RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FUSP35637 526 aaKnown RBP eCLIP13.81□□□□□ -0.2
SEC13-217ENST00000482647 COX19Q49B96 90 aa13.81□□□□□ -0.2
SEC13-217ENST00000482647 GNB1LQ9BYB4 327 aa13.81□□□□□ -0.2
SEC13-217ENST00000482647 MAP1LC3AQ9H492 121 aa13.81□□□□□ -0.2
SEC13-217ENST00000482647 HLA-DQA1P01909 254 aa13.8□□□□□ -0.2
SEC13-217ENST00000482647 DGAT2L7PQ6IED9 249 aa13.8□□□□□ -0.2
SEC13-217ENST00000482647 IGLV5-52A0A0A0MRZ9 124 aa13.79□□□□□ -0.2
SEC13-217ENST00000482647 IGKV3OR2-268A0A0C4DH90 116 aa13.79□□□□□ -0.2
SEC13-217ENST00000482647 LOC389332A0A1B0GUA5 103 aa13.79□□□□□ -0.2
SEC13-217ENST00000482647 KRTAP26-1Q6PEX3 210 aa13.79□□□□□ -0.2
SEC13-217ENST00000482647 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
SEC13-217ENST00000482647 CSDC2Q9Y534 153 aaKnown RBP13.78□□□□□ -0.2
SEC13-217ENST00000482647 RYR1P21817 5038 aa13.77□□□□□ -0.2
SEC13-217ENST00000482647 HERC2O95714 4834 aa13.77□□□□□ -0.21
SEC13-217ENST00000482647 C14orf177Q52M58 125 aa13.77□□□□□ -0.21
SEC13-217ENST00000482647 SLC7A5P1Q8MH63 180 aa13.77□□□□□ -0.21
SEC13-217ENST00000482647 ZNF664Q8N3J9 261 aa13.77□□□□□ -0.21
SEC13-217ENST00000482647 UBE2D4Q9Y2X8 147 aa13.77□□□□□ -0.21
SEC13-217ENST00000482647 MT-ND6P03923 174 aa13.76□□□□□ -0.21
SEC13-217ENST00000482647 KIAA1644Q3SXP7 199 aa13.76□□□□□ -0.21
SEC13-217ENST00000482647 Q8N8P6 123 aa13.76□□□□□ -0.21
SEC13-217ENST00000482647 TIMM21Q9BVV7 248 aa13.76□□□□□ -0.21
SEC13-217ENST00000482647 USP17L23D6RBM5 183 aa13.75□□□□□ -0.21
SEC13-217ENST00000482647 GCSHP23434 173 aa13.75□□□□□ -0.21
SEC13-217ENST00000482647 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.73□□□□□ -0.21
SEC13-217ENST00000482647 TGIF2-C20orf24A0A0A6YYL0 155 aa13.73□□□□□ -0.21
SEC13-217ENST00000482647 GAGE12HA6NDE8 117 aa13.73□□□□□ -0.21
SEC13-217ENST00000482647 RPL39P62891 51 aaKnown RBP13.73□□□□□ -0.21
SEC13-217ENST00000482647 CHCHD10Q8WYQ3 142 aaPredicted RBP13.73□□□□□ -0.21
SEC13-217ENST00000482647 NXT2Q9NPJ8 142 aaKnown RBP13.73□□□□□ -0.21
SEC13-217ENST00000482647 LINC00959A0A1B0GUT2 108 aa13.72□□□□□ -0.21
SEC13-217ENST00000482647 K7EMI3 77 aa13.72□□□□□ -0.21
SEC13-217ENST00000482647 FABP9Q0Z7S8 132 aa13.72□□□□□ -0.21
SEC13-217ENST00000482647 MRPL18Q9H0U6 180 aaKnown RBP13.72□□□□□ -0.21
SEC13-217ENST00000482647 SPANXA1Q9NS26 97 aa13.72□□□□□ -0.21
SEC13-217ENST00000482647 CDK2AP2O75956 126 aa13.71□□□□□ -0.21
SEC13-217ENST00000482647 SS18Q15532 418 aa13.71□□□□□ -0.21
SEC13-217ENST00000482647 KRTAP10-1P60331 282 aa13.7□□□□□ -0.22
SEC13-217ENST00000482647 ORMDL2Q53FV1 153 aa13.7□□□□□ -0.22
SEC13-217ENST00000482647 ALKBH7Q9BT30 221 aaPredicted RBP13.7□□□□□ -0.22
SEC13-217ENST00000482647 IFI27P40305 119 aaPredicted RBP13.69□□□□□ -0.22
SEC13-217ENST00000482647 APOBP04114 4563 aaKnown RBP13.68□□□□□ -0.22
SEC13-217ENST00000482647 CCL25O15444 150 aa13.68□□□□□ -0.22
SEC13-217ENST00000482647 XCL1P47992 114 aa13.68□□□□□ -0.22
SEC13-217ENST00000482647 CFAP161Q6P656 301 aa13.68□□□□□ -0.22
SEC13-217ENST00000482647 TRAPPC1Q9Y5R8 145 aa13.68□□□□□ -0.22
SEC13-217ENST00000482647 C1orf196B1AJZ1 125 aa13.67□□□□□ -0.22
SEC13-217ENST00000482647 PRSS1P07477 247 aa13.67□□□□□ -0.22
SEC13-217ENST00000482647 MRPS36P82909 103 aaKnown RBP13.67□□□□□ -0.22
SEC13-217ENST00000482647 RNASE13Q5GAN3 156 aaKnown RBP13.67□□□□□ -0.22
SEC13-217ENST00000482647 Q6ZUT4 128 aa13.67□□□□□ -0.22
SEC13-217ENST00000482647 PRSS3P2Q8NHM4 247 aa13.67□□□□□ -0.22
SEC13-217ENST00000482647 PYGO1Q9Y3Y4 419 aa13.67□□□□□ -0.22
SEC13-217ENST00000482647 G0S2P27469 103 aa13.66□□□□□ -0.22
SEC13-217ENST00000482647 FOXI1Q12951 378 aa13.66□□□□□ -0.22
SEC13-217ENST00000482647 CD164L2Q6UWJ8 174 aa13.66□□□□□ -0.22
SEC13-217ENST00000482647 SMCO4Q9NRQ5 59 aa13.66□□□□□ -0.22
SEC13-217ENST00000482647 CYSLTR1Q9Y271 337 aa13.66□□□□□ -0.22
SEC13-217ENST00000482647 TRAV13-1A0A0B4J241 112 aa13.65□□□□□ -0.22
SEC13-217ENST00000482647 hDV102S1A0JD36 115 aa13.64□□□□□ -0.23
SEC13-217ENST00000482647 C2orf66Q6UXQ4 117 aa13.64□□□□□ -0.23
SEC13-217ENST00000482647 FAM104AQ969W3 186 aa13.64□□□□□ -0.23
SEC13-217ENST00000482647 YPEL4Q96NS1 127 aa13.64□□□□□ -0.23
SEC13-217ENST00000482647 OPRPNQ99935 248 aaPredicted RBP13.64□□□□□ -0.23
SEC13-217ENST00000482647 HSPG2P98160 4391 aa13.62□□□□□ -0.23
SEC13-217ENST00000482647 CBLN2Q8IUK8 224 aa13.62□□□□□ -0.23
SEC13-217ENST00000482647 AP5S1Q9NUS5 200 aa13.62□□□□□ -0.23
SEC13-217ENST00000482647 C15orf56Q8N910 161 aa13.61□□□□□ -0.23
SEC13-217ENST00000482647 IGLV4-3A0A075B6K6 122 aa13.6□□□□□ -0.23
SEC13-217ENST00000482647 IFITM10A6NMD0 228 aa13.6□□□□□ -0.23
SEC13-217ENST00000482647 TMEM141Q96I45 108 aa13.6□□□□□ -0.23
SEC13-217ENST00000482647 LINC01546A6NGU7 62 aa13.59□□□□□ -0.23
SEC13-217ENST00000482647 NPSP0C0P6 89 aa13.59□□□□□ -0.23
SEC13-217ENST00000482647 CNBPP62633 177 aaKnown RBP13.59□□□□□ -0.23
SEC13-217ENST00000482647 LINC01620Q4KN68 170 aa13.59□□□□□ -0.23
SEC13-217ENST00000482647 FA2HQ7L5A8 372 aa13.59□□□□□ -0.23
SEC13-217ENST00000482647 IGHV1-58A0A0C4DH39 117 aa13.58□□□□□ -0.24
SEC13-217ENST00000482647 IGIPA6NJ69 53 aa13.58□□□□□ -0.24
SEC13-217ENST00000482647 COX7A2LO14548 114 aa13.58□□□□□ -0.24
SEC13-217ENST00000482647 Q6ZN92 141 aa13.58□□□□□ -0.24
SEC13-217ENST00000482647 TEX43Q6ZNM6 134 aa13.58□□□□□ -0.24
SEC13-217ENST00000482647 TOMM6Q96B49 74 aa13.58□□□□□ -0.24
SEC13-217ENST00000482647 GVQW2A0A096LPI5 108 aaPredicted RBP13.57□□□□□ -0.24
SEC13-217ENST00000482647 MALP21145 153 aa13.57□□□□□ -0.24
SEC13-217ENST00000482647 XGP55808 180 aa13.57□□□□□ -0.24
SEC13-217ENST00000482647 HIGD2BQ4VC39 106 aa13.57□□□□□ -0.24
SEC13-217ENST00000482647 C9orf163Q8N9P6 203 aa13.57□□□□□ -0.24
SEC13-217ENST00000482647 VCX2Q9H322 139 aa13.57□□□□□ -0.24
SEC13-217ENST00000482647 DNAH8Q96JB1 4490 aa13.56□□□□□ -0.24
SEC13-217ENST00000482647 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.56□□□□□ -0.24
SEC13-217ENST00000482647 LINC01549A6NIU2 74 aa13.56□□□□□ -0.24
SEC13-217ENST00000482647 PAPPA-AS1Q5QFB9 102 aa13.56□□□□□ -0.24
SEC13-217ENST00000482647 C2orf88Q9BSF0 95 aa13.56□□□□□ -0.24
SEC13-217ENST00000482647 C18orf32Q8TCD1 76 aa13.55□□□□□ -0.24
SEC13-217ENST00000482647 FAM30AQ9NZY2 134 aa13.55□□□□□ -0.24
SEC13-217ENST00000482647 SLPIP03973 132 aa13.54□□□□□ -0.24
SEC13-217ENST00000482647 ERASQ7Z444 233 aa13.54□□□□□ -0.24
SEC13-217ENST00000482647 SCGB3A1Q96QR1 104 aa13.54□□□□□ -0.24
SEC13-217ENST00000482647 TIMM17AQ99595 171 aa13.54□□□□□ -0.24
SEC13-217ENST00000482647 Q6ZSA8 131 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms