RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CYSLTR1Q9Y271 337 aa12.94□□□□□ -0.34
PCOLCE-208ENST00000487172 PYGO1Q9Y3Y4 419 aa12.94□□□□□ -0.34
PCOLCE-208ENST00000487172 DNAH2Q9P225 4427 aa12.93□□□□□ -0.34
PCOLCE-208ENST00000487172 TRAV8-4A0A0B4J246 113 aa12.93□□□□□ -0.34
PCOLCE-208ENST00000487172 PRSS29PA6NIE9 313 aa12.93□□□□□ -0.34
PCOLCE-208ENST00000487172 C2orf66Q6UXQ4 117 aa12.93□□□□□ -0.34
PCOLCE-208ENST00000487172 FA2HQ7L5A8 372 aa12.93□□□□□ -0.34
PCOLCE-208ENST00000487172 LINC00614P0C842 121 aa12.92□□□□□ -0.34
PCOLCE-208ENST00000487172 RAB5BP61020 215 aa12.92□□□□□ -0.34
PCOLCE-208ENST00000487172 URB1-AS1Q96HZ7 61 aa12.92□□□□□ -0.34
PCOLCE-208ENST00000487172 C1orf43Q9BWL3 253 aa12.92□□□□□ -0.34
PCOLCE-208ENST00000487172 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
PCOLCE-208ENST00000487172 MRPS36P82909 103 aaKnown RBP12.91□□□□□ -0.34
PCOLCE-208ENST00000487172 CLPSL2Q6UWE3 100 aa12.91□□□□□ -0.34
PCOLCE-208ENST00000487172 AP5S1Q9NUS5 200 aa12.91□□□□□ -0.34
PCOLCE-208ENST00000487172 LINC01549A6NIU2 74 aa12.9□□□□□ -0.34
PCOLCE-208ENST00000487172 TNP2Q05952 138 aa12.9□□□□□ -0.34
PCOLCE-208ENST00000487172 DNAH10Q8IVF4 4471 aa12.9□□□□□ -0.35
PCOLCE-208ENST00000487172 PSCAO43653 123 aa12.89□□□□□ -0.35
PCOLCE-208ENST00000487172 NPSP0C0P6 89 aa12.89□□□□□ -0.35
PCOLCE-208ENST00000487172 FAM104AQ969W3 186 aa12.89□□□□□ -0.35
PCOLCE-208ENST00000487172 TOMM6Q96B49 74 aa12.89□□□□□ -0.35
PCOLCE-208ENST00000487172 KRTAP26-1Q6PEX3 210 aa12.88□□□□□ -0.35
PCOLCE-208ENST00000487172 Q6ZUT4 128 aa12.88□□□□□ -0.35
PCOLCE-208ENST00000487172 DNAH17Q9UFH2 4485 aa12.88□□□□□ -0.35
PCOLCE-208ENST00000487172 FRAS1Q86XX4 4008 aa12.87□□□□□ -0.35
PCOLCE-208ENST00000487172 IGIPA6NJ69 53 aa12.87□□□□□ -0.35
PCOLCE-208ENST00000487172 CCL25O15444 150 aa12.87□□□□□ -0.35
PCOLCE-208ENST00000487172 LINC00959A0A1B0GUT2 108 aa12.86□□□□□ -0.35
PCOLCE-208ENST00000487172 MAPKAPK5-AS1Q8N8E1 139 aa12.86□□□□□ -0.35
PCOLCE-208ENST00000487172 CHCHD1Q96BP2 118 aaKnown RBP12.86□□□□□ -0.35
PCOLCE-208ENST00000487172 TIMM17AQ99595 171 aa12.86□□□□□ -0.35
PCOLCE-208ENST00000487172 OPRPNQ99935 248 aaPredicted RBP12.86□□□□□ -0.35
PCOLCE-208ENST00000487172 IGLV10-54A0A075B6I4 117 aa12.85□□□□□ -0.35
PCOLCE-208ENST00000487172 IGLV4-3A0A075B6K6 122 aa12.85□□□□□ -0.35
PCOLCE-208ENST00000487172 A0A087WTM6 91 aa12.85□□□□□ -0.35
PCOLCE-208ENST00000487172 IGKV3OR2-268A0A0C4DH90 116 aa12.85□□□□□ -0.35
PCOLCE-208ENST00000487172 LRCOL1A6NCL2 159 aa12.85□□□□□ -0.35
PCOLCE-208ENST00000487172 A0A1B0GVY2 172 aa12.84□□□□□ -0.35
PCOLCE-208ENST00000487172 SS18Q15532 418 aa12.84□□□□□ -0.35
PCOLCE-208ENST00000487172 ERASQ7Z444 233 aa12.84□□□□□ -0.35
PCOLCE-208ENST00000487172 BAGE3Q86Y29 109 aa12.84□□□□□ -0.35
PCOLCE-208ENST00000487172 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
PCOLCE-208ENST00000487172 A0A096LNJ9 63 aa12.83□□□□□ -0.36
PCOLCE-208ENST00000487172 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
PCOLCE-208ENST00000487172 CHCHD10Q8WYQ3 142 aaPredicted RBP12.83□□□□□ -0.36
PCOLCE-208ENST00000487172 C1orf196B1AJZ1 125 aa12.82□□□□□ -0.36
PCOLCE-208ENST00000487172 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
PCOLCE-208ENST00000487172 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
PCOLCE-208ENST00000487172 AMELXQ99217 191 aa12.82□□□□□ -0.36
PCOLCE-208ENST00000487172 EREGO14944 169 aa12.81□□□□□ -0.36
PCOLCE-208ENST00000487172 HBDP02042 147 aa12.81□□□□□ -0.36
PCOLCE-208ENST00000487172 Q6ZN92 141 aa12.81□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BKO60814 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BJP06899 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BOP23527 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BBP33778 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BDP58876 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BCP62807 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST2H2BEQ16778 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 TEX43Q6ZNM6 134 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 BAALCQ8WXS3 180 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BHQ93079 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BNQ99877 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 HIST1H2BMQ99879 126 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 VCX2Q9H322 139 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 FAT2Q9NYQ8 4349 aa12.8□□□□□ -0.36
PCOLCE-208ENST00000487172 TRAV13-1A0A0B4J241 112 aa12.79□□□□□ -0.36
PCOLCE-208ENST00000487172 GAGE12HA6NDE8 117 aa12.79□□□□□ -0.36
PCOLCE-208ENST00000487172 PDZD11Q5EBL8 140 aa12.79□□□□□ -0.36
PCOLCE-208ENST00000487172 CD164L2Q6UWJ8 174 aa12.79□□□□□ -0.36
PCOLCE-208ENST00000487172 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
PCOLCE-208ENST00000487172 HSBP1O75506 76 aa12.78□□□□□ -0.36
PCOLCE-208ENST00000487172 LINC00310P59036 64 aa12.78□□□□□ -0.36
PCOLCE-208ENST00000487172 WFDC2Q14508 124 aa12.78□□□□□ -0.36
PCOLCE-208ENST00000487172 LINC00173Q6ZV60 143 aa12.78□□□□□ -0.36
PCOLCE-208ENST00000487172 C2orf88Q9BSF0 95 aa12.78□□□□□ -0.36
PCOLCE-208ENST00000487172 XCL1P47992 114 aa12.77□□□□□ -0.37
PCOLCE-208ENST00000487172 FOXI1Q12951 378 aa12.77□□□□□ -0.37
PCOLCE-208ENST00000487172 PMCHL1Q16048 86 aa12.77□□□□□ -0.37
PCOLCE-208ENST00000487172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.76□□□□□ -0.37
PCOLCE-208ENST00000487172 SERF1AO75920 110 aa12.76□□□□□ -0.37
PCOLCE-208ENST00000487172 UBE2D1P51668 147 aa12.76□□□□□ -0.37
PCOLCE-208ENST00000487172 Q8N814 137 aa12.76□□□□□ -0.37
PCOLCE-208ENST00000487172 ATP5LO75964 103 aa12.75□□□□□ -0.37
PCOLCE-208ENST00000487172 C14orf177Q52M58 125 aa12.75□□□□□ -0.37
PCOLCE-208ENST00000487172 ZC2HC1BQ5TFG8 222 aa12.75□□□□□ -0.37
PCOLCE-208ENST00000487172 FAM19A3Q7Z5A8 133 aa12.75□□□□□ -0.37
PCOLCE-208ENST00000487172 USP17L23D6RBM5 183 aa12.74□□□□□ -0.37
PCOLCE-208ENST00000487172 LECT2O14960 151 aa12.74□□□□□ -0.37
PCOLCE-208ENST00000487172 NUPR1O60356 82 aa12.73□□□□□ -0.37
PCOLCE-208ENST00000487172 LINC00242Q5T6M2 205 aa12.73□□□□□ -0.37
PCOLCE-208ENST00000487172 SPATA12Q7Z6I5 190 aa12.73□□□□□ -0.37
PCOLCE-208ENST00000487172 FAM19A2Q8N3H0 131 aa12.73□□□□□ -0.37
PCOLCE-208ENST00000487172 NTN5Q8WTR8 489 aaPredicted RBP12.73□□□□□ -0.37
PCOLCE-208ENST00000487172 PGPEP1Q9NXJ5 209 aa12.73□□□□□ -0.37
PCOLCE-208ENST00000487172 IGHV3OR16-9A0A0B4J2B5 98 aa12.72□□□□□ -0.37
PCOLCE-208ENST00000487172 PMVKQ15126 192 aa12.72□□□□□ -0.37
PCOLCE-208ENST00000487172 CFAP161Q6P656 301 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms