RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PCBD1P61457 104 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 PSPHP78330 225 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 HIST1H1AQ02539 215 aaPredicted RBP0.3□□□□□ -2.36
CALD1-219ENST00000480638 GLYATL3Q5SZD4 288 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 Q5VSD8 79 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 LINC00299Q6ZSB3 139 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 CCL19Q99731 98 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 GSKIPQ9P0R6 139 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 METTL1Q9UBP6 276 aaKnown RBP0.3□□□□□ -2.36
CALD1-219ENST00000480638 HSPB8Q9UJY1 196 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 LSM2Q9Y333 95 aaKnown RBP0.3□□□□□ -2.36
CALD1-219ENST00000480638 NUP210Q8TEM1 1887 aaPredicted RBP0.3□□□□□ -2.36
CALD1-219ENST00000480638 USP54Q70EL1 1684 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 CTTNBP2Q8WZ74 1663 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 RICTORQ6R327 1708 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 XRN1Q8IZH2 1706 aaKnown RBP0.3□□□□□ -2.36
CALD1-219ENST00000480638 ARAP2Q8WZ64 1704 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 HFM1A2PYH4 1435 aa0.3□□□□□ -2.36
CALD1-219ENST00000480638 COL14A1Q05707 1796 aaKnown RBP0.29□□□□□ -2.36
CALD1-219ENST00000480638 ANKRD31Q8N7Z5 1873 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 EIF2AK4Q9P2K8 1649 aaKnown RBP0.29□□□□□ -2.36
CALD1-219ENST00000480638 BORCS7-ASMTA0A0B4J1R7 106 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 FAM236AA0A1B0GUQ0 79 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 FAM236BA0A1B0GV22 79 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 LOC101927531A0A1B0GV80 90 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 IFITM5A6NNB3 132 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 BBIP1A8MTZ0 92 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 K7EIL1 84 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 M0R129 80 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 IGF2P01344 180 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 IL7P13232 177 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 HLA-DRB4P13762 266 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 ETV6P41212 452 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 DNAJB13P59910 316 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 ASB16-AS1Q495Z4 193 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 CCSMST1Q4G0I0 132 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 LYPD5Q6UWN5 251 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 LINC00575Q6W349 94 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 Q86TA4 180 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 C10orf111Q8N326 155 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 OR4S1Q8NGB4 309 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 LINC00208Q96KT6 92 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 AP1S3Q96PC3 154 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 SMIM7Q9BQ49 75 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 CALML5Q9NZT1 146 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 MRPL36Q9P0J6 103 aaKnown RBP0.29□□□□□ -2.36
CALD1-219ENST00000480638 HLA-DRB4X5D2U9 266 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 F5P12259 2224 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 PTPRGP23470 1445 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 FER1L6Q2WGJ9 1857 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 POLA1P09884 1462 aaPredicted RBP0.29□□□□□ -2.36
CALD1-219ENST00000480638 NLRP1Q9C000 1473 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 ARHGAP35Q9NRY4 1499 aa0.29□□□□□ -2.36
CALD1-219ENST00000480638 ASCC3Q8N3C0 2202 aaKnown RBP0.28□□□□□ -2.36
CALD1-219ENST00000480638 A0A0D9SG42 100 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 TRBV30A0A0K0K1B3 111 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 TMEM30CPA0ZSE6 113 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 SMIM24O75264 130 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 SULT1C4O75897 302 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 GYPBP06028 91 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 DBIP07108 87 aaKnown RBP0.28□□□□□ -2.36
CALD1-219ENST00000480638 IGLC6P0CF74 106 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 LINC00694P0DN24 101 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 HIST1H1BP16401 226 aaKnown RBP0.28□□□□□ -2.36
CALD1-219ENST00000480638 ADCYAP1P18509 176 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 KDELR1P24390 212 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 FXYD3Q14802 87 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 SPCS2Q15005 226 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 RHOHQ15669 191 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 IQCJQ1A5X6 159 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 CLLU1Q5K131 121 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 Q6ZQY7 126 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 C3orf62Q6ZUJ4 267 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 C5orf56Q8N8D9 126 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 OR8J3Q8NGG0 315 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 PLAC4Q8WY50 150 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 MAFIPQ8WZ33 124 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 ANP32BQ92688 251 aaKnown RBP0.28□□□□□ -2.36
CALD1-219ENST00000480638 SMIM3Q9BZL3 60 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 SLC35B3Q9H1N7 401 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 SPANXA1Q9NS26 97 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 BOKQ9UMX3 212 aaPredicted RBP0.28□□□□□ -2.36
CALD1-219ENST00000480638 SIP14410 1827 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 TRPM7Q96QT4 1865 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 CPDO75976 1380 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 MYLKQ15746 1914 aa0.28□□□□□ -2.36
CALD1-219ENST00000480638 OVOS2A0A0J9YW53 1432 aa0.28□□□□□ -2.37
CALD1-219ENST00000480638 OVOS2Q6IE36 1432 aa0.28□□□□□ -2.37
CALD1-219ENST00000480638 MYO18AQ92614 2054 aaKnown RBP0.28□□□□□ -2.37
CALD1-219ENST00000480638 QRICH2Q9H0J4 1663 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 NRAPQ86VF7 1730 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 TRAV17A0A0B4J275 112 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 A0A0G2JMM0 328 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 CXorf51AA0A1B0GTR3 108 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 PNMA8CA0A1B0GUJ8 204 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 TPST1O60507 370 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 PITX3O75364 302 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 LY6G6CO95867 125 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 TSPAN19P0C672 248 aa0.27□□□□□ -2.37
CALD1-219ENST00000480638 MPC1LP0DKB6 136 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms