RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 DEFB4AO15263 64 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 PRSS1P07477 247 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 ARMS2P0C7Q2 107 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 HLA-DMBP28068 263 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
APTX-228ENST00000486724 AMTNQ6UX39 209 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 Q6ZTC4 211 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 NFE4Q86UQ8 179 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 MAP6D1Q9H9H5 199 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 DKK2Q9UBU2 259 aa6.04□□□□□ -1.44
APTX-228ENST00000486724 TRAV12-1A0A0B4J245 112 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 TRAV25A0A0B4J276 109 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 K7EQG2 157 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 ATP5G1P05496 136 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 RPL35AP18077 110 aaKnown RBP6.03□□□□□ -1.44
APTX-228ENST00000486724 CKS2P33552 79 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 PSMB2P49721 201 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 UBE2D1P51668 147 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 RPL11P62913 178 aaKnown RBP6.03□□□□□ -1.44
APTX-228ENST00000486724 GNG5P63218 68 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 MEIG1Q5JSS6 88 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 ZC2HC1BQ5TFG8 222 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 MORN3Q6PF18 240 aaPredicted RBP6.03□□□□□ -1.44
APTX-228ENST00000486724 DCANP1Q8TF63 244 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 C16orf92Q96LL3 132 aa6.03□□□□□ -1.44
APTX-228ENST00000486724 IGKV2D-26A0A0A0MRZ7 120 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 LOC389332A0A1B0GUA5 103 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 RBAKDNA6NC62 111 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
APTX-228ENST00000486724 CCDC179H3BU77 68 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 M0R3E3 92 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 MRPL51Q4U2R6 128 aaKnown RBP6.02□□□□□ -1.45
APTX-228ENST00000486724 GOLT1AQ6ZVE7 132 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 COX8CQ7Z4L0 72 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 RNF182Q8N6D2 247 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 OR13C6PQ8NH95 151 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
APTX-228ENST00000486724 CSDC2Q9Y534 153 aaKnown RBP6.02□□□□□ -1.45
APTX-228ENST00000486724 IGKV3-7A0A075B6H7 116 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 FAM240AA0A1B0GVK7 77 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 LINC01549A6NIU2 74 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 H7C1H1 209 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 RPL13AP40429 203 aaKnown RBP6.01□□□□□ -1.45
APTX-228ENST00000486724 ID1P41134 155 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 LEPP41159 167 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 SNRPD3P62318 126 aaKnown RBP6.01□□□□□ -1.45
APTX-228ENST00000486724 IGFL4Q6B9Z1 124 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 Q6ZSN1 163 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 C6orf223Q8N319 242 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 Q8N8P6 123 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 C20orf173Q96LM9 149 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 AGRNO00468 2067 aa6.01□□□□□ -1.45
APTX-228ENST00000486724 IGKV2-40A0A087WW87 121 aaPredicted RBP6□□□□□ -1.45
APTX-228ENST00000486724 DEFB131BA0A096LNP1 70 aa6□□□□□ -1.45
APTX-228ENST00000486724 TRAV8-4A0A0B4J246 113 aa6□□□□□ -1.45
APTX-228ENST00000486724 LOC107984156A0A0G2JMH3 177 aa6□□□□□ -1.45
APTX-228ENST00000486724 J3KT08 172 aa6□□□□□ -1.45
APTX-228ENST00000486724 K7EMI3 77 aa6□□□□□ -1.45
APTX-228ENST00000486724 IGKV2D-40P01614 121 aaPredicted RBP6□□□□□ -1.45
APTX-228ENST00000486724 IGLV2-11P01706 119 aa6□□□□□ -1.45
APTX-228ENST00000486724 KRTAP10-2P60368 255 aa6□□□□□ -1.45
APTX-228ENST00000486724 PAPPA-AS1Q5QFB9 102 aa6□□□□□ -1.45
APTX-228ENST00000486724 FAM159AQ6UWV7 190 aa6□□□□□ -1.45
APTX-228ENST00000486724 PRNTQ86SH4 94 aa6□□□□□ -1.45
APTX-228ENST00000486724 ARL17AQ8IVW1 177 aa6□□□□□ -1.45
APTX-228ENST00000486724 RASL10AQ92737 203 aa6□□□□□ -1.45
APTX-228ENST00000486724 TPPP3Q9BW30 176 aa6□□□□□ -1.45
APTX-228ENST00000486724 TRAV8-1A0A0A6YYK1 113 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 TRBV7-7A0A0K0K1E9 115 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 SMIM9A6NGZ8 99 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 PRAC2D3DTV9 90 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 F8VRH5 84 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 FAM229AH3BQW9 127 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 DUSP14O95147 198 aaKnown RBP5.99□□□□□ -1.45
APTX-228ENST00000486724 AMN1Q8IY45 258 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 ANKRD29Q8N6D5 301 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 Q8NAQ8 132 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 LRP2P98164 4655 aa5.99□□□□□ -1.45
APTX-228ENST00000486724 SLC25A20O43772 301 aa5.98□□□□□ -1.45
APTX-228ENST00000486724 ACYP1P07311 99 aa5.98□□□□□ -1.45
APTX-228ENST00000486724 ODF3L2Q3SX64 289 aa5.98□□□□□ -1.45
APTX-228ENST00000486724 LYZL1Q6UWQ5 148 aa5.98□□□□□ -1.45
APTX-228ENST00000486724 C9orf47Q6ZRZ4 202 aa5.98□□□□□ -1.45
APTX-228ENST00000486724 CNFNQ9BYD5 112 aa5.98□□□□□ -1.45
APTX-228ENST00000486724 LENEPQ9Y5L5 61 aa5.98□□□□□ -1.45
APTX-228ENST00000486724 NACAE9PAV3 2078 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 TRAV4A0A0B4J268 109 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 A0A0J9YX75 114 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 M0R2P5 195 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 TCL1BO95988 128 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 HERVK_113P61574 105 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
APTX-228ENST00000486724 LAGE3Q14657 143 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 C10orf126Q8N4M7 172 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 C15orf53Q8NAA6 179 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 Q8TAT8 98 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 TMEM101Q96IK0 257 aa5.97□□□□□ -1.45
APTX-228ENST00000486724 SGK494Q96LW2 274 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms