RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 IGIPA6NJ69 53 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 HSBP1L1C9JCN9 74 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 TMEM262E9PQX1 116 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 NPSP0C0P6 89 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 PKIAP61925 76 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 NTM-AS1Q6ZSK4 140 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 SPATA12Q7Z6I5 190 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 BAALCQ8WXS3 180 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 C2orf88Q9BSF0 95 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 PYGO1Q9Y3Y4 419 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 HERC1Q15751 4861 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 STARD9Q9P2P6 4700 aa8.68□□□□□ -1.02
TSPAN1-208ENST00000482928 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 FGF6P10767 208 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 GAGE6Q13070 117 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 PMVKQ15126 192 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 LINC01545Q5VT33 79 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 TEX43Q6ZNM6 134 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 LINC00518Q8N0U6 118 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 C15orf53Q8NAA6 179 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 VAMP8Q9BV40 100 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 TIMM21Q9BVV7 248 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 UBE2D4Q9Y2X8 147 aa8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
TSPAN1-208ENST00000482928 A0A087WX48 190 aa8.66□□□□□ -1.02
TSPAN1-208ENST00000482928 TRAV8-6A0A0B4J262 113 aa8.66□□□□□ -1.02
TSPAN1-208ENST00000482928 ZNF25P17030 456 aaPredicted RBP8.66□□□□□ -1.02
TSPAN1-208ENST00000482928 ZFAND6Q6FIF0 208 aa8.66□□□□□ -1.02
TSPAN1-208ENST00000482928 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
TSPAN1-208ENST00000482928 PMCHL2Q9BQD1 86 aa8.66□□□□□ -1.02
TSPAN1-208ENST00000482928 IGLV4-3A0A075B6K6 122 aa8.65□□□□□ -1.02
TSPAN1-208ENST00000482928 DPM2O94777 84 aa8.65□□□□□ -1.02
TSPAN1-208ENST00000482928 PLNP26678 52 aa8.65□□□□□ -1.02
TSPAN1-208ENST00000482928 LELP1Q5T871 98 aa8.65□□□□□ -1.02
TSPAN1-208ENST00000482928 CEMP1Q6PRD7 247 aaPredicted RBP8.65□□□□□ -1.02
TSPAN1-208ENST00000482928 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
TSPAN1-208ENST00000482928 PRSS29PA6NIE9 313 aa8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 IGLL5B9A064 214 aa8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 F8VRH5 84 aa8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 IGKCP01834 107 aa8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 MRPS36P82909 103 aaKnown RBP8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 ODF1Q14990 250 aa8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 Q6ZUT4 128 aa8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 Q8N976 141 aa8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 OPRPNQ99935 248 aaPredicted RBP8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 CST9LQ9H4G1 147 aa8.64□□□□□ -1.03
TSPAN1-208ENST00000482928 ZNF664Q8N3J9 261 aa8.63□□□□□ -1.03
TSPAN1-208ENST00000482928 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
TSPAN1-208ENST00000482928 CSDC2Q9Y534 153 aaKnown RBP8.63□□□□□ -1.03
TSPAN1-208ENST00000482928 TRAV9-2A0A087WT02 112 aa8.62□□□□□ -1.03
TSPAN1-208ENST00000482928 TIRAPP58753 221 aa8.62□□□□□ -1.03
TSPAN1-208ENST00000482928 RNASE13Q5GAN3 156 aaKnown RBP8.62□□□□□ -1.03
TSPAN1-208ENST00000482928 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
TSPAN1-208ENST00000482928 PAM16Q9Y3D7 125 aa8.62□□□□□ -1.03
TSPAN1-208ENST00000482928 KLK5Q9Y337 293 aaPredicted RBP8.61□□□□□ -1.03
TSPAN1-208ENST00000482928 NUPR2A6NF83 97 aa8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 CCL18P55774 89 aa8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 HERVK_113P61574 105 aa8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 SPATA45Q537H7 98 aa8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 ZC2HC1BQ5TFG8 222 aa8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 AMELXQ99217 191 aa8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 GEMIN7Q9H840 131 aaKnown RBP8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 CDC42SE2Q9NRR3 84 aa8.6□□□□□ -1.03
TSPAN1-208ENST00000482928 IGKV3OR2-268A0A0C4DH90 116 aa8.59□□□□□ -1.03
TSPAN1-208ENST00000482928 TSTD3H0UI37 97 aa8.59□□□□□ -1.03
TSPAN1-208ENST00000482928 RBX1P62877 108 aa8.59□□□□□ -1.03
TSPAN1-208ENST00000482928 SEC11AP67812 179 aa8.59□□□□□ -1.03
TSPAN1-208ENST00000482928 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
TSPAN1-208ENST00000482928 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
TSPAN1-208ENST00000482928 A0A1B0GUV1 79 aa8.58□□□□□ -1.04
TSPAN1-208ENST00000482928 hDV102S1A0JD36 115 aa8.58□□□□□ -1.04
TSPAN1-208ENST00000482928 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
TSPAN1-208ENST00000482928 MPV17L2Q567V2 206 aa8.58□□□□□ -1.04
TSPAN1-208ENST00000482928 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
TSPAN1-208ENST00000482928 KRTAP4-5Q9BYR2 181 aa8.58□□□□□ -1.04
TSPAN1-208ENST00000482928 A0A0J9YXV3 536 aa8.57□□□□□ -1.04
TSPAN1-208ENST00000482928 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
TSPAN1-208ENST00000482928 ESRGQ1W209 222 aa8.57□□□□□ -1.04
TSPAN1-208ENST00000482928 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 H3BRM9 83 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 CRPP02741 224 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 UBE2D1P51668 147 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 HERVK_113P63121 156 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 SS18Q15532 418 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 MAJINQ3KP22 176 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 UBE2DNLQ8IWF7 75 aa8.56□□□□□ -1.04
TSPAN1-208ENST00000482928 IGHV3-30P01768 117 aa8.55□□□□□ -1.04
TSPAN1-208ENST00000482928 IGHV3-33P01772 117 aa8.55□□□□□ -1.04
TSPAN1-208ENST00000482928 IGHV3-30-3P0DP02 117 aa8.55□□□□□ -1.04
TSPAN1-208ENST00000482928 IGHV3-30-5P0DP03 117 aa8.55□□□□□ -1.04
TSPAN1-208ENST00000482928 TCTAP57738 103 aa8.55□□□□□ -1.04
TSPAN1-208ENST00000482928 NFE4Q86UQ8 179 aa8.55□□□□□ -1.04
TSPAN1-208ENST00000482928 LINC00469Q8N7U9 141 aa8.55□□□□□ -1.04
TSPAN1-208ENST00000482928 STPG4Q8N801 248 aa8.55□□□□□ -1.04
TSPAN1-208ENST00000482928 PRO1933Q9H354 126 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms