RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 TRAV9-2A0A087WT02 112 aa11.19□□□□□ -0.62
RFTN1-209ENST00000483671 DPM2O94777 84 aa11.19□□□□□ -0.62
RFTN1-209ENST00000483671 PLNP26678 52 aa11.19□□□□□ -0.62
RFTN1-209ENST00000483671 C15orf53Q8NAA6 179 aa11.19□□□□□ -0.62
RFTN1-209ENST00000483671 PMCHL2Q9BQD1 86 aa11.19□□□□□ -0.62
RFTN1-209ENST00000483671 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
RFTN1-209ENST00000483671 MRPL35Q9NZE8 188 aaKnown RBP11.19□□□□□ -0.62
RFTN1-209ENST00000483671 CHTOPQ9Y3Y2 248 aaKnown RBP11.19□□□□□ -0.62
RFTN1-209ENST00000483671 A0A1B0GUV1 79 aa11.18□□□□□ -0.62
RFTN1-209ENST00000483671 PKIAP61925 76 aa11.18□□□□□ -0.62
RFTN1-209ENST00000483671 DGAT2L7PQ6IED9 249 aa11.18□□□□□ -0.62
RFTN1-209ENST00000483671 LYPD5Q6UWN5 251 aa11.18□□□□□ -0.62
RFTN1-209ENST00000483671 Q6ZUT4 128 aa11.18□□□□□ -0.62
RFTN1-209ENST00000483671 OR5A1Q8NGJ0 315 aa11.18□□□□□ -0.62
RFTN1-209ENST00000483671 VAMP8Q9BV40 100 aa11.18□□□□□ -0.62
RFTN1-209ENST00000483671 CDC42SE2Q9NRR3 84 aa11.18□□□□□ -0.62
RFTN1-209ENST00000483671 IGKCP01834 107 aa11.17□□□□□ -0.62
RFTN1-209ENST00000483671 AMMECR1LQ6DCA0 310 aa11.17□□□□□ -0.62
RFTN1-209ENST00000483671 TMEM101Q96IK0 257 aa11.17□□□□□ -0.62
RFTN1-209ENST00000483671 IGLV4-69A0A075B6H9 119 aa11.16□□□□□ -0.62
RFTN1-209ENST00000483671 GAGE6Q13070 117 aa11.16□□□□□ -0.62
RFTN1-209ENST00000483671 ATOH7Q8N100 152 aa11.16□□□□□ -0.62
RFTN1-209ENST00000483671 ZNF664Q8N3J9 261 aa11.16□□□□□ -0.62
RFTN1-209ENST00000483671 IGLC3P0DOY3 106 aa11.15□□□□□ -0.62
RFTN1-209ENST00000483671 ZC2HC1BQ5TFG8 222 aa11.15□□□□□ -0.62
RFTN1-209ENST00000483671 NFE4Q86UQ8 179 aa11.15□□□□□ -0.62
RFTN1-209ENST00000483671 C2orf88Q9BSF0 95 aa11.15□□□□□ -0.62
RFTN1-209ENST00000483671 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
RFTN1-209ENST00000483671 HSBP1L1C9JCN9 74 aa11.13□□□□□ -0.63
RFTN1-209ENST00000483671 RBX1P62877 108 aa11.13□□□□□ -0.63
RFTN1-209ENST00000483671 UBE2D1P51668 147 aa11.12□□□□□ -0.63
RFTN1-209ENST00000483671 PAM16Q9Y3D7 125 aa11.12□□□□□ -0.63
RFTN1-209ENST00000483671 IGLV4-60A0A075B6I1 120 aa11.11□□□□□ -0.63
RFTN1-209ENST00000483671 TRAV8-6A0A0B4J262 113 aa11.11□□□□□ -0.63
RFTN1-209ENST00000483671 hDV102S1A0JD36 115 aa11.11□□□□□ -0.63
RFTN1-209ENST00000483671 C11orf86A6NJI1 115 aa11.11□□□□□ -0.63
RFTN1-209ENST00000483671 ESRGQ1W209 222 aa11.11□□□□□ -0.63
RFTN1-209ENST00000483671 MAJINQ3KP22 176 aa11.11□□□□□ -0.63
RFTN1-209ENST00000483671 SPATA45Q537H7 98 aa11.11□□□□□ -0.63
RFTN1-209ENST00000483671 MPV17L2Q567V2 206 aa11.11□□□□□ -0.63
RFTN1-209ENST00000483671 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
RFTN1-209ENST00000483671 TINCRA0A1B0GVN0 87 aa11.1□□□□□ -0.63
RFTN1-209ENST00000483671 TMEM262E9PQX1 116 aa11.1□□□□□ -0.63
RFTN1-209ENST00000483671 A0A0J9YXV3 536 aa11.09□□□□□ -0.63
RFTN1-209ENST00000483671 SEC11AP67812 179 aa11.09□□□□□ -0.63
RFTN1-209ENST00000483671 CHAC1Q9BUX1 264 aa11.09□□□□□ -0.63
RFTN1-209ENST00000483671 IGLV5-45A0A087WSX0 123 aa11.09□□□□□ -0.63
RFTN1-209ENST00000483671 STPG4Q8N801 248 aa11.09□□□□□ -0.63
RFTN1-209ENST00000483671 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
RFTN1-209ENST00000483671 IGLL5B9A064 214 aa11.08□□□□□ -0.64
RFTN1-209ENST00000483671 CCL25O15444 150 aa11.08□□□□□ -0.64
RFTN1-209ENST00000483671 ANKRD39Q53RE8 183 aa11.08□□□□□ -0.64
RFTN1-209ENST00000483671 LINC00242Q5T6M2 205 aa11.08□□□□□ -0.64
RFTN1-209ENST00000483671 NUPR2A6NF83 97 aa11.07□□□□□ -0.64
RFTN1-209ENST00000483671 TSTD3H0UI37 97 aa11.07□□□□□ -0.64
RFTN1-209ENST00000483671 ZNF22P17026 224 aaPredicted RBP11.07□□□□□ -0.64
RFTN1-209ENST00000483671 HERVK_113P63121 156 aa11.07□□□□□ -0.64
RFTN1-209ENST00000483671 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
RFTN1-209ENST00000483671 DYNC2H1Q8NCM8 4307 aaKnown RBP11.06□□□□□ -0.64
RFTN1-209ENST00000483671 TCTAP57738 103 aa11.06□□□□□ -0.64
RFTN1-209ENST00000483671 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
RFTN1-209ENST00000483671 E9PLD3 99 aa11.05□□□□□ -0.64
RFTN1-209ENST00000483671 CCL18P55774 89 aa11.05□□□□□ -0.64
RFTN1-209ENST00000483671 LINC01556Q5JQF7 62 aa11.05□□□□□ -0.64
RFTN1-209ENST00000483671 WFDC10BQ8IUB3 73 aa11.05□□□□□ -0.64
RFTN1-209ENST00000483671 UPK3BQ9BT76 320 aa11.05□□□□□ -0.64
RFTN1-209ENST00000483671 GEMIN7Q9H840 131 aaKnown RBP11.05□□□□□ -0.64
RFTN1-209ENST00000483671 PRR34Q9NV39 138 aa11.05□□□□□ -0.64
RFTN1-209ENST00000483671 LINC00959A0A1B0GUT2 108 aa11.04□□□□□ -0.64
RFTN1-209ENST00000483671 TMEM223A0PJW6 202 aa11.04□□□□□ -0.64
RFTN1-209ENST00000483671 HERVK_113P61574 105 aa11.04□□□□□ -0.64
RFTN1-209ENST00000483671 TMEM170BQ5T4T1 132 aa11.04□□□□□ -0.64
RFTN1-209ENST00000483671 PRO1933Q9H354 126 aa11.04□□□□□ -0.64
RFTN1-209ENST00000483671 APLNQ9ULZ1 77 aa11.04□□□□□ -0.64
RFTN1-209ENST00000483671 LINC00588Q9Y4M8 146 aa11.04□□□□□ -0.64
RFTN1-209ENST00000483671 ANGP03950 147 aaKnown RBP11.03□□□□□ -0.64
RFTN1-209ENST00000483671 DNAH10OSP0CZ25 163 aa11.03□□□□□ -0.64
RFTN1-209ENST00000483671 COX8AP10176 69 aa11.03□□□□□ -0.64
RFTN1-209ENST00000483671 Q8N3U1 123 aa11.03□□□□□ -0.64
RFTN1-209ENST00000483671 KLK5Q9Y337 293 aaPredicted RBP11.03□□□□□ -0.64
RFTN1-209ENST00000483671 IGKV2D-26A0A0A0MRZ7 120 aa11.02□□□□□ -0.65
RFTN1-209ENST00000483671 DLEU1O43261 78 aa11.02□□□□□ -0.65
RFTN1-209ENST00000483671 REG3AQ06141 175 aa11.02□□□□□ -0.65
RFTN1-209ENST00000483671 LINC00269Q8N2A0 174 aa11.02□□□□□ -0.65
RFTN1-209ENST00000483671 LINC00469Q8N7U9 141 aa11.02□□□□□ -0.65
RFTN1-209ENST00000483671 MIEN1Q9BRT3 115 aa11.02□□□□□ -0.65
RFTN1-209ENST00000483671 UQCR10Q9UDW1 63 aa11.02□□□□□ -0.65
RFTN1-209ENST00000483671 DNAH7Q8WXX0 4024 aa11.01□□□□□ -0.65
RFTN1-209ENST00000483671 H3BRM9 83 aa11.01□□□□□ -0.65
RFTN1-209ENST00000483671 COX6A2Q02221 97 aa11.01□□□□□ -0.65
RFTN1-209ENST00000483671 SS18Q15532 418 aa11.01□□□□□ -0.65
RFTN1-209ENST00000483671 CDKN2A-AS1Q9UH64 79 aa11.01□□□□□ -0.65
RFTN1-209ENST00000483671 BOD1L2Q8IYS8 172 aa11□□□□□ -0.65
RFTN1-209ENST00000483671 C14orf144Q96I85 54 aa11□□□□□ -0.65
RFTN1-209ENST00000483671 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
RFTN1-209ENST00000483671 NMUP48645 174 aa10.99□□□□□ -0.65
RFTN1-209ENST00000483671 SLC25A34Q6PIV7 304 aa10.99□□□□□ -0.65
RFTN1-209ENST00000483671 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
RFTN1-209ENST00000483671 LEPROTO15243 131 aa10.98□□□□□ -0.65
RFTN1-209ENST00000483671 IGHV3-30P01768 117 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms