RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 A6NDX4 124 aa11.23□□□□□ -0.61
CNKSR1-207ENST00000482227 FAM222AQ5U5X8 452 aa11.22□□□□□ -0.61
CNKSR1-207ENST00000482227 LRRC75A-AS1Q8N1F1 130 aa11.22□□□□□ -0.61
CNKSR1-207ENST00000482227 IGHV3OR16-12A0A075B7B8 117 aa11.22□□□□□ -0.61
CNKSR1-207ENST00000482227 IGHV4-38-2P0DP08 117 aa11.22□□□□□ -0.61
CNKSR1-207ENST00000482227 CRYGAP11844 174 aa11.22□□□□□ -0.61
CNKSR1-207ENST00000482227 AKAP6Q13023 2319 aa11.21□□□□□ -0.61
CNKSR1-207ENST00000482227 A0A1B0GX51 115 aa11.21□□□□□ -0.61
CNKSR1-207ENST00000482227 GAGE2AQ6NT46 116 aa11.21□□□□□ -0.61
CNKSR1-207ENST00000482227 CYSTM1Q9H1C7 97 aa11.21□□□□□ -0.61
CNKSR1-207ENST00000482227 J3KT08 172 aa11.2□□□□□ -0.62
CNKSR1-207ENST00000482227 KLRB1Q12918 225 aa11.2□□□□□ -0.62
CNKSR1-207ENST00000482227 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
CNKSR1-207ENST00000482227 LINC00242Q5T6M2 205 aa11.2□□□□□ -0.62
CNKSR1-207ENST00000482227 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
CNKSR1-207ENST00000482227 Q9HAA7 133 aa11.19□□□□□ -0.62
CNKSR1-207ENST00000482227 SORL1Q92673 2214 aa11.19□□□□□ -0.62
CNKSR1-207ENST00000482227 UCNP55089 124 aa11.19□□□□□ -0.62
CNKSR1-207ENST00000482227 PRORYQ9H606 182 aa11.19□□□□□ -0.62
CNKSR1-207ENST00000482227 SMIM1B2RUZ4 78 aa11.18□□□□□ -0.62
CNKSR1-207ENST00000482227 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
CNKSR1-207ENST00000482227 C10orf99Q6UWK7 81 aa11.18□□□□□ -0.62
CNKSR1-207ENST00000482227 hADV29S1A0JD25 119 aa11.17□□□□□ -0.62
CNKSR1-207ENST00000482227 ATP5J2P56134 94 aa11.17□□□□□ -0.62
CNKSR1-207ENST00000482227 MALP21145 153 aa11.17□□□□□ -0.62
CNKSR1-207ENST00000482227 PSMB8P28062 276 aa11.17□□□□□ -0.62
CNKSR1-207ENST00000482227 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
CNKSR1-207ENST00000482227 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
CNKSR1-207ENST00000482227 ATOX1O00244 68 aa11.16□□□□□ -0.62
CNKSR1-207ENST00000482227 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
CNKSR1-207ENST00000482227 HOXD3P31249 432 aaPredicted RBP11.16□□□□□ -0.62
CNKSR1-207ENST00000482227 C5orf47Q569G3 176 aa11.16□□□□□ -0.62
CNKSR1-207ENST00000482227 ACACBO00763 2458 aa11.16□□□□□ -0.62
CNKSR1-207ENST00000482227 IGHV3-53P01767 116 aa11.15□□□□□ -0.62
CNKSR1-207ENST00000482227 RPS28P62857 69 aaKnown RBP11.15□□□□□ -0.62
CNKSR1-207ENST00000482227 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.62
CNKSR1-207ENST00000482227 COPS9Q8WXC6 57 aa11.15□□□□□ -0.62
CNKSR1-207ENST00000482227 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
CNKSR1-207ENST00000482227 HIST2H2BCQ6DN03 193 aa11.15□□□□□ -0.62
CNKSR1-207ENST00000482227 HIST2H2BDQ6DRA6 164 aa11.15□□□□□ -0.62
CNKSR1-207ENST00000482227 DGAT2L7PQ6IED9 249 aa11.15□□□□□ -0.62
CNKSR1-207ENST00000482227 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
CNKSR1-207ENST00000482227 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
CNKSR1-207ENST00000482227 RBMY1BA6NDE4 496 aaKnown RBP11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 RBMY1EA6NEQ0 496 aaKnown RBP11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 RS1O15537 224 aa11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 RBMY1DP0C7P1 496 aaKnown RBP11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 RPL28P46779 137 aaKnown RBP11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 CRYBG3Q68DQ2 2970 aa11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 FAM19A3Q7Z5A8 133 aa11.13□□□□□ -0.63
CNKSR1-207ENST00000482227 F5H768 121 aa11.12□□□□□ -0.63
CNKSR1-207ENST00000482227 CREBBPQ92793 2442 aa11.12□□□□□ -0.63
CNKSR1-207ENST00000482227 IGHV4-61A0A0C4DH41 118 aa11.11□□□□□ -0.63
CNKSR1-207ENST00000482227 LINC00337Q8N6G1 96 aa11.11□□□□□ -0.63
CNKSR1-207ENST00000482227 A0A087WYN8 130 aa11.11□□□□□ -0.63
CNKSR1-207ENST00000482227 C11orf72Q8NBR9 251 aa11.11□□□□□ -0.63
CNKSR1-207ENST00000482227 UPK3BQ9BT76 320 aa11.11□□□□□ -0.63
CNKSR1-207ENST00000482227 C14orf132Q9NPU4 83 aa11.11□□□□□ -0.63
CNKSR1-207ENST00000482227 HIVEP3Q5T1R4 2406 aa11.11□□□□□ -0.63
CNKSR1-207ENST00000482227 IGKV3D-7A0A0C4DH55 119 aa11.1□□□□□ -0.63
CNKSR1-207ENST00000482227 ZNF415Q09FC8 603 aa11.1□□□□□ -0.63
CNKSR1-207ENST00000482227 KIR2DL5BQ8NHK3 375 aa11.1□□□□□ -0.63
CNKSR1-207ENST00000482227 LINC00846Q9NV44 126 aa11.1□□□□□ -0.63
CNKSR1-207ENST00000482227 MAP1AP78559 2803 aaPredicted RBP11.1□□□□□ -0.63
CNKSR1-207ENST00000482227 IGKV2-28A0A075B6P5 120 aa11.1□□□□□ -0.63
CNKSR1-207ENST00000482227 IGKV2D-28P01615 120 aa11.1□□□□□ -0.63
CNKSR1-207ENST00000482227 Q96MF0 132 aa11.1□□□□□ -0.63
CNKSR1-207ENST00000482227 A0A087WVE0 104 aa11.09□□□□□ -0.63
CNKSR1-207ENST00000482227 DNAL4O96015 105 aa11.09□□□□□ -0.63
CNKSR1-207ENST00000482227 TRAV13-2A0A0B4J235 113 aa11.09□□□□□ -0.63
CNKSR1-207ENST00000482227 A8MTW9 85 aa11.09□□□□□ -0.63
CNKSR1-207ENST00000482227 DEFB131AP59861 70 aa11.09□□□□□ -0.63
CNKSR1-207ENST00000482227 OBSCN-AS1Q96MR7 158 aa11.09□□□□□ -0.63
CNKSR1-207ENST00000482227 PF4P02776 101 aa11.08□□□□□ -0.64
CNKSR1-207ENST00000482227 DPH3Q96FX2 82 aa11.08□□□□□ -0.64
CNKSR1-207ENST00000482227 LINC01561Q8N1V8 128 aa11.08□□□□□ -0.64
CNKSR1-207ENST00000482227 OXTP01178 125 aa11.07□□□□□ -0.64
CNKSR1-207ENST00000482227 Q6JHZ5 121 aa11.07□□□□□ -0.64
CNKSR1-207ENST00000482227 SERP2Q8N6R1 65 aa11.07□□□□□ -0.64
CNKSR1-207ENST00000482227 ITPR1Q14643 2758 aa11.07□□□□□ -0.64
CNKSR1-207ENST00000482227 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
CNKSR1-207ENST00000482227 CRPP02741 224 aa11.07□□□□□ -0.64
CNKSR1-207ENST00000482227 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■□□□□ 11
CNKSR1-207ENST00000482227 TMEM89A2RUT3 159 aa11.06□□□□□ -0.64
CNKSR1-207ENST00000482227 NTM-AS1Q6ZSK4 140 aa11.06□□□□□ -0.64
CNKSR1-207ENST00000482227 SMIM11BQ8TCY0 68 aa11.06□□□□□ -0.64
CNKSR1-207ENST00000482227 TMEM258P61165 79 aa11.05□□□□□ -0.64
CNKSR1-207ENST00000482227 MIR7-3HGQ8N6C7 128 aa11.05□□□□□ -0.64
CNKSR1-207ENST00000482227 CDC42SE2Q9NRR3 84 aa11.05□□□□□ -0.64
CNKSR1-207ENST00000482227 AVPP01185 164 aa11.04□□□□□ -0.64
CNKSR1-207ENST00000482227 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
CNKSR1-207ENST00000482227 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
CNKSR1-207ENST00000482227 PKD1L2Q7Z442 2459 aa11.04□□□□□ -0.64
CNKSR1-207ENST00000482227 DSCR8Q96T75 97 aa11.03□□□□□ -0.64
CNKSR1-207ENST00000482227 OVOL2Q9BRP0 275 aa11.03□□□□□ -0.64
CNKSR1-207ENST00000482227 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
CNKSR1-207ENST00000482227 IGHV4-59P01825 116 aa11.02□□□□□ -0.64
CNKSR1-207ENST00000482227 C19orf84I3L1E1 186 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms