RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 APLNQ9ULZ1 77 aa7.34□□□□□ -1.23
USP11-209ENST00000488848 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
USP11-209ENST00000488848 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.33□□□□□ -1.24
USP11-209ENST00000488848 IGKV2-29A2NJV5 120 aaPredicted RBP7.33□□□□□ -1.24
USP11-209ENST00000488848 SMIM6P0DI80 62 aa7.33□□□□□ -1.24
USP11-209ENST00000488848 ODF1Q14990 250 aa7.33□□□□□ -1.24
USP11-209ENST00000488848 CDC42SE2Q9NRR3 84 aa7.33□□□□□ -1.24
USP11-209ENST00000488848 KLK5Q9Y337 293 aaPredicted RBP7.33□□□□□ -1.24
USP11-209ENST00000488848 RYR3Q15413 4870 aa7.32□□□□□ -1.24
USP11-209ENST00000488848 K7EP13 123 aa7.32□□□□□ -1.24
USP11-209ENST00000488848 PMVKQ15126 192 aa7.32□□□□□ -1.24
USP11-209ENST00000488848 ESRGQ1W209 222 aa7.32□□□□□ -1.24
USP11-209ENST00000488848 A0A087WX48 190 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 TRAV8-6A0A0B4J262 113 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 UBE2L6O14933 153 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 CCL25O15444 150 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 DNAH10OSP0CZ25 163 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 PYY3Q5JQD4 70 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 LINC01556Q5JQF7 62 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 Q6ZN92 141 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 ZNF664Q8N3J9 261 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 OR5A1Q8NGJ0 315 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 WWC2-AS2Q96NR7 200 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 CHCHD5Q9BSY4 110 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
USP11-209ENST00000488848 C20orf202A1L168 122 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 IGLL5B9A064 214 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 F8VRH5 84 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 RBX1P62877 108 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 Q6ZUT4 128 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 NFE4Q86UQ8 179 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 MUC7Q8TAX7 377 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 TMEM101Q96IK0 257 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 PRR34Q9NV39 138 aa7.3□□□□□ -1.24
USP11-209ENST00000488848 KMT2CQ8NEZ4 4911 aaKnown RBP7.3□□□□□ -1.24
USP11-209ENST00000488848 IGLV5-45A0A087WSX0 123 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 PRSS29PA6NIE9 313 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 IGLC3P0DOY3 106 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 PLNP26678 52 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 CCL18P55774 89 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 KRTDAPP60985 99 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 MPV17L2Q567V2 206 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 AMMECR1LQ6DCA0 310 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 TEX43Q6ZNM6 134 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 VCX2Q9H322 139 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
USP11-209ENST00000488848 IGLV4-69A0A075B6H9 119 aa7.28□□□□□ -1.24
USP11-209ENST00000488848 PRSS1P07477 247 aa7.28□□□□□ -1.24
USP11-209ENST00000488848 UBE2D1P51668 147 aa7.28□□□□□ -1.24
USP11-209ENST00000488848 GAGE6Q13070 117 aa7.28□□□□□ -1.24
USP11-209ENST00000488848 DGAT2L7PQ6IED9 249 aa7.28□□□□□ -1.24
USP11-209ENST00000488848 DEFB104AQ8WTQ1 72 aa7.28□□□□□ -1.24
USP11-209ENST00000488848 C2orf88Q9BSF0 95 aa7.28□□□□□ -1.24
USP11-209ENST00000488848 IGLV4-60A0A075B6I1 120 aa7.27□□□□□ -1.25
USP11-209ENST00000488848 TINCRA0A1B0GVN0 87 aa7.27□□□□□ -1.25
USP11-209ENST00000488848 SEC11AP67812 179 aa7.27□□□□□ -1.25
USP11-209ENST00000488848 OPRPNQ99935 248 aaPredicted RBP7.27□□□□□ -1.25
USP11-209ENST00000488848 MRPL35Q9NZE8 188 aaKnown RBP7.27□□□□□ -1.25
USP11-209ENST00000488848 C3orf84H3BNL1 204 aa7.26□□□□□ -1.25
USP11-209ENST00000488848 DPM2O94777 84 aa7.26□□□□□ -1.25
USP11-209ENST00000488848 WFDC10BQ8IUB3 73 aa7.26□□□□□ -1.25
USP11-209ENST00000488848 CHTOPQ9Y3Y2 248 aaKnown RBP7.26□□□□□ -1.25
USP11-209ENST00000488848 DNAH2Q9P225 4427 aa7.25□□□□□ -1.25
USP11-209ENST00000488848 IGKCP01834 107 aa7.25□□□□□ -1.25
USP11-209ENST00000488848 LINC01561Q8N1V8 128 aa7.25□□□□□ -1.25
USP11-209ENST00000488848 TRAV8-4A0A0B4J246 113 aa7.24□□□□□ -1.25
USP11-209ENST00000488848 C11orf86A6NJI1 115 aa7.24□□□□□ -1.25
USP11-209ENST00000488848 SIVA1O15304 175 aa7.24□□□□□ -1.25
USP11-209ENST00000488848 HERVK_113P63121 156 aa7.24□□□□□ -1.25
USP11-209ENST00000488848 LINC00242Q5T6M2 205 aa7.24□□□□□ -1.25
USP11-209ENST00000488848 C10orf126Q8N4M7 172 aa7.24□□□□□ -1.25
USP11-209ENST00000488848 KMT2AQ03164 3969 aa7.24□□□□□ -1.25
USP11-209ENST00000488848 BIRC6Q9NR09 4857 aa7.23□□□□□ -1.25
USP11-209ENST00000488848 IGHV3OR16-9A0A0B4J2B5 98 aa7.23□□□□□ -1.25
USP11-209ENST00000488848 TMEM262E9PQX1 116 aa7.23□□□□□ -1.25
USP11-209ENST00000488848 SCGB1D1O95968 90 aa7.23□□□□□ -1.25
USP11-209ENST00000488848 MIAQ16674 131 aa7.23□□□□□ -1.25
USP11-209ENST00000488848 LINC00518Q8N0U6 118 aa7.23□□□□□ -1.25
USP11-209ENST00000488848 SACSQ9NZJ4 4579 aa7.23□□□□□ -1.25
USP11-209ENST00000488848 TRAV9-2A0A087WT02 112 aa7.22□□□□□ -1.25
USP11-209ENST00000488848 LINC00959A0A1B0GUT2 108 aa7.22□□□□□ -1.25
USP11-209ENST00000488848 IBA57-AS1B1ANH7 110 aa7.22□□□□□ -1.25
USP11-209ENST00000488848 ZNF22P17026 224 aaPredicted RBP7.22□□□□□ -1.25
USP11-209ENST00000488848 REG3AQ06141 175 aa7.22□□□□□ -1.25
USP11-209ENST00000488848 ZC2HC1BQ5TFG8 222 aa7.22□□□□□ -1.25
USP11-209ENST00000488848 Q8N3U1 123 aa7.22□□□□□ -1.25
USP11-209ENST00000488848 CHAC1Q9BUX1 264 aa7.22□□□□□ -1.25
USP11-209ENST00000488848 DNAH10Q8IVF4 4471 aa7.21□□□□□ -1.26
USP11-209ENST00000488848 IGLV5-39A0A0G2JS06 123 aa7.21□□□□□ -1.26
USP11-209ENST00000488848 A0A0J9YXV3 536 aa7.21□□□□□ -1.26
USP11-209ENST00000488848 ANGP03950 147 aaKnown RBP7.21□□□□□ -1.26
USP11-209ENST00000488848 CASC10Q5T4H9 136 aa7.21□□□□□ -1.26
USP11-209ENST00000488848 ENHOQ6UWT2 76 aa7.21□□□□□ -1.26
USP11-209ENST00000488848 LINC00269Q8N2A0 174 aa7.21□□□□□ -1.26
USP11-209ENST00000488848 Q9H8V8 135 aa7.21□□□□□ -1.26
USP11-209ENST00000488848 A0A087WZ39 114 aa7.2□□□□□ -1.26
USP11-209ENST00000488848 H0Y8G0 127 aa7.2□□□□□ -1.26
USP11-209ENST00000488848 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
USP11-209ENST00000488848 KRTAP26-1Q6PEX3 210 aa7.2□□□□□ -1.26
USP11-209ENST00000488848 CD164L2Q6UWJ8 174 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms