RNA–Protein interactions for RNA: ENST00000484454.1

TARBP1-208, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

TSL 2

Gene TARBP1, Length 426 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-208ENST00000484454 STAB1Q9NY15 2570 aa-0.27□□□□□ -2.45
TARBP1-208ENST00000484454 LRRC37A2A6NM11 1700 aa-0.27□□□□□ -2.45
TARBP1-208ENST00000484454 PPRC1Q5VV67 1664 aaKnown RBP-0.27□□□□□ -2.45
TARBP1-208ENST00000484454 USF3Q68DE3 2245 aa-0.28□□□□□ -2.45
TARBP1-208ENST00000484454 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
TARBP1-208ENST00000484454 SRRM2Q9UQ35 2752 aaKnown RBP-0.28□□□□□ -2.45
TARBP1-208ENST00000484454 K7EP13 123 aa-0.28□□□□□ -2.45
TARBP1-208ENST00000484454 HMGN1P05114 100 aa-0.28□□□□□ -2.45
TARBP1-208ENST00000484454 Q56UQ5 140 aa-0.28□□□□□ -2.45
TARBP1-208ENST00000484454 TMEM170BQ5T4T1 132 aa-0.28□□□□□ -2.45
TARBP1-208ENST00000484454 NDUFA4L2Q9NRX3 87 aa-0.28□□□□□ -2.45
TARBP1-208ENST00000484454 TNXBP22105 4242 aa-0.29□□□□□ -2.46
TARBP1-208ENST00000484454 FAT1Q14517 4588 aa-0.29□□□□□ -2.46
TARBP1-208ENST00000484454 CATR1Q13166 79 aa-0.29□□□□□ -2.46
TARBP1-208ENST00000484454 PPP3R2Q96LZ3 170 aa-0.29□□□□□ -2.46
TARBP1-208ENST00000484454 LRP2P98164 4655 aa-0.29□□□□□ -2.46
TARBP1-208ENST00000484454 MYCBP2O75592 4640 aa-0.29□□□□□ -2.46
TARBP1-208ENST00000484454 HSPG2P98160 4391 aa-0.29□□□□□ -2.46
TARBP1-208ENST00000484454 SPTBN1Q01082 2364 aaKnown RBP-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 HERC2O95714 4834 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 KIF21AQ7Z4S6 1674 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 RYR3Q15413 4870 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 S100A3P33764 101 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 BTG2P78543 158 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 Q5VSD8 79 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 BAGE2Q86Y30 109 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 LINC00472Q9H8W2 130 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 TP53AIP1Q9HCN2 124 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 FLNAP21333 2647 aaKnown RBP-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 PIEZO2Q9H5I5 2752 aa-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 CPSF1Q10570 1443 aaKnown RBP-0.3□□□□□ -2.46
TARBP1-208ENST00000484454 PSME4Q14997 1843 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 SBF2Q86WG5 1849 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 HERC1Q15751 4861 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 TRBV7-3A0A075B6L6 115 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 F8VRH5 84 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 COX17Q14061 63 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 KRTAP19-7Q3SYF9 63 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 Q6JHZ5 121 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 MGST2Q99735 147 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 DCHS2Q6V1P9 2916 aa-0.31□□□□□ -2.46
TARBP1-208ENST00000484454 PDZD2O15018 2839 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 MYO7BQ6PIF6 2116 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 FXYD6-FXYD2A0A087WZ82 144 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 APOC2P02655 101 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 SPRR1AP35321 89 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 SPANXDQ9BXN6 97 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 DYNLRB1Q9NP97 96 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 GVINP1Q7Z2Y8 2422 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 NAIPQ13075 1403 aa-0.32□□□□□ -2.46
TARBP1-208ENST00000484454 NF1P21359 2839 aa-0.33□□□□□ -2.46
TARBP1-208ENST00000484454 IGLC7A0M8Q6 106 aa-0.33□□□□□ -2.46
TARBP1-208ENST00000484454 I3L2K1 104 aa-0.33□□□□□ -2.46
TARBP1-208ENST00000484454 UQCR11O14957 56 aa-0.33□□□□□ -2.46
TARBP1-208ENST00000484454 FGF7P21781 194 aa-0.33□□□□□ -2.46
TARBP1-208ENST00000484454 C10orf71Q711Q0 1435 aa-0.33□□□□□ -2.46
TARBP1-208ENST00000484454 HIVEP1P15822 2718 aa-0.33□□□□□ -2.46
TARBP1-208ENST00000484454 RIMS1Q86UR5 1692 aaKnown RBP-0.33□□□□□ -2.46
TARBP1-208ENST00000484454 HYDINQ4G0P3 5121 aa-0.34□□□□□ -2.46
TARBP1-208ENST00000484454 HMGN4O00479 90 aa-0.34□□□□□ -2.46
TARBP1-208ENST00000484454 KRTAP20-2Q3LI61 65 aa-0.34□□□□□ -2.46
TARBP1-208ENST00000484454 LPAP08519 4548 aa-0.34□□□□□ -2.46
TARBP1-208ENST00000484454 RYR1P21817 5038 aa-0.35□□□□□ -2.46
TARBP1-208ENST00000484454 DOPEY1Q5JWR5 2465 aa-0.35□□□□□ -2.46
TARBP1-208ENST00000484454 AKAIN1P0CW23 69 aa-0.35□□□□□ -2.47
TARBP1-208ENST00000484454 C8orf59Q8N0T1 100 aaPredicted RBP-0.35□□□□□ -2.47
TARBP1-208ENST00000484454 LINC00474Q9P2X8 69 aa-0.35□□□□□ -2.47
TARBP1-208ENST00000484454 ROBO1Q9Y6N7 1651 aa-0.35□□□□□ -2.47
TARBP1-208ENST00000484454 CREBBPQ92793 2442 aa-0.35□□□□□ -2.47
TARBP1-208ENST00000484454 UBR4Q5T4S7 5183 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 OOSP1A8MZH6 123 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 IFNGP01579 166 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 APOC3P02656 99 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 DCDP81605 110 aaKnown RBP-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 COMMD6Q7Z4G1 85 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 C5orf38Q86SI9 138 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 LINC01558Q9Y6Z2 57 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 KIAA1109Q2LD37 5005 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 ROCK2O75116 1388 aaKnown RBP-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 FAT2Q9NYQ8 4349 aa-0.36□□□□□ -2.47
TARBP1-208ENST00000484454 QRICH2Q9H0J4 1663 aa-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 USH2AO75445 5202 aa-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 SETXQ7Z333 2677 aaKnown RBP-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 TRBV6-1A0A0K0K1D8 114 aa-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 TPPP2P59282 170 aa-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 KRTAP19-8Q3LI54 63 aa-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 C1orf54Q8WWF1 131 aa-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 MAP1AP78559 2803 aaPredicted RBP-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 ATRQ13535 2644 aa-0.37□□□□□ -2.47
TARBP1-208ENST00000484454 PAPPAQ13219 1627 aa-0.38□□□□□ -2.47
TARBP1-208ENST00000484454 SSSCA1O60232 199 aa-0.38□□□□□ -2.47
TARBP1-208ENST00000484454 PRM1P04553 51 aa-0.38□□□□□ -2.47
TARBP1-208ENST00000484454 PP6455Q8WZ26 134 aa-0.38□□□□□ -2.47
TARBP1-208ENST00000484454 BSNQ9UPA5 3926 aa-0.38□□□□□ -2.47
TARBP1-208ENST00000484454 STARD9Q9P2P6 4700 aa-0.39□□□□□ -2.47
TARBP1-208ENST00000484454 TENM2Q9NT68 2774 aa-0.39□□□□□ -2.47
TARBP1-208ENST00000484454 EPPK1P58107 5090 aaKnown RBP-0.39□□□□□ -2.47
TARBP1-208ENST00000484454 MRPL54Q6P161 138 aaKnown RBP-0.39□□□□□ -2.47
TARBP1-208ENST00000484454 NBEAL1Q6ZS30 2694 aa-0.39□□□□□ -2.47
TARBP1-208ENST00000484454 BTAF1O14981 1849 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms