RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 Q6JHZ5 121 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 BAGE2Q86Y30 109 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 MGST2Q99735 147 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 SPANXDQ9BXN6 97 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 DYNLRB1Q9NP97 96 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 CPSF1Q10570 1443 aaKnown RBP-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 DOCK2Q92608 1830 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 PTPN13Q12923 2485 aa-0.25□□□□□ -2.45
GCFC2-209ENST00000486016 NAIPQ13075 1403 aa-0.26□□□□□ -2.45
GCFC2-209ENST00000486016 C10orf71Q711Q0 1435 aa-0.26□□□□□ -2.45
GCFC2-209ENST00000486016 IGLC7A0M8Q6 106 aa-0.26□□□□□ -2.45
GCFC2-209ENST00000486016 APOC2P02655 101 aa-0.26□□□□□ -2.45
GCFC2-209ENST00000486016 KIF21AQ7Z4S6 1674 aa-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 FXYD6-FXYD2A0A087WZ82 144 aa-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 HMGN4O00479 90 aa-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 SPRR2DP22532 72 aa-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 TPPP2P59282 170 aa-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 DCDP81605 110 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 LINC01558Q9Y6Z2 57 aa-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 MYH7P12883 1935 aa-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 NSD1Q96L73 2696 aaPredicted RBP-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 RIMS1Q86UR5 1692 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-209ENST00000486016 USF3Q68DE3 2245 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 FSIP2Q5CZC0 6907 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 SSSCA1O60232 199 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 APOC3P02656 99 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 PRM1P04553 51 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 COMMD6Q7Z4G1 85 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 C5orf38Q86SI9 138 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 C8orf59Q8N0T1 100 aaPredicted RBP-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 C1orf54Q8WWF1 131 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 LINC00474Q9P2X8 69 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 TENM4Q6N022 2769 aa-0.28□□□□□ -2.45
GCFC2-209ENST00000486016 BCL9LQ86UU0 1499 aa-0.29□□□□□ -2.46
GCFC2-209ENST00000486016 TRBV6-1A0A0K0K1D8 114 aa-0.29□□□□□ -2.46
GCFC2-209ENST00000486016 IFNGP01579 166 aa-0.29□□□□□ -2.46
GCFC2-209ENST00000486016 AKAIN1P0CW23 69 aa-0.29□□□□□ -2.46
GCFC2-209ENST00000486016 PIGYQ3MUY2 71 aa-0.29□□□□□ -2.46
GCFC2-209ENST00000486016 SBF2Q86WG5 1849 aa-0.29□□□□□ -2.46
GCFC2-209ENST00000486016 QRICH2Q9H0J4 1663 aa-0.3□□□□□ -2.46
GCFC2-209ENST00000486016 PAPPAQ13219 1627 aa-0.3□□□□□ -2.46
GCFC2-209ENST00000486016 OOSP1A8MZH6 123 aa-0.3□□□□□ -2.46
GCFC2-209ENST00000486016 MYO7BQ6PIF6 2116 aa-0.3□□□□□ -2.46
GCFC2-209ENST00000486016 PP6455Q8WZ26 134 aa-0.3□□□□□ -2.46
GCFC2-209ENST00000486016 ROCK2O75116 1388 aaKnown RBP-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 VWFP04275 2813 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 CSMD3Q7Z407 3707 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 LOC285095A0A1B0GVY8 99 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 SFT2D2O95562 160 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 TNFP01375 233 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 MRPL54Q6P161 138 aaKnown RBP-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 MYOZ3Q8TDC0 251 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 A2ML1A8K2U0 1454 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 ROBO1Q9Y6N7 1651 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 CHD6Q8TD26 2715 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 MYCBP2O75592 4640 aa-0.31□□□□□ -2.46
GCFC2-209ENST00000486016 KTN1Q86UP2 1357 aaKnown RBP-0.32□□□□□ -2.46
GCFC2-209ENST00000486016 SPTBN1Q01082 2364 aaKnown RBP-0.32□□□□□ -2.46
GCFC2-209ENST00000486016 CHKB-CPT1BH3BT56 60 aa-0.32□□□□□ -2.46
GCFC2-209ENST00000486016 C9orf153Q5TBE3 101 aa-0.32□□□□□ -2.46
GCFC2-209ENST00000486016 PSME4Q14997 1843 aa-0.32□□□□□ -2.46
GCFC2-209ENST00000486016 SHROOM2Q13796 1616 aa-0.32□□□□□ -2.46
GCFC2-209ENST00000486016 MYOM1P52179 1685 aa-0.33□□□□□ -2.46
GCFC2-209ENST00000486016 SHANK2Q9UPX8 1470 aa-0.33□□□□□ -2.46
GCFC2-209ENST00000486016 PKD1L1Q8TDX9 2849 aa-0.33□□□□□ -2.46
GCFC2-209ENST00000486016 KRTAP6-1Q3LI64 71 aa-0.33□□□□□ -2.46
GCFC2-209ENST00000486016 CDC42SE2Q9NRR3 84 aa-0.33□□□□□ -2.46
GCFC2-209ENST00000486016 NSD3Q9BZ95 1437 aa-0.33□□□□□ -2.46
GCFC2-209ENST00000486016 HSPG2P98160 4391 aa-0.33□□□□□ -2.46
GCFC2-209ENST00000486016 RAPGEF6Q8TEU7 1601 aa-0.34□□□□□ -2.46
GCFC2-209ENST00000486016 UBE2L5PA0A1B0GUS4 154 aa-0.34□□□□□ -2.46
GCFC2-209ENST00000486016 MGPP08493 103 aa-0.34□□□□□ -2.46
GCFC2-209ENST00000486016 COX6B1P14854 86 aa-0.34□□□□□ -2.46
GCFC2-209ENST00000486016 UBE2L3P68036 154 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-209ENST00000486016 RPL13AP3Q6NVV1 102 aa-0.34□□□□□ -2.46
GCFC2-209ENST00000486016 WDR7Q9Y4E6 1490 aa-0.35□□□□□ -2.46
GCFC2-209ENST00000486016 ARHGEF5Q12774 1597 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 SMG6Q86US8 1419 aaKnown RBP-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 K7EQZ3 153 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 SNAPC5O75971 98 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 IGLC1P0CG04 106 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 SPRR1BP22528 89 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 DEFB123Q8N688 67 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 TMEM263Q8WUH6 116 aaKnown RBP-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 SPRR4Q96PI1 79 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 NXT2Q9NPJ8 142 aaKnown RBP-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 FAIMQ9NVQ4 179 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 UQCR10Q9UDW1 63 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 ARHGEF12Q9NZN5 1544 aa-0.35□□□□□ -2.47
GCFC2-209ENST00000486016 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.36□□□□□ -2.47
GCFC2-209ENST00000486016 FAM223AQ8IWN6 122 aa-0.36□□□□□ -2.47
GCFC2-209ENST00000486016 DPH3P1Q9H4G8 78 aa-0.36□□□□□ -2.47
GCFC2-209ENST00000486016 STAB1Q9NY15 2570 aa-0.36□□□□□ -2.47
GCFC2-209ENST00000486016 CSPG4Q6UVK1 2322 aa-0.36□□□□□ -2.47
GCFC2-209ENST00000486016 LRP2P98164 4655 aa-0.36□□□□□ -2.47
GCFC2-209ENST00000486016 GVINP1Q7Z2Y8 2422 aa-0.36□□□□□ -2.47
GCFC2-209ENST00000486016 POLA1P09884 1462 aaPredicted RBP-0.36□□□□□ -2.47
GCFC2-209ENST00000486016 KDM5AP29375 1690 aaKnown RBP-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 CUL7Q14999 1698 aa-0.37□□□□□ -2.47
GCFC2-209ENST00000486016 GOLGA4Q13439 2230 aaKnown RBP-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms