RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 LINC00310P59036 64 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 ESRGQ1W209 222 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 MRPL52Q86TS9 123 aaKnown RBP4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 HIST3H2BBQ8N257 126 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 FAM19A2Q8N3H0 131 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 SCGB3A1Q96QR1 104 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 MRPS16Q9Y3D3 137 aaKnown RBP4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 CSMD3Q7Z407 3707 aa4.48□□□□□ -1.69
PDZRN3-209ENST00000484487 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 A0A1B0GUV1 79 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 IGKV2-29A2NJV5 120 aaPredicted RBP4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 FGF6P10767 208 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 FABP4P15090 132 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 RPL39P62891 51 aaKnown RBP4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 GAGE6Q13070 117 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 PMCHL1Q16048 86 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 ZFAND6Q6FIF0 208 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 Q6ZN92 141 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 UBE2DNLQ8IWF7 75 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 OR5A1Q8NGJ0 315 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 DEFB104AQ8WTQ1 72 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 UPK3BQ9BT76 320 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 MAP1LC3CQ9BXW4 147 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 UBE2D4Q9Y2X8 147 aa4.47□□□□□ -1.69
PDZRN3-209ENST00000484487 TRAV9-2A0A087WT02 112 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 A0A096LNJ9 63 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 IGIPA6NJ69 53 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 K7EP13 123 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 PRSS1P07477 247 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 AKR1D1P51857 326 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 MRPS36P82909 103 aaKnown RBP4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 IFI27L1Q96BM0 104 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 HIST1H2BLQ99880 126 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 C2orf88Q9BSF0 95 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 VCX2Q9H322 139 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 LINC00588Q9Y4M8 146 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 STARD9Q9P2P6 4700 aa4.46□□□□□ -1.7
PDZRN3-209ENST00000484487 VPS13DQ5THJ4 4388 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 SIVA1O15304 175 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 CCL25O15444 150 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 DNAH10OSP0CZ25 163 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 RBX1P62877 108 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 PMVKQ15126 192 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 LINC01556Q5JQF7 62 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 CASC10Q5T4H9 136 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 TEX43Q6ZNM6 134 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 ZNF664Q8N3J9 261 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 CDC42SE2Q9NRR3 84 aa4.45□□□□□ -1.7
PDZRN3-209ENST00000484487 IGLV4-3A0A075B6K6 122 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 TRAV12-1A0A0B4J245 112 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 C20orf202A1L168 122 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 ANGP03950 147 aaKnown RBP4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 SEC11AP67812 179 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 MPV17L2Q567V2 206 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 LGALS9CQ6DKI2 356 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 PET117Q6UWS5 81 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 SPATA12Q7Z6I5 190 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 WFDC10BQ8IUB3 73 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 C10orf126Q8N4M7 172 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 Q9H8V8 135 aa4.44□□□□□ -1.7
PDZRN3-209ENST00000484487 SYS1-DBNDD2H3BUS1 97 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 IGHV3-30P01768 117 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 IGHV3-33P01772 117 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 CRPP02741 224 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 IGHV3-30-3P0DP02 117 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 IGHV3-30-5P0DP03 117 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 KRTDAPP60985 99 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 SS18Q15532 418 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 TTC32Q5I0X7 151 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 Q8N976 141 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 OR10D4PQ8NGN7 298 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 BAALCQ8WXS3 180 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 AMELXQ99217 191 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 CST9LQ9H4G1 147 aa4.43□□□□□ -1.7
PDZRN3-209ENST00000484487 IGLV4-60A0A075B6I1 120 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 TRAV8-4A0A0B4J246 113 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 PRSS29PA6NIE9 313 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 IFITM10A6NMD0 228 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 H0Y8G0 127 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 C3orf79P0CE67 100 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 REG3AQ06141 175 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 MIAQ16674 131 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 Q6ZUT4 128 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 LINC00173Q6ZV60 143 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 LINC00269Q8N2A0 174 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 RMI2Q96E14 147 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 KLK12Q9UKR0 248 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 CHTOPQ9Y3Y2 248 aaKnown RBP4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 ALMS1Q8TCU4 4167 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 DNAH1Q9P2D7 4330 aa4.42□□□□□ -1.7
PDZRN3-209ENST00000484487 TRAV8-3A0A0A6YYJ7 113 aa4.41□□□□□ -1.7
PDZRN3-209ENST00000484487 IBA57-AS1B1ANH7 110 aa4.41□□□□□ -1.7
PDZRN3-209ENST00000484487 F8VRH5 84 aa4.41□□□□□ -1.7
PDZRN3-209ENST00000484487 SCGB1D1O95968 90 aa4.41□□□□□ -1.7
PDZRN3-209ENST00000484487 PLNP26678 52 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms