RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TRAV7A0A075B6U4 112 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 IGHV7-81A0A0B4J1V7 117 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 A8MZ25 164 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 C20orf197Q8N268 126 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 C14orf132Q9NPU4 83 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 SDK1Q7Z5N4 2213 aa3.41□□□□□ -1.86
CDC42BPA-213ENST00000488131 TRAV13-2A0A0B4J235 113 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGHV3-66A0A0C4DH42 116 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 NDUFC1O43677 76 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 CCKP06307 115 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 FAM27E3Q08E93 113 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 ODF3L2Q3SX64 289 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 TMEM105Q8N8V8 129 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 CCL17Q92583 94 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 PRUNE2Q8WUY3 3088 aa3.4□□□□□ -1.87
CDC42BPA-213ENST00000488131 TRIOO75962 3097 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGHV3-16A0A0C4DH30 117 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGHV3-35A0A0C4DH35 117 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 H0YGX0 51 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 C9orf129Q5T035 196 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGFL2Q6UWQ7 119 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 C1orf158Q8N1D5 194 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 ZNF625Q96I27 306 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 URB1O60287 2271 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 CFAP47Q6ZTR5 3102 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 A0A1W2PNU3 283 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 ZZEF1O43149 2961 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 HILS1P60008 231 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 PRB3Q04118 309 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 SS18Q15532 418 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 C10orf25Q5T742 122 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 MINOS1Q5TGZ0 78 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 DEFB104AQ8WTQ1 72 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 Q9H8V8 135 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 Q9HAA7 133 aa3.39□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGHV3OR16-13A0A075B7E8 117 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGHV3-74A0A0B4J1X5 117 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 CRPP02741 224 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 C6orf226Q5I0X4 101 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 FAM74A4Q5TZK3 123 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 CLEC19AQ6UXS0 136 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 Q8N9W7 124 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 WFDC11Q8NEX6 87 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 LINC00167Q96N53 147 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 CHCHD7Q9BUK0 85 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 CDKN2A-AS1Q9UH64 79 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 FAM215AQ9Y5M1 114 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 ICE1Q9Y2F5 2266 aa3.38□□□□□ -1.87
CDC42BPA-213ENST00000488131 TRAV23DV6A0A075B6W5 121 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 A0A087WYN8 130 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGHV3-49A0A0A0MS15 119 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 TRBV7-6A0A0J9YX20 115 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 KRTAP10-11P60412 298 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 MINOS1-NBL1R4GNA1 71 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGKV2-29A2NJV5 120 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 SMIM1B2RUZ4 78 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 JMJD7-PLA2G4BH0Y9G9 81 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 NDUFA4O00483 81 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 BLCAPP62952 87 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 LINC00337Q8N6G1 96 aa3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGKV2-28A0A075B6P5 120 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 F6UB75 175 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 NCR3O14931 201 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 ATP6V0E1O15342 81 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGKV2D-28P01615 120 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 HOXD3P31249 432 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 BSPH1Q075Z2 132 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 ENHOQ6UWT2 76 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 FAM19A1Q7Z5A9 133 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 PRR15Q8IV56 129 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 MIR7-3HGQ8N6C7 128 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 SMIM11BQ8TCY0 68 aa3.36□□□□□ -1.87
CDC42BPA-213ENST00000488131 DSPP15924 2871 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 F8WEM9 126 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 LY6G6DO95868 133 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 GNLYP22749 145 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 DEFB1P60022 68 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 ECSCRQ19T08 205 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 RNASE13Q5GAN3 156 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 ATP1A1-AS1Q5TC04 95 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 Q6ZRU5 148 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 ORMDL1Q9P0S3 153 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 LINC00474Q9P2X8 69 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 LAMTOR3Q9UHA4 124 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 TNRC18O15417 2968 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 WNK2Q9Y3S1 2297 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 IGHV1OR15-1A0A075B7D0 117 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 TRBV7-4A0A0J9YYF1 115 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 PLAC8L1A1L4L8 177 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 ERC2-IT1O76042 136 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 LINC00242Q5T6M2 205 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 LINC00467Q9BRT7 94 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 UBL5Q9BZL1 73 aa3.35□□□□□ -1.87
CDC42BPA-213ENST00000488131 ABCA4P78363 2273 aa3.34□□□□□ -1.87
CDC42BPA-213ENST00000488131 CUL9Q8IWT3 2517 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms