RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 A0A0J9YWU9 116 aa7.12□□□□□ -1.27
CDK5RAP2-216ENST00000483412 FREM1Q5H8C1 2179 aa7.12□□□□□ -1.27
CDK5RAP2-216ENST00000483412 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
CDK5RAP2-216ENST00000483412 CASC2Q6XLA1 102 aa7.12□□□□□ -1.27
CDK5RAP2-216ENST00000483412 IGKV2-24A0A0C4DH68 120 aa7.12□□□□□ -1.27
CDK5RAP2-216ENST00000483412 CCKP06307 115 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 Q8N976 141 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 A0A096LNI7 61 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 HRCT1Q6UXD1 115 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 LRP4O75096 1905 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 SHISA2Q6UWI4 295 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 TRBV6-5A0A0K0K1A5 114 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 TSHBP01222 138 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 C1orf158Q8N1D5 194 aa7.11□□□□□ -1.27
CDK5RAP2-216ENST00000483412 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.1□□□□□ -1.276e-7■■■■□ 24.9
CDK5RAP2-216ENST00000483412 PRR4Q16378 134 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 GAS8-AS1O95177 125 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 FAM19A1Q7Z5A9 133 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 CUL9Q8IWT3 2517 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 MED13LQ71F56 2210 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 A6NED7 52 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 LINC00310P59036 64 aa7.1□□□□□ -1.27
CDK5RAP2-216ENST00000483412 TRBV27A0A0K0K1C4 114 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 K7EQG2 157 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 FAM19A3Q7Z5A8 133 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 SMIM11BQ8TCY0 68 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 XAGE1AQ9HD64 81 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 ABCA1O95477 2261 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 PTPRQQ9UMZ3 2332 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 FAM222AQ5U5X8 452 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 Q6Q795 121 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 PCNX3Q9H6A9 2034 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 FAM30AQ9NZY2 134 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 PYGO1Q9Y3Y4 419 aa7.09□□□□□ -1.27
CDK5RAP2-216ENST00000483412 DSCAML1Q8TD84 2053 aa7.08□□□□□ -1.28
CDK5RAP2-216ENST00000483412 Q6JHZ5 121 aa7.08□□□□□ -1.28
CDK5RAP2-216ENST00000483412 PRR15LQ9BU68 103 aa7.08□□□□□ -1.28
CDK5RAP2-216ENST00000483412 TRBV6-8A0A0A6YYG3 113 aa7.08□□□□□ -1.28
CDK5RAP2-216ENST00000483412 LMO4P61968 165 aa7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 PRR9Q5T870 116 aa7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 RNASE3P12724 160 aaKnown RBP7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 FAM19A5Q7Z5A7 132 aaPredicted RBP7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 C11orf21Q9P2W6 132 aa7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 UBE2D4Q9Y2X8 147 aa7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 Q6ZQY7 126 aa7.07□□□□□ -1.28
CDK5RAP2-216ENST00000483412 NCOA6Q14686 2063 aaPredicted RBP7.06□□□□□ -1.28
CDK5RAP2-216ENST00000483412 URB1-AS1Q96HZ7 61 aa7.06□□□□□ -1.28
CDK5RAP2-216ENST00000483412 DOPEY2Q9Y3R5 2298 aa7.06□□□□□ -1.28
CDK5RAP2-216ENST00000483412 MED12LQ86YW9 2145 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 SMIM26A0A096LP01 95 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 CRIP2P52943 208 aaPredicted RBP7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 LY6LH3BQJ8 138 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 MIFP14174 115 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 UBE2D1P51668 147 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 KIAA1549Q9HCM3 1950 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 IGKV2-28A0A075B6P5 120 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 DNAJC9-AS1A6NH13 148 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 IGKV2D-28P01615 120 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 DEFB114Q30KQ6 69 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 POM121L12Q8N7R1 296 aa7.05□□□□□ -1.28
CDK5RAP2-216ENST00000483412 SERP1Q9Y6X1 66 aa7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 CRYGDP07320 174 aa7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 TNFRSF13BO14836 293 aaPredicted RBP7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 ANKHD1Q8IWZ3 2542 aaKnown RBP7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 LRCOL1A6NCL2 159 aa7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 K7ERS5 55 aa7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 C11orf71Q6IPW1 123 aa7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 SOSTDC1Q6X4U4 206 aa7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 CSDC2Q9Y534 153 aaKnown RBP7.04□□□□□ -1.28
CDK5RAP2-216ENST00000483412 MRPS36P82909 103 aaKnown RBP7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 TRBV6-4A0A1B0GX49 114 aa7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 IGHV4-31P0DP07 118 aa7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 C9orf85Q96MD7 179 aa7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 A0A087WVE0 104 aa7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 LINC00526Q96FQ7 95 aa7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 C11orf45Q8TAV5 145 aa7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 A0A087WZ39 114 aa7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
CDK5RAP2-216ENST00000483412 LOC100131303A0A0U1RQF7 123 aa7.02□□□□□ -1.29
CDK5RAP2-216ENST00000483412 ACACBO00763 2458 aa7.02□□□□□ -1.29
CDK5RAP2-216ENST00000483412 COL5A1P20908 1838 aaPredicted RBP7.02□□□□□ -1.29
CDK5RAP2-216ENST00000483412 Q6ZSV7 163 aa7.02□□□□□ -1.29
CDK5RAP2-216ENST00000483412 C14orf177Q52M58 125 aa7.02□□□□□ -1.29
CDK5RAP2-216ENST00000483412 SERTAD4-AS1Q5TG53 156 aa7.02□□□□□ -1.29
CDK5RAP2-216ENST00000483412 TRAV7A0A075B6U4 112 aa7.02□□□□□ -1.29
CDK5RAP2-216ENST00000483412 PLCE1Q9P212 2302 aa7.01□□□□□ -1.29
CDK5RAP2-216ENST00000483412 FSTL3O95633 263 aa7.01□□□□□ -1.29
CDK5RAP2-216ENST00000483412 CELA1Q9UNI1 258 aa7.01□□□□□ -1.29
CDK5RAP2-216ENST00000483412 C10orf99Q6UWK7 81 aa7.01□□□□□ -1.29
CDK5RAP2-216ENST00000483412 LINC00959A0A1B0GUT2 108 aa7.01□□□□□ -1.29
CDK5RAP2-216ENST00000483412 M0R378 163 aa7.01□□□□□ -1.29
CDK5RAP2-216ENST00000483412 EBI3Q14213 229 aa7.01□□□□□ -1.29
CDK5RAP2-216ENST00000483412 IGIPA6NJ69 53 aa7□□□□□ -1.29
CDK5RAP2-216ENST00000483412 PRM2P04554 102 aa7□□□□□ -1.29
CDK5RAP2-216ENST00000483412 BBC3Q96PG8 261 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms