RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 NOL3O60936 208 aaKnown RBP6.98□□□□□ -1.29
SGIP1-212ENST00000487507 ZNF25P17030 456 aaPredicted RBP6.98□□□□□ -1.29
SGIP1-212ENST00000487507 SMCPP49901 116 aaPredicted RBP6.98□□□□□ -1.29
SGIP1-212ENST00000487507 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
SGIP1-212ENST00000487507 OR2D3Q8NGH3 330 aa6.98□□□□□ -1.29
SGIP1-212ENST00000487507 SYNE2Q8WXH0 6885 aaKnown RBP6.98□□□□□ -1.29
SGIP1-212ENST00000487507 H2AFB2P0C5Z0 115 aa6.97□□□□□ -1.29
SGIP1-212ENST00000487507 LINC00242Q5T6M2 205 aa6.97□□□□□ -1.29
SGIP1-212ENST00000487507 ACTR3CQ9C0K3 210 aaPredicted RBP6.97□□□□□ -1.29
SGIP1-212ENST00000487507 CCDC160A6NGH7 325 aa6.96□□□□□ -1.3
SGIP1-212ENST00000487507 IL7P13232 177 aa6.96□□□□□ -1.3
SGIP1-212ENST00000487507 ATP6V0CP27449 155 aa6.96□□□□□ -1.3
SGIP1-212ENST00000487507 AKR1C3P42330 323 aa6.96□□□□□ -1.3
SGIP1-212ENST00000487507 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
SGIP1-212ENST00000487507 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
SGIP1-212ENST00000487507 RPL39LQ96EH5 51 aaKnown RBP6.96□□□□□ -1.3
SGIP1-212ENST00000487507 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
SGIP1-212ENST00000487507 IGKV2D-26A0A0A0MRZ7 120 aa6.95□□□□□ -1.3
SGIP1-212ENST00000487507 PLA2G10O15496 165 aa6.95□□□□□ -1.3
SGIP1-212ENST00000487507 LYRM1O43325 122 aa6.95□□□□□ -1.3
SGIP1-212ENST00000487507 UNQ6190/PRO20217Q6UXQ8 127 aa6.95□□□□□ -1.3
SGIP1-212ENST00000487507 PPP1R1CQ8WVI7 109 aa6.95□□□□□ -1.3
SGIP1-212ENST00000487507 SMDT1Q9H4I9 107 aa6.95□□□□□ -1.3
SGIP1-212ENST00000487507 C6orf48Q9UBA6 75 aa6.95□□□□□ -1.3
SGIP1-212ENST00000487507 ALG5Q9Y673 324 aa6.95□□□□□ -1.3
SGIP1-212ENST00000487507 G3V3Q6 166 aa6.94□□□□□ -1.3
SGIP1-212ENST00000487507 NDUFA1O15239 70 aa6.94□□□□□ -1.3
SGIP1-212ENST00000487507 NUPR1O60356 82 aa6.94□□□□□ -1.3
SGIP1-212ENST00000487507 NCR2O95944 276 aa6.94□□□□□ -1.3
SGIP1-212ENST00000487507 GATD1Q8NB37 220 aa6.94□□□□□ -1.3
SGIP1-212ENST00000487507 STOML3Q8TAV4 291 aa6.94□□□□□ -1.3
SGIP1-212ENST00000487507 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
SGIP1-212ENST00000487507 CDC42SE2Q9NRR3 84 aa6.94□□□□□ -1.3
SGIP1-212ENST00000487507 TRAV13-1A0A0B4J241 112 aa6.93□□□□□ -1.3
SGIP1-212ENST00000487507 C1orf196B1AJZ1 125 aa6.93□□□□□ -1.3
SGIP1-212ENST00000487507 INMT-MINDY4F8WBC2 141 aa6.93□□□□□ -1.3
SGIP1-212ENST00000487507 C9orf129Q5T035 196 aaKnown RBP6.93□□□□□ -1.3
SGIP1-212ENST00000487507 CST9LP1Q5W188 147 aa6.93□□□□□ -1.3
SGIP1-212ENST00000487507 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
SGIP1-212ENST00000487507 MPC2O95563 127 aa6.92□□□□□ -1.3
SGIP1-212ENST00000487507 MBP02144 154 aa6.92□□□□□ -1.3
SGIP1-212ENST00000487507 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
SGIP1-212ENST00000487507 TRGC1P0CF51 173 aa6.92□□□□□ -1.3
SGIP1-212ENST00000487507 ZNF726P1Q15940 193 aa6.92□□□□□ -1.3
SGIP1-212ENST00000487507 MZT2BQ6NZ67 158 aa6.92□□□□□ -1.3
SGIP1-212ENST00000487507 NKX6-2Q9C056 277 aaPredicted RBP6.92□□□□□ -1.3
SGIP1-212ENST00000487507 SDHAF1A6NFY7 115 aa6.91□□□□□ -1.3
SGIP1-212ENST00000487507 PMCHP20382 165 aa6.91□□□□□ -1.3
SGIP1-212ENST00000487507 BCE1O60756 84 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 H2BFSP57053 126 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 CT83Q5H943 113 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 BAGE2Q86Y30 109 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 OR10D4PQ8NGN7 298 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 MRAP2Q96G30 205 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 PSMG3Q9BT73 122 aaPredicted RBP6.9□□□□□ -1.3
SGIP1-212ENST00000487507 TMEM242Q9NWH2 141 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 UBE2D4Q9Y2X8 147 aa6.9□□□□□ -1.3
SGIP1-212ENST00000487507 PET100P0DJ07 73 aa6.89□□□□□ -1.31
SGIP1-212ENST00000487507 CTRLP40313 264 aa6.89□□□□□ -1.31
SGIP1-212ENST00000487507 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
SGIP1-212ENST00000487507 C3orf22Q8N5N4 141 aa6.89□□□□□ -1.31
SGIP1-212ENST00000487507 C22orf24Q9Y442 160 aa6.89□□□□□ -1.31
SGIP1-212ENST00000487507 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
SGIP1-212ENST00000487507 CTXND1A0A1B0GTU2 59 aa6.88□□□□□ -1.31
SGIP1-212ENST00000487507 I3L3M4 83 aa6.88□□□□□ -1.31
SGIP1-212ENST00000487507 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
SGIP1-212ENST00000487507 LYZL1Q6UWQ5 148 aa6.88□□□□□ -1.31
SGIP1-212ENST00000487507 TNFSF18Q9UNG2 199 aa6.88□□□□□ -1.31
SGIP1-212ENST00000487507 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
SGIP1-212ENST00000487507 SCO2A0A1W2PP80 73 aa6.87□□□□□ -1.31
SGIP1-212ENST00000487507 LCE2BO14633 110 aa6.87□□□□□ -1.31
SGIP1-212ENST00000487507 SERF2P84101 59 aa6.87□□□□□ -1.31
SGIP1-212ENST00000487507 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
SGIP1-212ENST00000487507 A0A1B0GVG6 124 aa6.86□□□□□ -1.31
SGIP1-212ENST00000487507 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
SGIP1-212ENST00000487507 TWIST1Q15672 202 aa6.86□□□□□ -1.31
SGIP1-212ENST00000487507 MRPL52Q86TS9 123 aaKnown RBP6.86□□□□□ -1.31
SGIP1-212ENST00000487507 RNASE7Q9H1E1 156 aaKnown RBP6.86□□□□□ -1.31
SGIP1-212ENST00000487507 IGLV8-61A0A075B6I0 122 aa6.85□□□□□ -1.31
SGIP1-212ENST00000487507 FAM240BA0A1B0GVZ2 78 aa6.85□□□□□ -1.31
SGIP1-212ENST00000487507 RPL37AP8A6NKH3 93 aa6.85□□□□□ -1.31
SGIP1-212ENST00000487507 UBE2AP49459 152 aa6.85□□□□□ -1.31
SGIP1-212ENST00000487507 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
SGIP1-212ENST00000487507 MARVELD1Q9BSK0 173 aa6.85□□□□□ -1.31
SGIP1-212ENST00000487507 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
SGIP1-212ENST00000487507 F8WDY8 70 aa6.84□□□□□ -1.31
SGIP1-212ENST00000487507 PAGE4O60829 102 aa6.84□□□□□ -1.31
SGIP1-212ENST00000487507 CTAG1AP78358 180 aa6.84□□□□□ -1.31
SGIP1-212ENST00000487507 DAND5Q8N907 189 aa6.84□□□□□ -1.31
SGIP1-212ENST00000487507 C7orf77A4D0Y5 90 aa6.83□□□□□ -1.32
SGIP1-212ENST00000487507 MAP1LC3B2A6NCE7 125 aa6.83□□□□□ -1.32
SGIP1-212ENST00000487507 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
SGIP1-212ENST00000487507 RPS20P60866 119 aaKnown RBP6.83□□□□□ -1.32
SGIP1-212ENST00000487507 XP32Q5T750 250 aa6.83□□□□□ -1.32
SGIP1-212ENST00000487507 C2orf82Q6UX34 121 aa6.83□□□□□ -1.32
SGIP1-212ENST00000487507 Q6ZUT4 128 aa6.83□□□□□ -1.32
SGIP1-212ENST00000487507 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
SGIP1-212ENST00000487507 CCDC32Q9BV29 185 aa6.83□□□□□ -1.32
SGIP1-212ENST00000487507 MAP1LC3BQ9GZQ8 125 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms