RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 VAMP8Q9BV40 100 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 SNHG12Q9BXW3 62 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 CDC42SE2Q9NRR3 84 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 LINC01558Q9Y6Z2 57 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 ABCC10Q5T3U5 1492 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 ZNF469Q96JG9 3925 aaPredicted RBP0.92□□□□□ -2.26
VPS13A-211ENST00000484581 TET3O43151 1660 aa0.91□□□□□ -2.26
VPS13A-211ENST00000484581 FAM213BQ8TBF2 198 aa0.91□□□□□ -2.26
VPS13A-211ENST00000484581 MANBALQ9NQG1 85 aa0.91□□□□□ -2.26
VPS13A-211ENST00000484581 PLXNB2O15031 1838 aa0.91□□□□□ -2.26
VPS13A-211ENST00000484581 ASXL3Q9C0F0 2248 aa0.91□□□□□ -2.26
VPS13A-211ENST00000484581 VPS8Q8N3P4 1428 aa0.9□□□□□ -2.26
VPS13A-211ENST00000484581 WNK3Q9BYP7 1800 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 TRAV22A0A0B4J277 110 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 APOC3P02656 99 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 MT-ATP8P03928 68 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 KRTDAPP60985 99 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 Q0VG73 95 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 SFTA2Q6UW10 78 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 UBE2DNLQ8IWF7 75 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 PMCHL2Q9BQD1 86 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 NPVFQ9HCQ7 196 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 MYOM1P52179 1685 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.27
VPS13A-211ENST00000484581 KIF21AQ7Z4S6 1674 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 LINC00032P0C843 101 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 SEC11AP67812 179 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 COX17Q14061 63 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 DPY30Q9C005 99 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 MEGF8Q7Z7M0 2845 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 SBF2Q86WG5 1849 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 ABCA3Q99758 1704 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 CC2D2AQ9P2K1 1620 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 ZNF609O15014 1411 aa0.89□□□□□ -2.27
VPS13A-211ENST00000484581 hADV29S1A0JD25 119 aa0.88□□□□□ -2.27
VPS13A-211ENST00000484581 SFT2D2O95562 160 aa0.88□□□□□ -2.27
VPS13A-211ENST00000484581 FAUP35544 74 aaKnown RBP0.88□□□□□ -2.27
VPS13A-211ENST00000484581 UBE2D3P61077 147 aa0.88□□□□□ -2.27
VPS13A-211ENST00000484581 UBE2D2P62837 147 aa0.88□□□□□ -2.27
VPS13A-211ENST00000484581 PRO1933Q9H354 126 aa0.88□□□□□ -2.27
VPS13A-211ENST00000484581 V9GYS6 101 aa0.88□□□□□ -2.27
VPS13A-211ENST00000484581 CACNA1HO95180 2353 aa0.88□□□□□ -2.27
VPS13A-211ENST00000484581 PLEKHH2Q8IVE3 1493 aa0.87□□□□□ -2.27
VPS13A-211ENST00000484581 LRRC37A2A6NM11 1700 aa0.87□□□□□ -2.27
VPS13A-211ENST00000484581 LINC00472Q9H8W2 130 aa0.87□□□□□ -2.27
VPS13A-211ENST00000484581 NXT2Q9NPJ8 142 aaKnown RBP0.87□□□□□ -2.27
VPS13A-211ENST00000484581 PRO1854Q9UHT4 67 aa0.87□□□□□ -2.27
VPS13A-211ENST00000484581 ABCC5O15440 1437 aa0.87□□□□□ -2.27
VPS13A-211ENST00000484581 NSD3Q9BZ95 1437 aa0.87□□□□□ -2.27
VPS13A-211ENST00000484581 UNC13BO14795 1591 aa0.87□□□□□ -2.27
VPS13A-211ENST00000484581 BAZ1AQ9NRL2 1556 aaPredicted RBP0.87□□□□□ -2.27
VPS13A-211ENST00000484581 CACNA1CQ13936 2221 aa0.87□□□□□ -2.27
VPS13A-211ENST00000484581 RAPGEF2Q9Y4G8 1499 aa0.86□□□□□ -2.27
VPS13A-211ENST00000484581 KDM3BQ7LBC6 1761 aa0.86□□□□□ -2.27
VPS13A-211ENST00000484581 COX6CP09669 75 aa0.86□□□□□ -2.27
VPS13A-211ENST00000484581 TRAPPC2P0DI81 140 aa0.86□□□□□ -2.27
VPS13A-211ENST00000484581 TRAPPC2BP0DI82 140 aa0.86□□□□□ -2.27
VPS13A-211ENST00000484581 C9orf62Q8N4C0 152 aa0.86□□□□□ -2.27
VPS13A-211ENST00000484581 FAIMQ9NVQ4 179 aa0.86□□□□□ -2.27
VPS13A-211ENST00000484581 FYCO1Q9BQS8 1478 aa0.86□□□□□ -2.27
VPS13A-211ENST00000484581 ANKRD36BQ8N2N9 1353 aa0.85□□□□□ -2.27
VPS13A-211ENST00000484581 A0A0G2JND7 137 aa0.85□□□□□ -2.27
VPS13A-211ENST00000484581 COX6A2Q02221 97 aa0.85□□□□□ -2.27
VPS13A-211ENST00000484581 SSBP3-AS1Q7Z2R9 100 aa0.85□□□□□ -2.27
VPS13A-211ENST00000484581 APCP25054 2843 aa0.85□□□□□ -2.27
VPS13A-211ENST00000484581 AHCTF1Q8WYP5 2266 aa0.85□□□□□ -2.27
VPS13A-211ENST00000484581 HMGXB3Q12766 1538 aa0.84□□□□□ -2.27
VPS13A-211ENST00000484581 KCPQ6ZWJ8 1503 aa0.84□□□□□ -2.27
VPS13A-211ENST00000484581 CHD1O14646 1710 aa0.84□□□□□ -2.27
VPS13A-211ENST00000484581 UQCRHLA0A096LP55 91 aa0.84□□□□□ -2.27
VPS13A-211ENST00000484581 PVALEFA0A1B0GWK0 134 aa0.84□□□□□ -2.27
VPS13A-211ENST00000484581 ZNF815PA8K554 130 aa0.84□□□□□ -2.27
VPS13A-211ENST00000484581 ATOX1O00244 68 aa0.84□□□□□ -2.27
VPS13A-211ENST00000484581 ARL2-SNX15V9GYD0 113 aa0.84□□□□□ -2.27
VPS13A-211ENST00000484581 TOPAZ1Q8N9V7 1692 aa0.84□□□□□ -2.28
VPS13A-211ENST00000484581 ARHGEF5Q12774 1597 aa0.83□□□□□ -2.28
VPS13A-211ENST00000484581 TTC37Q6PGP7 1564 aa0.83□□□□□ -2.28
VPS13A-211ENST00000484581 UNC79Q9P2D8 2635 aa0.83□□□□□ -2.28
VPS13A-211ENST00000484581 IGLC1P0CG04 106 aa0.83□□□□□ -2.28
VPS13A-211ENST00000484581 ASIPP42127 132 aa0.83□□□□□ -2.28
VPS13A-211ENST00000484581 TEX14Q8IWB6 1497 aa0.83□□□□□ -2.28
VPS13A-211ENST00000484581 SHANK2Q9UPX8 1470 aa0.83□□□□□ -2.28
VPS13A-211ENST00000484581 KDM5AP29375 1690 aaKnown RBP0.83□□□□□ -2.28
VPS13A-211ENST00000484581 TNCP24821 2201 aa0.83□□□□□ -2.28
VPS13A-211ENST00000484581 RAPGEF6Q8TEU7 1601 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 CACNA1EQ15878 2313 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 CYB5AP00167 134 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 UQCRHP07919 91 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 MGPP08493 103 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 HAMPP81172 84 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 PEA15Q15121 130 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 FAM223AQ8IWN6 122 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 CACFD1Q9UGQ2 172 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 RB1CC1Q8TDY2 1594 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 BTAF1O14981 1849 aa0.82□□□□□ -2.28
VPS13A-211ENST00000484581 CCDC18Q5T9S5 1454 aa0.81□□□□□ -2.28
VPS13A-211ENST00000484581 MAGI1Q96QZ7 1491 aaPredicted RBP0.81□□□□□ -2.28
VPS13A-211ENST00000484581 EHBP1L1Q8N3D4 1523 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms