RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MLH3Q9UHC1 1453 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 SHANK2Q9UPX8 1470 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 TOPAZ1Q8N9V7 1692 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 MYH9P35579 1960 aaKnown RBP0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 TET1Q8NFU7 2136 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 GVQW2A0A096LPI5 108 aaPredicted RBP0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 A0A0G2JND7 137 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 SYS1-DBNDD2H3BUS1 97 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 UQCRHP07919 91 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 MGPP08493 103 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 PMCHL1Q16048 86 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 PYY3Q5JQD4 70 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 Q6ZRX8 168 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 LAMC3Q9Y6N6 1575 aa0.85□□□□□ -2.27
HMGB1P36-201ENST00000487709 EHBP1L1Q8N3D4 1523 aa0.84□□□□□ -2.27
HMGB1P36-201ENST00000487709 SPAG17Q6Q759 2223 aa0.84□□□□□ -2.27
HMGB1P36-201ENST00000487709 TRBV25-1A0A075B6N4 114 aa0.84□□□□□ -2.27
HMGB1P36-201ENST00000487709 A0A1B0GWA3 101 aa0.84□□□□□ -2.27
HMGB1P36-201ENST00000487709 ZNF137PP52743 207 aa0.84□□□□□ -2.27
HMGB1P36-201ENST00000487709 SPINK9Q5DT21 86 aa0.84□□□□□ -2.27
HMGB1P36-201ENST00000487709 FAM223AQ8IWN6 122 aa0.84□□□□□ -2.27
HMGB1P36-201ENST00000487709 ZMYM4Q5VZL5 1548 aa0.84□□□□□ -2.28
HMGB1P36-201ENST00000487709 MYO18AQ92614 2054 aaKnown RBP0.84□□□□□ -2.28
HMGB1P36-201ENST00000487709 DIP2CQ9Y2E4 1556 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 PHIPQ8WWQ0 1821 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 ZNF815PA8K554 130 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 PSMG4Q5JS54 123 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 PRO1933Q9H354 126 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 MYOM1P52179 1685 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 FBN2P35556 2912 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 HMGXB3Q12766 1538 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 ARHGEF12Q9NZN5 1544 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 AKAP12Q02952 1782 aa0.83□□□□□ -2.28
HMGB1P36-201ENST00000487709 TOP2BQ02880 1626 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 CCDC18Q5T9S5 1454 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 ANKRD26Q9UPS8 1709 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 MARF1Q9Y4F3 1742 aaKnown RBP0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 FAM223BA6NKX1 122 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 H7BZZ5 65 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 K7EP34 96 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 PIN1P1O15428 100 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 SMIM11AP58511 58 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 PEA15Q15121 130 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 ZNF720Q7Z2F6 126 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 LCN9Q8WX39 176 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 S100A16Q96FQ6 103 aaKnown RBP0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 PROK2Q9HC23 129 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 CASP8AP2Q9UKL3 1982 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 ABCC3O15438 1527 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 AFDNP55196 1824 aaKnown RBP0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 PATJQ8NI35 1801 aa0.82□□□□□ -2.28
HMGB1P36-201ENST00000487709 ABCA3Q99758 1704 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 CHD3Q12873 2000 aaKnown RBP0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 EPRSP07814 1512 aaKnown RBP0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 M0R3E3 92 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 BCE1O60756 84 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 CYB5AP00167 134 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 S100A3P33764 101 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 C20orf78Q9BR46 151 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 RABAC1Q9UI14 185 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 UNC13BO14795 1591 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 TET3O43151 1660 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 KDM5AP29375 1690 aaKnown RBP0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 PLIN4Q96Q06 1357 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 UACAQ9BZF9 1416 aa0.81□□□□□ -2.28
HMGB1P36-201ENST00000487709 MED14O60244 1454 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 ATP10BO94823 1461 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 CNTRLQ7Z7A1 2325 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 C7orf77A4D0Y5 90 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 G3V318 75 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 ETDBQ3ZM63 59 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 UBE2DNLQ8IWF7 75 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 TMEM263Q8WUH6 116 aaKnown RBP0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 PRDM2Q13029 1718 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 SIPA1L3O60292 1781 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 CEP162Q5TB80 1403 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 EDC4Q6P2E9 1401 aaKnown RBP0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 DOCK1Q14185 1865 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 FANCAO15360 1455 aa0.8□□□□□ -2.28
HMGB1P36-201ENST00000487709 ABCC2Q92887 1545 aa0.79□□□□□ -2.28
HMGB1P36-201ENST00000487709 NINQ8N4C6 2090 aa0.79□□□□□ -2.28
HMGB1P36-201ENST00000487709 CHD1O14646 1710 aa0.79□□□□□ -2.28
HMGB1P36-201ENST00000487709 HAMPP81172 84 aa0.79□□□□□ -2.28
HMGB1P36-201ENST00000487709 HMGN3Q15651 99 aa0.79□□□□□ -2.28
HMGB1P36-201ENST00000487709 Q6JHZ5 121 aa0.79□□□□□ -2.28
HMGB1P36-201ENST00000487709 S100A13Q99584 98 aa0.79□□□□□ -2.28
HMGB1P36-201ENST00000487709 PARP14Q460N5 1801 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 C10orf142B7Z368 130 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 NMBP08949 121 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 ARMS2P0C7Q2 107 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 ZGRF1Q86YA3 2104 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 SPRR4Q96PI1 79 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 LINC00472Q9H8W2 130 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 LINC00846Q9NV44 126 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 HIGD1BQ9P298 99 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 IQSEC2Q5JU85 1478 aa0.78□□□□□ -2.28
HMGB1P36-201ENST00000487709 SSC5DA1L4H1 1573 aa0.78□□□□□ -2.29
HMGB1P36-201ENST00000487709 ARHGEF5Q12774 1597 aa0.78□□□□□ -2.29
HMGB1P36-201ENST00000487709 KIF21AQ7Z4S6 1674 aa0.78□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms