RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 I3L3M4 83 aa9.16□□□□□ -0.94
CCDC78-213ENST00000482878 AVPP01185 164 aa9.16□□□□□ -0.94
CCDC78-213ENST00000482878 IGLV1-40P01703 118 aa9.16□□□□□ -0.94
CCDC78-213ENST00000482878 TRACP01848 142 aa9.16□□□□□ -0.94
CCDC78-213ENST00000482878 LINC00643Q86TS7 51 aa9.16□□□□□ -0.94
CCDC78-213ENST00000482878 COX7CP15954 63 aa9.15□□□□□ -0.94
CCDC78-213ENST00000482878 TIMM17AQ99595 171 aa9.15□□□□□ -0.94
CCDC78-213ENST00000482878 IMUPQ9GZP8 106 aa9.15□□□□□ -0.94
CCDC78-213ENST00000482878 TRAV13-1A0A0B4J241 112 aa9.15□□□□□ -0.94
CCDC78-213ENST00000482878 LST1O00453 97 aa9.15□□□□□ -0.94
CCDC78-213ENST00000482878 RHOHQ15669 191 aa9.15□□□□□ -0.94
CCDC78-213ENST00000482878 TIMM21Q9BVV7 248 aa9.15□□□□□ -0.94
CCDC78-213ENST00000482878 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.95
CCDC78-213ENST00000482878 DEFB136Q30KP8 78 aa9.15□□□□□ -0.95
CCDC78-213ENST00000482878 DAND5Q8N907 189 aa9.15□□□□□ -0.95
CCDC78-213ENST00000482878 MXRA5Q9NR99 2828 aa9.14□□□□□ -0.95
CCDC78-213ENST00000482878 TRBV27A0A0K0K1C4 114 aa9.14□□□□□ -0.95
CCDC78-213ENST00000482878 ACYP1P07311 99 aa9.14□□□□□ -0.95
CCDC78-213ENST00000482878 DEFB112Q30KQ8 113 aa9.14□□□□□ -0.95
CCDC78-213ENST00000482878 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
CCDC78-213ENST00000482878 SMCR5Q8TEV8 140 aa9.14□□□□□ -0.95
CCDC78-213ENST00000482878 IGHV3-16A0A0C4DH30 117 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 B4DSR2 109 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 F5H768 121 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 CFHR3Q02985 330 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 NSUN5P1Q3KNT7 163 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 C10orf105Q8TEF2 133 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 IGHV3OR16-12A0A075B7B8 117 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 A0A1B0GX51 115 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 IGHV3-30-3P0DP02 117 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 HRCT1Q6UXD1 115 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 NDUFA12Q9UI09 145 aa9.13□□□□□ -0.95
CCDC78-213ENST00000482878 TRBV6-5A0A0K0K1A5 114 aa9.12□□□□□ -0.95
CCDC78-213ENST00000482878 M0QY20 66 aa9.12□□□□□ -0.95
CCDC78-213ENST00000482878 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
CCDC78-213ENST00000482878 KRTAP10-9P60411 292 aa9.12□□□□□ -0.95
CCDC78-213ENST00000482878 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
CCDC78-213ENST00000482878 C9orf85Q96MD7 179 aa9.12□□□□□ -0.95
CCDC78-213ENST00000482878 DSCR8Q96T75 97 aa9.12□□□□□ -0.95
CCDC78-213ENST00000482878 BBC3Q96PG8 261 aaPredicted RBP9.12□□□□□ -0.95
CCDC78-213ENST00000482878 K7EMT4 169 aa9.12□□□□□ -0.95
CCDC78-213ENST00000482878 ADAMTSL4-AS1Q5T5F5 129 aa9.12□□□□□ -0.95
CCDC78-213ENST00000482878 A8MZ25 164 aa9.11□□□□□ -0.95
CCDC78-213ENST00000482878 C4orf26Q17RF5 130 aa9.1□□□□□ -0.95
CCDC78-213ENST00000482878 CD28P10747 220 aa9.1□□□□□ -0.95
CCDC78-213ENST00000482878 DAZ2Q13117 558 aaKnown RBP9.1□□□□□ -0.95
CCDC78-213ENST00000482878 DAZ4Q86SG3 579 aaKnown RBP9.1□□□□□ -0.95
CCDC78-213ENST00000482878 DAZ3Q9NR90 486 aaKnown RBP9.1□□□□□ -0.95
CCDC78-213ENST00000482878 A0A0J9YX75 114 aa9.1□□□□□ -0.95
CCDC78-213ENST00000482878 ATOX1O00244 68 aa9.1□□□□□ -0.95
CCDC78-213ENST00000482878 ATP5G1P05496 136 aa9.1□□□□□ -0.95
CCDC78-213ENST00000482878 SPINK13Q1W4C9 94 aa9.1□□□□□ -0.95
CCDC78-213ENST00000482878 GCN1Q92616 2671 aaKnown RBP9.09□□□□□ -0.95
CCDC78-213ENST00000482878 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
CCDC78-213ENST00000482878 RNF152Q8N8N0 203 aa9.09□□□□□ -0.95
CCDC78-213ENST00000482878 PEMTQ9UBM1 199 aa9.09□□□□□ -0.95
CCDC78-213ENST00000482878 IGKV3D-7A0A0C4DH55 119 aa9.09□□□□□ -0.95
CCDC78-213ENST00000482878 PSMB8P28062 276 aa9.09□□□□□ -0.95
CCDC78-213ENST00000482878 IGHV3-73A0A0B4J1V6 119 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 DEFB121Q5J5C9 76 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 TMEM61Q8N0U2 210 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 Q96MF0 132 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 IGHV1OR15-1A0A075B7D0 117 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 BAALC-AS2P0C853 105 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 MIAQ16674 131 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
CCDC78-213ENST00000482878 LINC01600Q96MT4 127 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 SPANXDQ9BXN6 97 aa9.08□□□□□ -0.96
CCDC78-213ENST00000482878 C20orf203Q8NBC4 194 aa9.07□□□□□ -0.96
CCDC78-213ENST00000482878 CRYGAP11844 174 aa9.07□□□□□ -0.96
CCDC78-213ENST00000482878 SNRPD3P62318 126 aaKnown RBP9.07□□□□□ -0.96
CCDC78-213ENST00000482878 CYSTM1Q9H1C7 97 aa9.07□□□□□ -0.96
CCDC78-213ENST00000482878 TEP1Q99973 2627 aaKnown RBP9.07□□□□□ -0.96
CCDC78-213ENST00000482878 K7EQG2 157 aa9.06□□□□□ -0.96
CCDC78-213ENST00000482878 NBEAL2Q6ZNJ1 2754 aa9.06□□□□□ -0.96
CCDC78-213ENST00000482878 IGLV4-3A0A075B6K6 122 aa9.06□□□□□ -0.96
CCDC78-213ENST00000482878 RPS28P62857 69 aaKnown RBP9.06□□□□□ -0.96
CCDC78-213ENST00000482878 DPH3Q96FX2 82 aa9.06□□□□□ -0.96
CCDC78-213ENST00000482878 WIPF1O43516 503 aa9.05□□□□□ -0.96
CCDC78-213ENST00000482878 DNAL4O96015 105 aa9.05□□□□□ -0.96
CCDC78-213ENST00000482878 TIRAPP58753 221 aa9.05□□□□□ -0.96
CCDC78-213ENST00000482878 LITAFQ99732 161 aa9.05□□□□□ -0.96
CCDC78-213ENST00000482878 PRM2P04554 102 aa9.04□□□□□ -0.96
CCDC78-213ENST00000482878 LINC01356Q8N9X3 169 aa9.04□□□□□ -0.96
CCDC78-213ENST00000482878 TMEM258P61165 79 aa9.04□□□□□ -0.96
CCDC78-213ENST00000482878 APCP25054 2843 aa9.04□□□□□ -0.96
CCDC78-213ENST00000482878 RBMY1A1P0DJD3 496 aaKnown RBP9.04□□□□□ -0.96
CCDC78-213ENST00000482878 RBMY1CP0DJD4 496 aa9.04□□□□□ -0.96
CCDC78-213ENST00000482878 PROK1P58294 105 aa9.04□□□□□ -0.96
CCDC78-213ENST00000482878 RBMY1FQ15415 496 aaKnown RBP9.04□□□□□ -0.96
CCDC78-213ENST00000482878 IGHV1-58A0A0C4DH39 117 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 HOXD3P31249 432 aaPredicted RBP9.03□□□□□ -0.96
CCDC78-213ENST00000482878 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 NIPBLQ6KC79 2804 aaeCLIP9.03□□□□□ -0.96
CCDC78-213ENST00000482878 ATRQ13535 2644 aa9.03□□□□□ -0.96
CCDC78-213ENST00000482878 A0A087WVE0 104 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms