RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 PRR34Q9NV39 138 aa6.26□□□□□ -1.41
SHROOM3-207ENST00000485780 SMIM6P0DI80 62 aa6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 ZNF25P17030 456 aaPredicted RBP6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 FCER1GP30273 86 aa6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 TNP2Q05952 138 aa6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 GAGE6Q13070 117 aa6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 Q8N976 141 aa6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 C20orf203Q8NBC4 194 aa6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 CSDC2Q9Y534 153 aaKnown RBP6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 KIAA1109Q2LD37 5005 aa6.25□□□□□ -1.41
SHROOM3-207ENST00000485780 LRP1BQ9NZR2 4599 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 IGLV4-60A0A075B6I1 120 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 IGKV2-29A2NJV5 120 aaPredicted RBP6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 UBE2L6O14933 153 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 FGF6P10767 208 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 Q0VG73 95 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 C12orf57Q99622 126 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 TIMM21Q9BVV7 248 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 KLK12Q9UKR0 248 aa6.24□□□□□ -1.41
SHROOM3-207ENST00000485780 TRAV8-3A0A0A6YYJ7 113 aa6.23□□□□□ -1.41
SHROOM3-207ENST00000485780 C16orf90A8MZG2 172 aa6.23□□□□□ -1.41
SHROOM3-207ENST00000485780 TMEM262E9PQX1 116 aa6.23□□□□□ -1.41
SHROOM3-207ENST00000485780 ENHOQ6UWT2 76 aa6.23□□□□□ -1.41
SHROOM3-207ENST00000485780 C18orf32Q8TCD1 76 aa6.23□□□□□ -1.41
SHROOM3-207ENST00000485780 HIST1H2BLQ99880 126 aa6.23□□□□□ -1.41
SHROOM3-207ENST00000485780 UBE2D4Q9Y2X8 147 aa6.23□□□□□ -1.41
SHROOM3-207ENST00000485780 LOC389332A0A1B0GUA5 103 aa6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 A6NJY4 79 aa6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 ANGP03950 147 aaKnown RBP6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 IFI27P40305 119 aaPredicted RBP6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 MIAQ16674 131 aa6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 ORMDL2Q53FV1 153 aa6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 TMEM18Q96B42 140 aa6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 PACRGQ96M98 296 aaPredicted RBP6.22□□□□□ -1.41
SHROOM3-207ENST00000485780 HSPG2P98160 4391 aa6.21□□□□□ -1.41
SHROOM3-207ENST00000485780 S100A2P29034 98 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 RPL39P62891 51 aaKnown RBP6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 SMAGPQ0VAQ4 97 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 AMMECR1LQ6DCA0 310 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 OR10D4PQ8NGN7 298 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 UBE2WQ96B02 151 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 URB1-AS1Q96HZ7 61 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 CDC42SE2Q9NRR3 84 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 SPANXA1Q9NS26 97 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 RYR1P21817 5038 aa6.21□□□□□ -1.42
SHROOM3-207ENST00000485780 NUPR1O60356 82 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 CRPP02741 224 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 NPSP0C0P6 89 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 LINC00310P59036 64 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 S100A12P80511 92 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 MRPS36P82909 103 aaKnown RBP6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 REG3AQ06141 175 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 PYY3Q5JQD4 70 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 RNASEKQ6P5S7 137 aaKnown RBP6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 KRTAP26-1Q6PEX3 210 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 C2orf66Q6UXQ4 117 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 RMI2Q96E14 147 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 COX11Q9Y6N1 276 aa6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
SHROOM3-207ENST00000485780 TRAV8-4A0A0B4J246 113 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 LINC01549A6NIU2 74 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 EREGO14944 169 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 FABP4P15090 132 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 G0S2P27469 103 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 JOSD1Q15040 202 aaPredicted RBP6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 SPATA12Q7Z6I5 190 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 ZNF664Q8N3J9 261 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 TMEM101Q96IK0 257 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 TM2D2Q9BX73 214 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 Q9HAA7 133 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 AP5S1Q9NUS5 200 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 CYSLTR1Q9Y271 337 aa6.19□□□□□ -1.42
SHROOM3-207ENST00000485780 A0A096LNJ9 63 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 LRCOL1A6NCL2 159 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 IGIPA6NJ69 53 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 LINC00614P0C842 121 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 PDZD11Q5EBL8 140 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 CLPSL2Q6UWE3 100 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 Q6ZUT4 128 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 FA2HQ7L5A8 372 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 MAPKAPK5-AS1Q8N8E1 139 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 TOMM6Q96B49 74 aa6.18□□□□□ -1.42
SHROOM3-207ENST00000485780 IGLV4-3A0A075B6K6 122 aa6.17□□□□□ -1.42
SHROOM3-207ENST00000485780 CCL25O15444 150 aa6.17□□□□□ -1.42
SHROOM3-207ENST00000485780 CHCHD1Q96BP2 118 aaKnown RBP6.17□□□□□ -1.42
SHROOM3-207ENST00000485780 TIMM17AQ99595 171 aa6.17□□□□□ -1.42
SHROOM3-207ENST00000485780 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
SHROOM3-207ENST00000485780 IGKV2D-24A0A075B6R9 120 aa6.16□□□□□ -1.42
SHROOM3-207ENST00000485780 A0A087WTM6 91 aa6.16□□□□□ -1.42
SHROOM3-207ENST00000485780 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
SHROOM3-207ENST00000485780 DGAT2L7PQ6IED9 249 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms