RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 C20orf203Q8NBC4 194 aa6.53□□□□□ -1.36
PDPN-206ENST00000488631 C20orf78Q9BR46 151 aa6.53□□□□□ -1.36
PDPN-206ENST00000488631 FRAS1Q86XX4 4008 aa6.53□□□□□ -1.36
PDPN-206ENST00000488631 TRAV8-4A0A0B4J246 113 aa6.52□□□□□ -1.37
PDPN-206ENST00000488631 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
PDPN-206ENST00000488631 A0A1B0GXF2 115 aa6.52□□□□□ -1.37
PDPN-206ENST00000488631 TCAPO15273 167 aa6.52□□□□□ -1.37
PDPN-206ENST00000488631 APOC3P02656 99 aa6.52□□□□□ -1.37
PDPN-206ENST00000488631 ZNF25P17030 456 aaPredicted RBP6.52□□□□□ -1.37
PDPN-206ENST00000488631 POLR2KP53803 58 aaKnown RBP6.52□□□□□ -1.37
PDPN-206ENST00000488631 WFDC2Q14508 124 aa6.52□□□□□ -1.37
PDPN-206ENST00000488631 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
PDPN-206ENST00000488631 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
PDPN-206ENST00000488631 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
PDPN-206ENST00000488631 GAGE12HA6NDE8 117 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 USP17L23D6RBM5 183 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 NPYP01303 97 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 SS18Q15532 418 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 MAPKAPK5-AS1Q8N8E1 139 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 IMMP2LQ96T52 175 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 MAP1LC3AQ9H492 121 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 PRR34Q9NV39 138 aa6.51□□□□□ -1.37
PDPN-206ENST00000488631 DNAH17Q9UFH2 4485 aa6.5□□□□□ -1.37
PDPN-206ENST00000488631 hDV102S1A0JD36 115 aa6.5□□□□□ -1.37
PDPN-206ENST00000488631 XCL1P47992 114 aa6.5□□□□□ -1.37
PDPN-206ENST00000488631 CLRN3Q8NCR9 226 aa6.5□□□□□ -1.37
PDPN-206ENST00000488631 SMIM2Q9BVW6 85 aa6.5□□□□□ -1.37
PDPN-206ENST00000488631 HERC2O95714 4834 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 FAT2Q9NYQ8 4349 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 TRBV24-1A0A075B6N3 115 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 H3BS24 57 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 PHOX2AO14813 284 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 ESDP10768 282 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 RHEBQ15382 184 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 RNASE13Q5GAN3 156 aaKnown RBP6.49□□□□□ -1.37
PDPN-206ENST00000488631 CFAP161Q6P656 301 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 ZNF664Q8N3J9 261 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 CHCHD10Q8WYQ3 142 aaPredicted RBP6.49□□□□□ -1.37
PDPN-206ENST00000488631 HECTD4Q9Y4D8 3996 aa6.49□□□□□ -1.37
PDPN-206ENST00000488631 TRAV9-1A0A075B6T8 112 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 SNAPINO95295 136 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 MALP21145 153 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 KIAA1644Q3SXP7 199 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 LINC01620Q4KN68 170 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 SVBPQ8N300 66 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 DPH3Q96FX2 82 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 LAMTOR2Q9Y2Q5 125 aa6.48□□□□□ -1.37
PDPN-206ENST00000488631 CCL25O15444 150 aa6.47□□□□□ -1.37
PDPN-206ENST00000488631 CDK2AP2O75956 126 aa6.47□□□□□ -1.37
PDPN-206ENST00000488631 FABP9Q0Z7S8 132 aa6.47□□□□□ -1.37
PDPN-206ENST00000488631 CARHSP1Q9Y2V2 147 aaKnown RBP6.47□□□□□ -1.37
PDPN-206ENST00000488631 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.46□□□□□ -1.38
PDPN-206ENST00000488631 LINC00959A0A1B0GUT2 108 aa6.46□□□□□ -1.38
PDPN-206ENST00000488631 IFI27P40305 119 aaPredicted RBP6.46□□□□□ -1.38
PDPN-206ENST00000488631 RPL39P62891 51 aaKnown RBP6.46□□□□□ -1.38
PDPN-206ENST00000488631 RPL32P62910 135 aaKnown RBP6.46□□□□□ -1.38
PDPN-206ENST00000488631 HAMPP81172 84 aa6.46□□□□□ -1.38
PDPN-206ENST00000488631 COX19Q49B96 90 aa6.46□□□□□ -1.38
PDPN-206ENST00000488631 HIGD2BQ4VC39 106 aa6.46□□□□□ -1.38
PDPN-206ENST00000488631 SLC7A5P1Q8MH63 180 aa6.46□□□□□ -1.38
PDPN-206ENST00000488631 PRSS3P2Q8NHM4 247 aa6.46□□□□□ -1.38
PDPN-206ENST00000488631 CDC42SE2Q9NRR3 84 aa6.46□□□□□ -1.38
PDPN-206ENST00000488631 UBE2D4Q9Y2X8 147 aa6.46□□□□□ -1.38
PDPN-206ENST00000488631 PRSS1P07477 247 aa6.45□□□□□ -1.38
PDPN-206ENST00000488631 ORMDL2Q53FV1 153 aa6.45□□□□□ -1.38
PDPN-206ENST00000488631 C10orf91Q5T1B1 145 aa6.45□□□□□ -1.38
PDPN-206ENST00000488631 Q6ZUT4 128 aa6.45□□□□□ -1.38
PDPN-206ENST00000488631 MRPL52Q86TS9 123 aaKnown RBP6.45□□□□□ -1.38
PDPN-206ENST00000488631 Q8N8P6 123 aa6.45□□□□□ -1.38
PDPN-206ENST00000488631 SMCO4Q9NRQ5 59 aa6.45□□□□□ -1.38
PDPN-206ENST00000488631 SPANXA1Q9NS26 97 aa6.45□□□□□ -1.38
PDPN-206ENST00000488631 IFITM10A6NMD0 228 aa6.44□□□□□ -1.38
PDPN-206ENST00000488631 C1orf196B1AJZ1 125 aa6.44□□□□□ -1.38
PDPN-206ENST00000488631 Q6ZN92 141 aa6.44□□□□□ -1.38
PDPN-206ENST00000488631 GNB1LQ9BYB4 327 aa6.44□□□□□ -1.38
PDPN-206ENST00000488631 NXT2Q9NPJ8 142 aaKnown RBP6.44□□□□□ -1.38
PDPN-206ENST00000488631 CYSLTR1Q9Y271 337 aa6.44□□□□□ -1.38
PDPN-206ENST00000488631 TRAPPC1Q9Y5R8 145 aa6.44□□□□□ -1.38
PDPN-206ENST00000488631 DNAH11Q96DT5 4516 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 TGIF2-C20orf24A0A0A6YYL0 155 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 ZNF561-AS1K7EIQ3 104 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 COX7A2LO14548 114 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
PDPN-206ENST00000488631 MT-ND6P03923 174 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 G0S2P27469 103 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 CD164L2Q6UWJ8 174 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 FA2HQ7L5A8 372 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 OPRPNQ99935 248 aaPredicted RBP6.43□□□□□ -1.38
PDPN-206ENST00000488631 C2orf88Q9BSF0 95 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 TIMM21Q9BVV7 248 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
PDPN-206ENST00000488631 PKD1P98161 4303 aa6.42□□□□□ -1.38
PDPN-206ENST00000488631 IGHV1-58A0A0C4DH39 117 aa6.42□□□□□ -1.38
PDPN-206ENST00000488631 FOXI1Q12951 378 aa6.42□□□□□ -1.38
PDPN-206ENST00000488631 KRTAP26-1Q6PEX3 210 aa6.42□□□□□ -1.38
PDPN-206ENST00000488631 C2orf66Q6UXQ4 117 aa6.42□□□□□ -1.38
PDPN-206ENST00000488631 C5orf38Q86SI9 138 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms