RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 WFDC2Q14508 124 aa10.95□□□□□ -0.66
HMGN1-214ENST00000482733 MAP1LC3AQ9H492 121 aa10.95□□□□□ -0.66
HMGN1-214ENST00000482733 HERC2O95714 4834 aa10.94□□□□□ -0.66
HMGN1-214ENST00000482733 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
HMGN1-214ENST00000482733 HLA-DQA1P01909 254 aa10.94□□□□□ -0.66
HMGN1-214ENST00000482733 RAB5AP20339 215 aa10.94□□□□□ -0.66
HMGN1-214ENST00000482733 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
HMGN1-214ENST00000482733 GNB1LQ9BYB4 327 aa10.94□□□□□ -0.66
HMGN1-214ENST00000482733 CSDC2Q9Y534 153 aaKnown RBP10.94□□□□□ -0.66
HMGN1-214ENST00000482733 KRTAP26-1Q6PEX3 210 aa10.93□□□□□ -0.66
HMGN1-214ENST00000482733 RYR1P21817 5038 aa10.93□□□□□ -0.66
HMGN1-214ENST00000482733 GCSHP23434 173 aa10.92□□□□□ -0.66
HMGN1-214ENST00000482733 FUSP35637 526 aaKnown RBP eCLIP10.92□□□□□ -0.66
HMGN1-214ENST00000482733 ZNF664Q8N3J9 261 aa10.92□□□□□ -0.66
HMGN1-214ENST00000482733 TIMM21Q9BVV7 248 aa10.92□□□□□ -0.66
HMGN1-214ENST00000482733 CDC42SE2Q9NRR3 84 aa10.92□□□□□ -0.66
HMGN1-214ENST00000482733 UBE2D4Q9Y2X8 147 aa10.92□□□□□ -0.66
HMGN1-214ENST00000482733 APOBP04114 4563 aaKnown RBP10.91□□□□□ -0.66
HMGN1-214ENST00000482733 IGKV3OR2-268A0A0C4DH90 116 aa10.91□□□□□ -0.66
HMGN1-214ENST00000482733 CDK2AP2O75956 126 aa10.91□□□□□ -0.66
HMGN1-214ENST00000482733 MT-ND6P03923 174 aa10.91□□□□□ -0.66
HMGN1-214ENST00000482733 LOC389332A0A1B0GUA5 103 aa10.9□□□□□ -0.66
HMGN1-214ENST00000482733 USP17L23D6RBM5 183 aa10.9□□□□□ -0.66
HMGN1-214ENST00000482733 Q8N8P6 123 aa10.9□□□□□ -0.66
HMGN1-214ENST00000482733 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.89□□□□□ -0.67
HMGN1-214ENST00000482733 K7EMI3 77 aa10.89□□□□□ -0.67
HMGN1-214ENST00000482733 CHCHD10Q8WYQ3 142 aaPredicted RBP10.89□□□□□ -0.67
HMGN1-214ENST00000482733 SPANXA1Q9NS26 97 aa10.89□□□□□ -0.67
HMGN1-214ENST00000482733 LINC00959A0A1B0GUT2 108 aa10.88□□□□□ -0.67
HMGN1-214ENST00000482733 GAGE12HA6NDE8 117 aa10.88□□□□□ -0.67
HMGN1-214ENST00000482733 CCL25O15444 150 aa10.88□□□□□ -0.67
HMGN1-214ENST00000482733 SS18Q15532 418 aa10.88□□□□□ -0.67
HMGN1-214ENST00000482733 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
HMGN1-214ENST00000482733 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
HMGN1-214ENST00000482733 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
HMGN1-214ENST00000482733 ORMDL2Q53FV1 153 aa10.87□□□□□ -0.67
HMGN1-214ENST00000482733 RPL39P62891 51 aaKnown RBP10.86□□□□□ -0.67
HMGN1-214ENST00000482733 CFAP161Q6P656 301 aa10.86□□□□□ -0.67
HMGN1-214ENST00000482733 MRPL18Q9H0U6 180 aaKnown RBP10.86□□□□□ -0.67
HMGN1-214ENST00000482733 HSPG2P98160 4391 aa10.86□□□□□ -0.67
HMGN1-214ENST00000482733 DNAH8Q96JB1 4490 aa10.86□□□□□ -0.67
HMGN1-214ENST00000482733 TGIF2-C20orf24A0A0A6YYL0 155 aa10.85□□□□□ -0.67
HMGN1-214ENST00000482733 C1orf196B1AJZ1 125 aa10.85□□□□□ -0.67
HMGN1-214ENST00000482733 G0S2P27469 103 aa10.85□□□□□ -0.67
HMGN1-214ENST00000482733 IFI27P40305 119 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-214ENST00000482733 MRPS36P82909 103 aaKnown RBP10.85□□□□□ -0.67
HMGN1-214ENST00000482733 FABP9Q0Z7S8 132 aa10.85□□□□□ -0.67
HMGN1-214ENST00000482733 PRSS1P07477 247 aa10.84□□□□□ -0.67
HMGN1-214ENST00000482733 XCL1P47992 114 aa10.84□□□□□ -0.67
HMGN1-214ENST00000482733 Q6ZUT4 128 aa10.84□□□□□ -0.67
HMGN1-214ENST00000482733 SLC7A5P1Q8MH63 180 aa10.84□□□□□ -0.67
HMGN1-214ENST00000482733 ALKBH7Q9BT30 221 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-214ENST00000482733 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
HMGN1-214ENST00000482733 FOXI1Q12951 378 aa10.83□□□□□ -0.68
HMGN1-214ENST00000482733 CD164L2Q6UWJ8 174 aa10.83□□□□□ -0.68
HMGN1-214ENST00000482733 CYSLTR1Q9Y271 337 aa10.83□□□□□ -0.68
HMGN1-214ENST00000482733 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
HMGN1-214ENST00000482733 AP5S1Q9NUS5 200 aa10.82□□□□□ -0.68
HMGN1-214ENST00000482733 TRAPPC1Q9Y5R8 145 aa10.82□□□□□ -0.68
HMGN1-214ENST00000482733 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
HMGN1-214ENST00000482733 hDV102S1A0JD36 115 aa10.81□□□□□ -0.68
HMGN1-214ENST00000482733 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
HMGN1-214ENST00000482733 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
HMGN1-214ENST00000482733 NPSP0C0P6 89 aa10.8□□□□□ -0.68
HMGN1-214ENST00000482733 SMCO4Q9NRQ5 59 aa10.8□□□□□ -0.68
HMGN1-214ENST00000482733 CNBPP62633 177 aaKnown RBP10.79□□□□□ -0.68
HMGN1-214ENST00000482733 C15orf56Q8N910 161 aa10.79□□□□□ -0.68
HMGN1-214ENST00000482733 FAM104AQ969W3 186 aa10.79□□□□□ -0.68
HMGN1-214ENST00000482733 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
HMGN1-214ENST00000482733 IGLV4-3A0A075B6K6 122 aa10.78□□□□□ -0.68
HMGN1-214ENST00000482733 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-214ENST00000482733 IGHV1-58A0A0C4DH39 117 aa10.78□□□□□ -0.68
HMGN1-214ENST00000482733 LINC01549A6NIU2 74 aa10.78□□□□□ -0.68
HMGN1-214ENST00000482733 IFITM10A6NMD0 228 aa10.78□□□□□ -0.68
HMGN1-214ENST00000482733 TMEM141Q96I45 108 aa10.78□□□□□ -0.68
HMGN1-214ENST00000482733 YPEL4Q96NS1 127 aa10.78□□□□□ -0.68
HMGN1-214ENST00000482733 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-214ENST00000482733 LINC01546A6NGU7 62 aa10.77□□□□□ -0.69
HMGN1-214ENST00000482733 COX7A2LO14548 114 aa10.77□□□□□ -0.69
HMGN1-214ENST00000482733 XGP55808 180 aa10.77□□□□□ -0.69
HMGN1-214ENST00000482733 Q6ZN92 141 aa10.77□□□□□ -0.69
HMGN1-214ENST00000482733 FA2HQ7L5A8 372 aa10.77□□□□□ -0.69
HMGN1-214ENST00000482733 C9orf163Q8N9P6 203 aa10.77□□□□□ -0.69
HMGN1-214ENST00000482733 MALP21145 153 aa10.76□□□□□ -0.69
HMGN1-214ENST00000482733 LINC01620Q4KN68 170 aa10.76□□□□□ -0.69
HMGN1-214ENST00000482733 PAPPA-AS1Q5QFB9 102 aa10.76□□□□□ -0.69
HMGN1-214ENST00000482733 TEX43Q6ZNM6 134 aa10.76□□□□□ -0.69
HMGN1-214ENST00000482733 TOMM6Q96B49 74 aa10.76□□□□□ -0.69
HMGN1-214ENST00000482733 C2orf88Q9BSF0 95 aa10.76□□□□□ -0.69
HMGN1-214ENST00000482733 IGIPA6NJ69 53 aa10.75□□□□□ -0.69
HMGN1-214ENST00000482733 HIGD2BQ4VC39 106 aa10.75□□□□□ -0.69
HMGN1-214ENST00000482733 Q6ZSA8 131 aa10.75□□□□□ -0.69
HMGN1-214ENST00000482733 CBLN2Q8IUK8 224 aa10.75□□□□□ -0.69
HMGN1-214ENST00000482733 TIMM17AQ99595 171 aa10.75□□□□□ -0.69
HMGN1-214ENST00000482733 VCX2Q9H322 139 aa10.75□□□□□ -0.69
HMGN1-214ENST00000482733 APOMO95445 188 aa10.74□□□□□ -0.69
HMGN1-214ENST00000482733 FAM30AQ9NZY2 134 aa10.74□□□□□ -0.69
HMGN1-214ENST00000482733 SLPIP03973 132 aa10.73□□□□□ -0.69
HMGN1-214ENST00000482733 C18orf32Q8TCD1 76 aa10.73□□□□□ -0.69
HMGN1-214ENST00000482733 AMELXQ99217 191 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 256.5 ms