RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 VCX2Q9H322 139 aa4.97□□□□□ -1.61
SF3A3-206ENST00000487062 C11orf68Q9H3H3 251 aaKnown RBP4.97□□□□□ -1.61
SF3A3-206ENST00000487062 MRPL35Q9NZE8 188 aaKnown RBP4.97□□□□□ -1.61
SF3A3-206ENST00000487062 IGLV4-3A0A075B6K6 122 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 TRBV25-1A0A075B6N4 114 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.96□□□□□ -1.62
SF3A3-206ENST00000487062 LOC100131303A0A0U1RQF7 123 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 IGKV2-29A2NJV5 120 aaPredicted RBP4.96□□□□□ -1.62
SF3A3-206ENST00000487062 H7C423 109 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 DLEU1O43261 78 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 LINC00694P0DN24 101 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 DEFB121Q5J5C9 76 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 SLC25A34Q6PIV7 304 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 ATP6V0E2Q8NHE4 81 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 SPATA25Q9BR10 227 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 TMEM243Q9BU79 118 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 CST9LQ9H4G1 147 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 RETNQ9HD89 108 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 CELA1Q9UNI1 258 aa4.96□□□□□ -1.62
SF3A3-206ENST00000487062 COL6A5A8TX70 2615 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 F5H768 121 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 K7EIL1 84 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 ZNF25P17030 456 aaPredicted RBP4.95□□□□□ -1.62
SF3A3-206ENST00000487062 HERVK_113P61574 105 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 MRPS36P82909 103 aaKnown RBP4.95□□□□□ -1.62
SF3A3-206ENST00000487062 ZC2HC1BQ5TFG8 222 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 AMMECR1LQ6DCA0 310 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 SH2D6Q7Z4S9 175 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 TMEM101Q96IK0 257 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 UBE2D4Q9Y2X8 147 aa4.95□□□□□ -1.62
SF3A3-206ENST00000487062 CSDC2Q9Y534 153 aaKnown RBP4.95□□□□□ -1.62
SF3A3-206ENST00000487062 TRBV6-8A0A0A6YYG3 113 aa4.94□□□□□ -1.62
SF3A3-206ENST00000487062 COX8AP10176 69 aa4.94□□□□□ -1.62
SF3A3-206ENST00000487062 FGF6P10767 208 aa4.94□□□□□ -1.62
SF3A3-206ENST00000487062 HTN3P15516 51 aa4.94□□□□□ -1.62
SF3A3-206ENST00000487062 HNRNPA3P51991 378 aaKnown RBP4.94□□□□□ -1.62
SF3A3-206ENST00000487062 MRPL23Q16540 153 aaKnown RBP4.94□□□□□ -1.62
SF3A3-206ENST00000487062 NTM-AS1Q6ZSK4 140 aa4.94□□□□□ -1.62
SF3A3-206ENST00000487062 SBSPONQ8IVN8 264 aa4.94□□□□□ -1.62
SF3A3-206ENST00000487062 STPG4Q8N801 248 aa4.94□□□□□ -1.62
SF3A3-206ENST00000487062 AMELXQ99217 191 aa4.94□□□□□ -1.62
SF3A3-206ENST00000487062 OPRPNQ99935 248 aaPredicted RBP4.94□□□□□ -1.62
SF3A3-206ENST00000487062 IGLV4-69A0A075B6H9 119 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 TRAV26-1A0A087WT03 109 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 A0A0J9YY99 117 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 C11orf86A6NJI1 115 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 PRB2P02812 416 aaPredicted RBP4.93□□□□□ -1.62
SF3A3-206ENST00000487062 NMUP48645 174 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 C12orf74Q32Q52 190 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 CEMP1Q6PRD7 247 aaPredicted RBP4.93□□□□□ -1.62
SF3A3-206ENST00000487062 NFE4Q86UQ8 179 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 OR5A1Q8NGJ0 315 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 VSIG2Q96IQ7 327 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 TM2D3Q9BRN9 247 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 CHCHD5Q9BSY4 110 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 CHAC1Q9BUX1 264 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 MRPS16Q9Y3D3 137 aaKnown RBP4.93□□□□□ -1.62
SF3A3-206ENST00000487062 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 PKD1L1Q8TDX9 2849 aa4.93□□□□□ -1.62
SF3A3-206ENST00000487062 A0A0J9YWU9 116 aa4.92□□□□□ -1.62
SF3A3-206ENST00000487062 H3BNG1 76 aa4.92□□□□□ -1.62
SF3A3-206ENST00000487062 SEC11AP67812 179 aa4.92□□□□□ -1.62
SF3A3-206ENST00000487062 GAGE6Q13070 117 aa4.92□□□□□ -1.62
SF3A3-206ENST00000487062 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
SF3A3-206ENST00000487062 Q6ZUT4 128 aa4.92□□□□□ -1.62
SF3A3-206ENST00000487062 C11orf45Q8TAV5 145 aa4.92□□□□□ -1.62
SF3A3-206ENST00000487062 ORAOV1Q8WV07 137 aa4.92□□□□□ -1.62
SF3A3-206ENST00000487062 CMYA5Q8N3K9 4069 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 NBEAL2Q6ZNJ1 2754 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 A0A0J9YXV3 536 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 TINCRA0A1B0GVN0 87 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 E9PLD3 99 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 SIVA1O15304 175 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 RNASE13Q5GAN3 156 aaKnown RBP4.91□□□□□ -1.62
SF3A3-206ENST00000487062 BOD1L2Q8IYS8 172 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 MRAPQ8TCY5 172 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
SF3A3-206ENST00000487062 CDC42SE2Q9NRR3 84 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 TRRAPQ9Y4A5 3859 aa4.91□□□□□ -1.62
SF3A3-206ENST00000487062 A0A096LPF7 62 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 GAGE10A6NGK3 116 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 TMEM262E9PQX1 116 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 H3BRM9 83 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 PLA2G1BP04054 148 aaKnown RBP4.9□□□□□ -1.63
SF3A3-206ENST00000487062 ZNF22P17026 224 aaPredicted RBP4.9□□□□□ -1.63
SF3A3-206ENST00000487062 GCSHP23434 173 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 UBE2D1P51668 147 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 TCTAP57738 103 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 TIRAPP58753 221 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 HERVK_113P63121 156 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 Q6ZTC4 211 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 FAM19A3Q7Z5A8 133 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 FAM104AQ969W3 186 aa4.9□□□□□ -1.63
SF3A3-206ENST00000487062 DEFB131BA0A096LNP1 70 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 IGKV2D-26A0A0A0MRZ7 120 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 TRAV10A0A0B4J240 114 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 TRAV8-6A0A0B4J262 113 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 A0A1B0GUV1 79 aa4.89□□□□□ -1.63
SF3A3-206ENST00000487062 LEPROTO15243 131 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms