RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
SSBP1-211ENST00000484178 ZGRF1Q86YA3 2104 aa3.42□□□□□ -1.86
SSBP1-211ENST00000484178 C10orf105Q8TEF2 133 aa3.42□□□□□ -1.86
SSBP1-211ENST00000484178 UBE2E2Q96LR5 201 aa3.42□□□□□ -1.86
SSBP1-211ENST00000484178 DUX3Q96PT4 197 aa3.42□□□□□ -1.86
SSBP1-211ENST00000484178 TRAV13-2A0A0B4J235 113 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 A0A0J9YXV3 536 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 H0YGX0 51 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 H3BUX3 64 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 COX7A2LO14548 114 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 IGHV3-53P01767 116 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
SSBP1-211ENST00000484178 FAM74A4Q5TZK3 123 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 DAZ4Q86SG3 579 aaKnown RBP3.41□□□□□ -1.86
SSBP1-211ENST00000484178 LITAFQ99732 161 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
SSBP1-211ENST00000484178 OTOGLQ3ZCN5 2332 aa3.41□□□□□ -1.86
SSBP1-211ENST00000484178 CFAP54Q96N23 3096 aa3.4□□□□□ -1.86
SSBP1-211ENST00000484178 H3BQ85 93 aa3.4□□□□□ -1.87
SSBP1-211ENST00000484178 LY6HO94772 140 aa3.4□□□□□ -1.87
SSBP1-211ENST00000484178 INSP01308 110 aa3.4□□□□□ -1.87
SSBP1-211ENST00000484178 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
SSBP1-211ENST00000484178 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.87
SSBP1-211ENST00000484178 ANKHD1Q8IWZ3 2542 aaKnown RBP3.4□□□□□ -1.87
SSBP1-211ENST00000484178 PLXNB1O43157 2135 aa3.4□□□□□ -1.87
SSBP1-211ENST00000484178 URB1O60287 2271 aaKnown RBP3.39□□□□□ -1.87
SSBP1-211ENST00000484178 A0A1B0GX51 115 aa3.39□□□□□ -1.87
SSBP1-211ENST00000484178 F6UB75 175 aa3.39□□□□□ -1.87
SSBP1-211ENST00000484178 TRBV12-3P01733 135 aa3.39□□□□□ -1.87
SSBP1-211ENST00000484178 IGHV3-11P01762 117 aa3.39□□□□□ -1.87
SSBP1-211ENST00000484178 SDIM1Q6ZPB5 146 aa3.39□□□□□ -1.87
SSBP1-211ENST00000484178 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
SSBP1-211ENST00000484178 CCL19Q99731 98 aa3.39□□□□□ -1.87
SSBP1-211ENST00000484178 NCOR1O75376 2440 aa3.39□□□□□ -1.87
SSBP1-211ENST00000484178 UQCRQO14949 82 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 RPL28P46779 137 aaKnown RBP3.38□□□□□ -1.87
SSBP1-211ENST00000484178 EMP1P54849 157 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 LINC01547P58512 204 aaPredicted RBP3.38□□□□□ -1.87
SSBP1-211ENST00000484178 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 ATP5EP2Q5VTU8 51 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 Q6ZQT7 251 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 Q8N2B8 174 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 TMEM86BQ8N661 226 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 C11orf45Q8TAV5 145 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 LINC00308Q8TCZ7 52 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 CHCHD7Q9BUK0 85 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 VPREB3Q9UKI3 123 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 ABCA1O95477 2261 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 ZNF318Q5VUA4 2279 aa3.38□□□□□ -1.87
SSBP1-211ENST00000484178 ICE1Q9Y2F5 2266 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 FRYQ5TBA9 3013 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 PRUNE2Q8WUY3 3088 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 IGHV3OR16-12A0A075B7B8 117 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 IGHV3OR16-10A0A075B7F0 116 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 TEX49A0A1B0GTD5 131 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 H7C2G1 150 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 ATOX1O00244 68 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 BCE1O60756 84 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 DNAL4O96015 105 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 PRB4P10163 310 aaPredicted RBP3.37□□□□□ -1.87
SSBP1-211ENST00000484178 ATP5J2P56134 94 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
SSBP1-211ENST00000484178 SPINK13Q1W4C9 94 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 MEIG1Q5JSS6 88 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 JPT2Q9H910 190 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 SVILO95425 2214 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 CACNA1BQ00975 2339 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 CACNA1HO95180 2353 aa3.37□□□□□ -1.87
SSBP1-211ENST00000484178 POLEQ07864 2286 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 RBMY1BA6NDE4 496 aaKnown RBP3.36□□□□□ -1.87
SSBP1-211ENST00000484178 RBMY1EA6NEQ0 496 aaKnown RBP3.36□□□□□ -1.87
SSBP1-211ENST00000484178 IBA57-AS1B1ANH7 110 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 CRPP02741 224 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 RBMY1DP0C7P1 496 aaKnown RBP3.36□□□□□ -1.87
SSBP1-211ENST00000484178 RBMY1A1P0DJD3 496 aaKnown RBP3.36□□□□□ -1.87
SSBP1-211ENST00000484178 RBMY1CP0DJD4 496 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 BLCAPP62952 87 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 LY6EQ16553 131 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 ADAMTSL4-AS1Q5T5F5 129 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 BRD3OSQ6XYD6 125 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 C3orf22Q8N5N4 141 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 DYNLRB2Q8TF09 96 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 C4orf3Q8WVX3 66 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 LINC00526Q96FQ7 95 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 ZNF625Q96I27 306 aaPredicted RBP3.36□□□□□ -1.87
SSBP1-211ENST00000484178 LINC01587Q99440 93 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 LINC00527Q9UJ94 153 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 USP34Q70CQ2 3546 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 NBEAQ8NFP9 2946 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 BDP1A6H8Y1 2624 aa3.36□□□□□ -1.87
SSBP1-211ENST00000484178 AGRNO00468 2067 aa3.35□□□□□ -1.87
SSBP1-211ENST00000484178 RP1L1Q8IWN7 2480 aaPredicted RBP3.35□□□□□ -1.87
SSBP1-211ENST00000484178 TNRC18O15417 2968 aaPredicted RBP3.35□□□□□ -1.87
SSBP1-211ENST00000484178 PKDREJQ9NTG1 2253 aa3.35□□□□□ -1.87
SSBP1-211ENST00000484178 FRYLO94915 3013 aa3.35□□□□□ -1.87
SSBP1-211ENST00000484178 IGKV3-7A0A075B6H7 116 aa3.35□□□□□ -1.87
SSBP1-211ENST00000484178 TRAV12-2A0A075B6T6 113 aa3.35□□□□□ -1.87
SSBP1-211ENST00000484178 IGHV4-30-2A0A087WSY4 118 aa3.35□□□□□ -1.87
SSBP1-211ENST00000484178 TRAV8-3A0A0A6YYJ7 113 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms