RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 SVBPQ8N300 66 aa0.24□□□□□ -2.37
RGPD6-209ENST00000480894 PLXNB2O15031 1838 aa0.24□□□□□ -2.37
RGPD6-209ENST00000480894 KDM3BQ7LBC6 1761 aa0.24□□□□□ -2.37
RGPD6-209ENST00000480894 CHKB-CPT1BH3BT56 60 aa0.23□□□□□ -2.37
RGPD6-209ENST00000480894 DCDP81605 110 aaKnown RBP0.23□□□□□ -2.37
RGPD6-209ENST00000480894 ASXL3Q9C0F0 2248 aa0.23□□□□□ -2.37
RGPD6-209ENST00000480894 POLQO75417 2590 aa0.23□□□□□ -2.37
RGPD6-209ENST00000480894 WDR7Q9Y4E6 1490 aa0.22□□□□□ -2.37
RGPD6-209ENST00000480894 F8P00451 2351 aa0.22□□□□□ -2.37
RGPD6-209ENST00000480894 TRAV22A0A0B4J277 110 aa0.22□□□□□ -2.37
RGPD6-209ENST00000480894 SFT2D2O95562 160 aa0.22□□□□□ -2.37
RGPD6-209ENST00000480894 Q6JHZ5 121 aa0.22□□□□□ -2.37
RGPD6-209ENST00000480894 C10orf71Q711Q0 1435 aa0.21□□□□□ -2.38
RGPD6-209ENST00000480894 LRP6O75581 1613 aa0.21□□□□□ -2.38
RGPD6-209ENST00000480894 IFITM1P13164 125 aa0.21□□□□□ -2.38
RGPD6-209ENST00000480894 CDC42SE2Q9NRR3 84 aa0.21□□□□□ -2.38
RGPD6-209ENST00000480894 UQCR10Q9UDW1 63 aa0.21□□□□□ -2.38
RGPD6-209ENST00000480894 PTPRZ1P23471 2315 aaPredicted RBP0.21□□□□□ -2.38
RGPD6-209ENST00000480894 CUL7Q14999 1698 aa0.21□□□□□ -2.38
RGPD6-209ENST00000480894 RIMS1Q86UR5 1692 aaKnown RBP0.21□□□□□ -2.38
RGPD6-209ENST00000480894 PSME4Q14997 1843 aa0.2□□□□□ -2.38
RGPD6-209ENST00000480894 GNG11P61952 73 aa0.2□□□□□ -2.38
RGPD6-209ENST00000480894 KIF21AQ7Z4S6 1674 aa0.2□□□□□ -2.38
RGPD6-209ENST00000480894 ANK2Q01484 3957 aa0.2□□□□□ -2.38
RGPD6-209ENST00000480894 MAST4O15021 2626 aa0.19□□□□□ -2.38
RGPD6-209ENST00000480894 EIF4G3O43432 1585 aaKnown RBP0.19□□□□□ -2.38
RGPD6-209ENST00000480894 PIEZO1Q92508 2521 aa0.19□□□□□ -2.38
RGPD6-209ENST00000480894 M0R3E3 92 aa0.19□□□□□ -2.38
RGPD6-209ENST00000480894 CFDP00746 253 aaPredicted RBP0.19□□□□□ -2.38
RGPD6-209ENST00000480894 FAM167A-AS1Q96KT0 104 aa0.19□□□□□ -2.38
RGPD6-209ENST00000480894 ERCC6L2Q5T890 1561 aa0.19□□□□□ -2.38
RGPD6-209ENST00000480894 BIVM-ERCC5R4GMW8 1640 aa0.18□□□□□ -2.38
RGPD6-209ENST00000480894 LRP1Q07954 4544 aaKnown RBP0.18□□□□□ -2.38
RGPD6-209ENST00000480894 TP53AIP1Q9HCN2 124 aa0.18□□□□□ -2.38
RGPD6-209ENST00000480894 NXT2Q9NPJ8 142 aaKnown RBP0.18□□□□□ -2.38
RGPD6-209ENST00000480894 SCAPERQ9BY12 1400 aa0.18□□□□□ -2.38
RGPD6-209ENST00000480894 IGF2RP11717 2491 aa0.18□□□□□ -2.38
RGPD6-209ENST00000480894 SHANK2Q9UPX8 1470 aa0.17□□□□□ -2.38
RGPD6-209ENST00000480894 LAMC1P11047 1609 aa0.17□□□□□ -2.38
RGPD6-209ENST00000480894 Q8IZM0 81 aa0.17□□□□□ -2.38
RGPD6-209ENST00000480894 NCOA3Q9Y6Q9 1424 aa0.17□□□□□ -2.38
RGPD6-209ENST00000480894 FAM208BQ5VWN6 2430 aa0.17□□□□□ -2.38
RGPD6-209ENST00000480894 SHROOM2Q13796 1616 aa0.16□□□□□ -2.38
RGPD6-209ENST00000480894 AHCTF1Q8WYP5 2266 aa0.16□□□□□ -2.38
RGPD6-209ENST00000480894 H3BQ15 152 aa0.16□□□□□ -2.38
RGPD6-209ENST00000480894 MGPP08493 103 aa0.16□□□□□ -2.38
RGPD6-209ENST00000480894 WFDC2Q14508 124 aa0.16□□□□□ -2.38
RGPD6-209ENST00000480894 MAPKBP1O60336 1514 aa0.16□□□□□ -2.38
RGPD6-209ENST00000480894 ZFYVE26Q68DK2 2539 aa0.16□□□□□ -2.38
RGPD6-209ENST00000480894 SBF2Q86WG5 1849 aa0.15□□□□□ -2.38
RGPD6-209ENST00000480894 MYOM1P52179 1685 aa0.15□□□□□ -2.39
RGPD6-209ENST00000480894 IGLC1P0CG04 106 aa0.15□□□□□ -2.39
RGPD6-209ENST00000480894 WHAMMP3Q1A5X7 153 aa0.15□□□□□ -2.39
RGPD6-209ENST00000480894 GTF2H5Q6ZYL4 71 aa0.15□□□□□ -2.39
RGPD6-209ENST00000480894 SPRR4Q96PI1 79 aa0.15□□□□□ -2.39
RGPD6-209ENST00000480894 FAIMQ9NVQ4 179 aa0.15□□□□□ -2.39
RGPD6-209ENST00000480894 PZPP20742 1482 aa0.15□□□□□ -2.39
RGPD6-209ENST00000480894 NHSL1Q5SYE7 1610 aa0.14□□□□□ -2.39
RGPD6-209ENST00000480894 NAP1L6A6NFF2 107 aa0.14□□□□□ -2.39
RGPD6-209ENST00000480894 I3L2K1 104 aa0.14□□□□□ -2.39
RGPD6-209ENST00000480894 Q0VG73 95 aa0.14□□□□□ -2.39
RGPD6-209ENST00000480894 TMEM263Q8WUH6 116 aaKnown RBP0.14□□□□□ -2.39
RGPD6-209ENST00000480894 MANBALQ9NQG1 85 aa0.14□□□□□ -2.39
RGPD6-209ENST00000480894 ARL2-SNX15V9GYD0 113 aa0.14□□□□□ -2.39
RGPD6-209ENST00000480894 C20orf202A1L168 122 aa0.13□□□□□ -2.39
RGPD6-209ENST00000480894 HRNRQ86YZ3 2850 aaPredicted RBP0.13□□□□□ -2.39
RGPD6-209ENST00000480894 RAPGEF6Q8TEU7 1601 aa0.13□□□□□ -2.39
RGPD6-209ENST00000480894 FAM135AQ9P2D6 1515 aa0.13□□□□□ -2.39
RGPD6-209ENST00000480894 NRKQ7Z2Y5 1582 aa0.12□□□□□ -2.39
RGPD6-209ENST00000480894 UBE2D3P61077 147 aa0.12□□□□□ -2.39
RGPD6-209ENST00000480894 UBE2D2P62837 147 aa0.12□□□□□ -2.39
RGPD6-209ENST00000480894 HSD52Q0P140 79 aa0.12□□□□□ -2.39
RGPD6-209ENST00000480894 Q5VSD8 79 aa0.12□□□□□ -2.39
RGPD6-209ENST00000480894 CHD9Q3L8U1 2897 aa0.12□□□□□ -2.39
RGPD6-209ENST00000480894 COX6CP09669 75 aa0.11□□□□□ -2.39
RGPD6-209ENST00000480894 FAM223AQ8IWN6 122 aa0.11□□□□□ -2.39
RGPD6-209ENST00000480894 PRO1854Q9UHT4 67 aa0.11□□□□□ -2.39
RGPD6-209ENST00000480894 HMGXB3Q12766 1538 aa0.11□□□□□ -2.39
RGPD6-209ENST00000480894 NCOR2Q9Y618 2525 aa0.11□□□□□ -2.39
RGPD6-209ENST00000480894 S100PP25815 95 aa0.1□□□□□ -2.39
RGPD6-209ENST00000480894 SNCAP37840 140 aa0.1□□□□□ -2.39
RGPD6-209ENST00000480894 PIGYQ3MUY2 71 aa0.1□□□□□ -2.39
RGPD6-209ENST00000480894 TCHHQ07283 1943 aa0.09□□□□□ -2.39
RGPD6-209ENST00000480894 SPTBN2O15020 2390 aa0.09□□□□□ -2.39
RGPD6-209ENST00000480894 TRBV6-1A0A0K0K1D8 114 aa0.09□□□□□ -2.4
RGPD6-209ENST00000480894 TMEM262E9PQX1 116 aa0.09□□□□□ -2.4
RGPD6-209ENST00000480894 TRAPPC2P0DI81 140 aa0.09□□□□□ -2.4
RGPD6-209ENST00000480894 TRAPPC2BP0DI82 140 aa0.09□□□□□ -2.4
RGPD6-209ENST00000480894 UBA52P62987 128 aaKnown RBP0.09□□□□□ -2.4
RGPD6-209ENST00000480894 DEFB109BQ30KR1 87 aa0.09□□□□□ -2.4
RGPD6-209ENST00000480894 NSD3Q9BZ95 1437 aa0.09□□□□□ -2.4
RGPD6-209ENST00000480894 ARHGEF5Q12774 1597 aa0.09□□□□□ -2.4
RGPD6-209ENST00000480894 C10orf142B7Z368 130 aa0.08□□□□□ -2.4
RGPD6-209ENST00000480894 KRTDAPP60985 99 aa0.08□□□□□ -2.4
RGPD6-209ENST00000480894 ARHGAP5Q13017 1502 aa0.08□□□□□ -2.4
RGPD6-209ENST00000480894 SPRR1AP35321 89 aa0.07□□□□□ -2.4
RGPD6-209ENST00000480894 C10orf113Q5VZT2 155 aa0.07□□□□□ -2.4
RGPD6-209ENST00000480894 SFTA2Q6UW10 78 aa0.07□□□□□ -2.4
RGPD6-209ENST00000480894 KDM5AP29375 1690 aaKnown RBP0.07□□□□□ -2.4
RGPD6-209ENST00000480894 UNC79Q9P2D8 2635 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms