RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PIGPP57054 158 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 KRTAP10-10P60014 251 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 ZNF266Q14584 549 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 IAH1Q2TAA2 248 aaPredicted RBP2.54□□□□□ -2
BRCA1-217ENST00000487825 SP6Q3SY56 376 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 LAIR2Q6ISS4 152 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 C12orf57Q99622 126 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 MAP1LC3BQ9GZQ8 125 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 LINC00474Q9P2X8 69 aa2.54□□□□□ -2
BRCA1-217ENST00000487825 NEBP20929 6669 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 IGHV3-73A0A0B4J1V6 119 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 A0A1W2PRE2 83 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 M0R3E3 92 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 AGPAT2O15120 278 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 CDS2O95674 445 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 MT-ND6P03923 174 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 ANGP03950 147 aaKnown RBP2.53□□□□□ -2
BRCA1-217ENST00000487825 IGLV7-43P04211 117 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 PMAIP1Q13794 54 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 MPV17L2Q567V2 206 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 C1orf137Q5JT78 98 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 PATE2Q6UY27 113 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 SCGB1D4Q6XE38 83 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 CYP2G1PQ6ZSU1 146 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 BPIFA4PQ86YQ2 179 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 OR51S1Q8NGJ8 323 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 TCEAL7Q9BRU2 100 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 SAMD10Q9BYL1 202 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 SLIRPQ9GZT3 109 aaKnown RBP2.53□□□□□ -2
BRCA1-217ENST00000487825 RPP21Q9H633 154 aaKnown RBP2.53□□□□□ -2
BRCA1-217ENST00000487825 ZNF492Q9P255 531 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 MTFP1Q9UDX5 166 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 SS18L2Q9UHA2 77 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 PSG8Q9UQ74 426 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
BRCA1-217ENST00000487825 FAM25AB3EWG3 89 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 FAM25CB3EWG5 89 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 FAM25GB3EWG6 89 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 C8orf87E5RJ46 101 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 H3BQ15 152 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 NDUFS5O43920 106 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 IL5P05113 134 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 SMIM6P0DI80 62 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 RPS10P46783 165 aaKnown RBP2.52□□□□□ -2.01
BRCA1-217ENST00000487825 CKS1BP61024 79 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 AKR1C1Q04828 323 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 AKR1C8PQ5T2L2 129 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 Q6AWC8 147 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 TEX43Q6ZNM6 134 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 CCDC32Q9BV29 185 aa2.52□□□□□ -2.01
BRCA1-217ENST00000487825 LYRM2Q9NU23 88 aaPredicted RBP2.52□□□□□ -2.01
BRCA1-217ENST00000487825 RSL24D1Q9UHA3 163 aaKnown RBP2.52□□□□□ -2.01
BRCA1-217ENST00000487825 IGKV2-40A0A087WW87 121 aaPredicted RBP2.51□□□□□ -2.01
BRCA1-217ENST00000487825 C9orf170A2RU37 121 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 FAM24AA6NFZ4 105 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 TMEM262E9PQX1 116 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 KRTAP4-16G5E9R7 235 aaPredicted RBP2.51□□□□□ -2.01
BRCA1-217ENST00000487825 PSPHP1O15172 72 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 HMGB3O15347 200 aaKnown RBP2.51□□□□□ -2.01
BRCA1-217ENST00000487825 IGKV2D-40P01614 121 aaPredicted RBP2.51□□□□□ -2.01
BRCA1-217ENST00000487825 PSMB2P49721 201 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 SELENOTP62341 195 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 CLPSL2Q6UWE3 100 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 GOLT1AQ6ZVE7 132 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 LINC00305Q7Z4B0 112 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 LHFPL1Q86WI0 220 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 C15orf56Q8N910 161 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 OR5H6Q8NGV6 325 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 CNBD2Q96M20 576 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 VPS25Q9BRG1 176 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 GGACTQ9BVM4 153 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 SLC39A9Q9NUM3 307 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 COPZ2Q9P299 210 aa2.51□□□□□ -2.01
BRCA1-217ENST00000487825 BORCS7-ASMTA0A0B4J1R7 106 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 K7EPK0 472 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 M0R2T5 61 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 GNRH2O43555 120 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 GZMBP10144 247 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 PRSS3P35030 304 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 RPS20P60866 119 aaKnown RBP2.5□□□□□ -2.01
BRCA1-217ENST00000487825 ZFP2Q6ZN57 461 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 LINC00173Q6ZV60 143 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 FA2HQ7L5A8 372 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 NKAPP1Q8N9T2 125 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 DUSP21Q9H596 190 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 PKIGQ9Y2B9 76 aa2.5□□□□□ -2.01
BRCA1-217ENST00000487825 TRBV19A0A075B6N1 114 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 TRBV6-8A0A0A6YYG3 113 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 FAM236DA0A1B0GTK5 79 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 A0A1B0GX51 115 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 TRDV1A0A1B0GX56 115 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 FAM236CP0DP71 79 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 BTCP35070 178 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 PKIAP61925 76 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 RPS28P62857 69 aaKnown RBP2.49□□□□□ -2.01
BRCA1-217ENST00000487825 LINC00269Q8N2A0 174 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 OR13C8Q8NGS7 320 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 OR2T35Q8NGX2 323 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 OR2G3Q8NGZ4 309 aa2.49□□□□□ -2.01
BRCA1-217ENST00000487825 SMIM8Q96KF7 97 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms