVL1 2488 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 TRAV23DV6A0A075B6W5 121 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 IGHV3OR16-8A0A075B7F1 116 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 TRAV13-2A0A0B4J235 113 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 TRBV7-6A0A0J9YX20 115 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 PATE3B3GLJ2 98 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 CCKP06307 115 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 CD28P10747 220 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 FAM104AQ969W3 186 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 Q9HAA7 133 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 LAMTOR3Q9UHA4 124 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 MED13Q9UHV7 2174 aa3.46□□□□□ -1.86
SNRNP40-206ENST00000489853 IGHV3-35A0A0C4DH35 117 aa3.45□□□□□ -1.86
SNRNP40-206ENST00000489853 IGHV3-66A0A0C4DH42 116 aa3.45□□□□□ -1.86
SNRNP40-206ENST00000489853 HILS1P60008 231 aa3.45□□□□□ -1.86
SNRNP40-206ENST00000489853 RNASE6Q93091 150 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-206ENST00000489853 SIRPDQ9H106 197 aa3.45□□□□□ -1.86
SNRNP40-206ENST00000489853 DPM3Q9P2X0 92 aa3.45□□□□□ -1.86
SNRNP40-206ENST00000489853 URB1O60287 2271 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-206ENST00000489853 MUC4Q99102 2169 aa3.45□□□□□ -1.86
SNRNP40-206ENST00000489853 KRTAP23-1A1A580 65 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 COX7A1P24310 79 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 RBM3P98179 157 aaKnown RBP3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 C1orf158Q8N1D5 194 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 CCL17Q92583 94 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 HECTD1Q9ULT8 2610 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 IGHV3OR16-13A0A075B7E8 117 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 IGLV5-45A0A087WSX0 123 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 IGHV3-74A0A0B4J1X5 117 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 NDPQ00604 133 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 C15orf32Q32M92 178 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 C9orf129Q5T035 196 aaKnown RBP3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 SOSTDC1Q6X4U4 206 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 ZNF625Q96I27 306 aaPredicted RBP3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 KRTAP9-3Q9BYQ3 159 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 LINC00474Q9P2X8 69 aa3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 COL27A1Q8IZC6 1860 aaPredicted RBP3.44□□□□□ -1.86
SNRNP40-206ENST00000489853 WNK2Q9Y3S1 2297 aa3.43□□□□□ -1.86
SNRNP40-206ENST00000489853 MGAQ8IWI9 3026 aa3.43□□□□□ -1.86
SNRNP40-206ENST00000489853 IGLV5-39A0A0G2JS06 123 aa3.43□□□□□ -1.86
SNRNP40-206ENST00000489853 ENHOQ6UWT2 76 aa3.43□□□□□ -1.86
SNRNP40-206ENST00000489853 FAM19A1Q7Z5A9 133 aa3.43□□□□□ -1.86
SNRNP40-206ENST00000489853 IL17DQ8TAD2 202 aa3.43□□□□□ -1.86
SNRNP40-206ENST00000489853 Q9H8V8 135 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms