RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ZNF25P17030 456 aaPredicted RBP14.37□□□□□ -0.11
SND1-214ENST00000489417 ZC2HC1BQ5TFG8 222 aa14.37□□□□□ -0.11
SND1-214ENST00000489417 PMCHL2Q9BQD1 86 aa14.37□□□□□ -0.11
SND1-214ENST00000489417 VCX2Q9H322 139 aa14.37□□□□□ -0.11
SND1-214ENST00000489417 CST9LQ9H4G1 147 aa14.36□□□□□ -0.11
SND1-214ENST00000489417 TMEM262E9PQX1 116 aa14.35□□□□□ -0.11
SND1-214ENST00000489417 ESRGQ1W209 222 aa14.35□□□□□ -0.11
SND1-214ENST00000489417 AMELXQ99217 191 aa14.35□□□□□ -0.11
SND1-214ENST00000489417 STAB2Q8WWQ8 2551 aa14.35□□□□□ -0.11
SND1-214ENST00000489417 TRAV8-6A0A0B4J262 113 aa14.34□□□□□ -0.11
SND1-214ENST00000489417 PKIAP61925 76 aa14.34□□□□□ -0.11
SND1-214ENST00000489417 RNASE13Q5GAN3 156 aaKnown RBP14.34□□□□□ -0.11
SND1-214ENST00000489417 CDPF1Q6NVV7 123 aa14.34□□□□□ -0.11
SND1-214ENST00000489417 TEX43Q6ZNM6 134 aa14.34□□□□□ -0.11
SND1-214ENST00000489417 CHTOPQ9Y3Y2 248 aaKnown RBP14.34□□□□□ -0.11
SND1-214ENST00000489417 LINC00518Q8N0U6 118 aa14.33□□□□□ -0.11
SND1-214ENST00000489417 CDC42SE2Q9NRR3 84 aa14.33□□□□□ -0.11
SND1-214ENST00000489417 MRPL35Q9NZE8 188 aaKnown RBP14.33□□□□□ -0.11
SND1-214ENST00000489417 NUPR2A6NF83 97 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 F8VRH5 84 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 RBX1P62877 108 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 ZNF664Q8N3J9 261 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 C12orf57Q99622 126 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 IGLV4-60A0A075B6I1 120 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 A0A1B0GUV1 79 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 MPV17L2Q567V2 206 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 ATOH7Q8N100 152 aa14.32□□□□□ -0.12
SND1-214ENST00000489417 DPM2O94777 84 aa14.31□□□□□ -0.12
SND1-214ENST00000489417 C2orf88Q9BSF0 95 aa14.31□□□□□ -0.12
SND1-214ENST00000489417 KLK5Q9Y337 293 aaPredicted RBP14.3□□□□□ -0.12
SND1-214ENST00000489417 IGKCP01834 107 aa14.29□□□□□ -0.12
SND1-214ENST00000489417 IGLV4-69A0A075B6H9 119 aa14.28□□□□□ -0.12
SND1-214ENST00000489417 PLNP26678 52 aa14.28□□□□□ -0.12
SND1-214ENST00000489417 WFDC10BQ8IUB3 73 aa14.28□□□□□ -0.12
SND1-214ENST00000489417 APLNQ9ULZ1 77 aa14.28□□□□□ -0.12
SND1-214ENST00000489417 CCL18P55774 89 aa14.27□□□□□ -0.12
SND1-214ENST00000489417 Q8N3U1 123 aa14.26□□□□□ -0.13
SND1-214ENST00000489417 MRPS16Q9Y3D3 137 aaKnown RBP14.26□□□□□ -0.13
SND1-214ENST00000489417 LINC00588Q9Y4M8 146 aa14.26□□□□□ -0.13
SND1-214ENST00000489417 A0A0J9YXV3 536 aa14.25□□□□□ -0.13
SND1-214ENST00000489417 IGLC3P0DOY3 106 aa14.25□□□□□ -0.13
SND1-214ENST00000489417 UBE2D1P51668 147 aa14.25□□□□□ -0.13
SND1-214ENST00000489417 S100A12P80511 92 aa14.25□□□□□ -0.13
SND1-214ENST00000489417 VAMP8Q9BV40 100 aa14.25□□□□□ -0.13
SND1-214ENST00000489417 TRAV9-2A0A087WT02 112 aa14.24□□□□□ -0.13
SND1-214ENST00000489417 C11orf86A6NJI1 115 aa14.24□□□□□ -0.13
SND1-214ENST00000489417 NFE4Q86UQ8 179 aa14.24□□□□□ -0.13
SND1-214ENST00000489417 TRAV13-1A0A0B4J241 112 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 hDV102S1A0JD36 115 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 IGHV3-30P01768 117 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 IGHV3-33P01772 117 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 ANGP03950 147 aaKnown RBP14.23□□□□□ -0.13
SND1-214ENST00000489417 IGHV3-30-3P0DP02 117 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 IGHV3-30-5P0DP03 117 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 TCTAP57738 103 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 MAJINQ3KP22 176 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 CHAC1Q9BUX1 264 aa14.23□□□□□ -0.13
SND1-214ENST00000489417 IGKV3OR2-268A0A0C4DH90 116 aa14.22□□□□□ -0.13
SND1-214ENST00000489417 HSBP1L1C9JCN9 74 aa14.22□□□□□ -0.13
SND1-214ENST00000489417 PAM16Q9Y3D7 125 aa14.22□□□□□ -0.13
SND1-214ENST00000489417 DYNC2H1Q8NCM8 4307 aaKnown RBP14.21□□□□□ -0.13
SND1-214ENST00000489417 TINCRA0A1B0GVN0 87 aa14.21□□□□□ -0.13
SND1-214ENST00000489417 ZFAND6Q6FIF0 208 aa14.21□□□□□ -0.13
SND1-214ENST00000489417 FAM19A3Q7Z5A8 133 aa14.21□□□□□ -0.13
SND1-214ENST00000489417 LINC00269Q8N2A0 174 aa14.21□□□□□ -0.13
SND1-214ENST00000489417 LINC01556Q5JQF7 62 aa14.2□□□□□ -0.14
SND1-214ENST00000489417 SEC11AP67812 179 aa14.19□□□□□ -0.14
SND1-214ENST00000489417 SPATA45Q537H7 98 aa14.19□□□□□ -0.14
SND1-214ENST00000489417 LINC00242Q5T6M2 205 aa14.19□□□□□ -0.14
SND1-214ENST00000489417 CLPSL2Q6UWE3 100 aa14.19□□□□□ -0.14
SND1-214ENST00000489417 STPG4Q8N801 248 aa14.19□□□□□ -0.14
SND1-214ENST00000489417 MUC7Q8TAX7 377 aa14.19□□□□□ -0.14
SND1-214ENST00000489417 UPK3BQ9BT76 320 aa14.19□□□□□ -0.14
SND1-214ENST00000489417 LINC00959A0A1B0GUT2 108 aa14.18□□□□□ -0.14
SND1-214ENST00000489417 ZNF22P17026 224 aaPredicted RBP14.18□□□□□ -0.14
SND1-214ENST00000489417 WWC2-AS2Q96NR7 200 aa14.18□□□□□ -0.14
SND1-214ENST00000489417 GEMIN7Q9H840 131 aaKnown RBP14.18□□□□□ -0.14
SND1-214ENST00000489417 KLK12Q9UKR0 248 aa14.18□□□□□ -0.14
SND1-214ENST00000489417 SIVA1O15304 175 aa14.17□□□□□ -0.14
SND1-214ENST00000489417 DNAH10OSP0CZ25 163 aa14.17□□□□□ -0.14
SND1-214ENST00000489417 REG3AQ06141 175 aa14.17□□□□□ -0.14
SND1-214ENST00000489417 TMEM170BQ5T4T1 132 aa14.17□□□□□ -0.14
SND1-214ENST00000489417 HERVK_113P63121 156 aa14.16□□□□□ -0.14
SND1-214ENST00000489417 SS18Q15532 418 aa14.16□□□□□ -0.14
SND1-214ENST00000489417 ANKRD39Q53RE8 183 aa14.16□□□□□ -0.14
SND1-214ENST00000489417 UBE2DNLQ8IWF7 75 aa14.15□□□□□ -0.14
SND1-214ENST00000489417 PRR34Q9NV39 138 aa14.15□□□□□ -0.14
SND1-214ENST00000489417 DNAH7Q8WXX0 4024 aa14.15□□□□□ -0.14
SND1-214ENST00000489417 CCL25O15444 150 aa14.15□□□□□ -0.14
SND1-214ENST00000489417 COX6A2Q02221 97 aa14.15□□□□□ -0.14
SND1-214ENST00000489417 LINC00469Q8N7U9 141 aa14.15□□□□□ -0.14
SND1-214ENST00000489417 IGLV5-45A0A087WSX0 123 aa14.14□□□□□ -0.15
SND1-214ENST00000489417 HERVK_113P61574 105 aa14.14□□□□□ -0.15
SND1-214ENST00000489417 CRPP02741 224 aa14.13□□□□□ -0.15
SND1-214ENST00000489417 ENHOQ6UWT2 76 aa14.13□□□□□ -0.15
SND1-214ENST00000489417 CDKN2A-AS1Q9UH64 79 aa14.13□□□□□ -0.15
SND1-214ENST00000489417 TMEM223A0PJW6 202 aa14.12□□□□□ -0.15
SND1-214ENST00000489417 UBE2WQ96B02 151 aa14.12□□□□□ -0.15
SND1-214ENST00000489417 H3BRM9 83 aa14.11□□□□□ -0.15
SND1-214ENST00000489417 PRO1933Q9H354 126 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms