RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MYO3AQ8NEV4 1616 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 PHRF1Q9P1Y6 1649 aaKnown RBP1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 MON2Q7Z3U7 1717 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 A0A0G2JND7 137 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 TRBV30A0A0K0K1B3 111 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 F8VRH5 84 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 UQCR11O14957 56 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 EFNA4P52798 201 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 COX17Q14061 63 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 SPINK13Q1W4C9 94 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 SMIM4Q8WVI0 70 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 SPCS1Q9Y6A9 102 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 DOCK2Q92608 1830 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 NLRP1Q9C000 1473 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 VWDEQ8N2E2 1590 aa1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 MYO18AQ92614 2054 aaKnown RBP1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 HMGXB3Q12766 1538 aa1.15□□□□□ -2.22
LAPTM4A-202ENST00000483117 ERICH3Q5RHP9 1530 aa1.15□□□□□ -2.22
LAPTM4A-202ENST00000483117 KCPQ6ZWJ8 1503 aa1.15□□□□□ -2.22
LAPTM4A-202ENST00000483117 KIF14Q15058 1648 aa1.15□□□□□ -2.22
LAPTM4A-202ENST00000483117 PARP14Q460N5 1801 aa1.15□□□□□ -2.22
LAPTM4A-202ENST00000483117 ZGRF1Q86YA3 2104 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 UNC13CQ8NB66 2214 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 A0A087WTM6 91 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 F2Z2F3 143 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 NCR3O14931 201 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 PSMG4Q5JS54 123 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 ALKAL2Q6UX46 152 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 BAGE2Q86Y30 109 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 LINC01558Q9Y6Z2 57 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 POLA1P09884 1462 aaPredicted RBP1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 CCDC141Q6ZP82 1450 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 KIAA0100Q14667 2235 aaKnown RBP1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 TCHHQ07283 1943 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 ANKARQ7Z5J8 1434 aa1.15□□□□□ -2.23
LAPTM4A-202ENST00000483117 ARFGEF3Q5TH69 2177 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 PCDH15Q96QU1 1955 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 PLXNA1Q9UIW2 1896 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 SIPA1L3O60292 1781 aaPredicted RBP1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 RGPD4Q7Z3J3 1758 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 LRRC9Q6ZRR7 1453 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 A0A1W2PPM0 123 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 ZNF815PA8K554 130 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 M0R135 149 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 MGPP08493 103 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 TDRG1Q3Y452 100 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 ETDBQ3ZM63 59 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 ARL2-SNX15V9GYD0 113 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 SUPT6HQ7KZ85 1726 aaKnown RBP1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 CACNA1GO43497 2377 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 DOCK10Q96BY6 2186 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 ABCC1P33527 1531 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 CASP8AP2Q9UKL3 1982 aa1.14□□□□□ -2.23
LAPTM4A-202ENST00000483117 CCDC88BA6NC98 1476 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 NCOA2Q15596 1464 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 FREM1Q5H8C1 2179 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 CTXND1A0A1B0GTU2 59 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 LINC00643Q86TS7 51 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 BPESC1Q9GZL8 116 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 HIGD1BQ9P298 99 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 GBF1Q92538 1859 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 COL4A6Q14031 1691 aa1.13□□□□□ -2.23
LAPTM4A-202ENST00000483117 PTPN23Q9H3S7 1636 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 CHD3Q12873 2000 aaKnown RBP1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 A0A096LNT2 108 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 SMIM31A0A1B0GVY4 71 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 A0A1B0GWA3 101 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 HMGN2P05204 90 aaKnown RBP1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 ACYP2P14621 99 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 FXYD6P3P58550 94 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 NMSQ5H8A3 153 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 FAM223AQ8IWN6 122 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 Q96NJ1 140 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 LINC00846Q9NV44 126 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 AFDNP55196 1824 aaKnown RBP1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 ARHGEF5Q12774 1597 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 CFAP74Q9C0B2 1584 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 EXPH5Q8NEV8 1989 aa1.12□□□□□ -2.23
LAPTM4A-202ENST00000483117 MED12Q93074 2177 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 RGPD3A6NKT7 1758 aaPredicted RBP1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 CDK13Q14004 1512 aaKnown RBP1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 PRRC2BQ5JSZ5 2229 aaKnown RBP1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 E9PCH4 1651 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 WNK3Q9BYP7 1800 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 TRGV1A0A0A0MS02 117 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 TRAV1-2A0A0B4J238 106 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 FAM223BA6NKX1 122 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 J3QKU1 62 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 PIN1P1O15428 100 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 CFAP126Q5VTH2 177 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 SMIM11BQ8TCY0 68 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 SMCO4Q9NRQ5 59 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 RAPGEF6Q8TEU7 1601 aa1.11□□□□□ -2.23
LAPTM4A-202ENST00000483117 PSME4Q14997 1843 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 COL4A1P02462 1669 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 CUX1P39880 1505 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 DIP2BQ9P265 1576 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 2075.5 ms