RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PKIAP61925 76 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 RBX1P62877 108 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 MRPS36P82909 103 aaKnown RBP12.02□□□□□ -0.49
UPF3A-206ENST00000480362 MPV17L2Q567V2 206 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
UPF3A-206ENST00000480362 PAPPA-AS1Q5QFB9 102 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 Q6ZUT4 128 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 Q8N976 141 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 VCX2Q9H322 139 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 PET117Q6UWS5 81 aa12.01□□□□□ -0.49
UPF3A-206ENST00000480362 SPATA12Q7Z6I5 190 aa12.01□□□□□ -0.49
UPF3A-206ENST00000480362 ZNF664Q8N3J9 261 aa12.01□□□□□ -0.49
UPF3A-206ENST00000480362 MRPS16Q9Y3D3 137 aaKnown RBP12.01□□□□□ -0.49
UPF3A-206ENST00000480362 A0A087WX48 190 aa12□□□□□ -0.49
UPF3A-206ENST00000480362 PMVKQ15126 192 aa12□□□□□ -0.49
UPF3A-206ENST00000480362 Q8N3U1 123 aa12□□□□□ -0.49
UPF3A-206ENST00000480362 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
UPF3A-206ENST00000480362 TEX43Q6ZNM6 134 aa11.99□□□□□ -0.49
UPF3A-206ENST00000480362 AMELXQ99217 191 aa11.99□□□□□ -0.49
UPF3A-206ENST00000480362 CST9LQ9H4G1 147 aa11.99□□□□□ -0.49
UPF3A-206ENST00000480362 TRAV12-1A0A0B4J245 112 aa11.98□□□□□ -0.49
UPF3A-206ENST00000480362 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
UPF3A-206ENST00000480362 IGHV3-33P01772 117 aa11.98□□□□□ -0.49
UPF3A-206ENST00000480362 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
UPF3A-206ENST00000480362 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
UPF3A-206ENST00000480362 SCGB1D1O95968 90 aa11.97□□□□□ -0.49
UPF3A-206ENST00000480362 ODF1Q14990 250 aa11.97□□□□□ -0.49
UPF3A-206ENST00000480362 JOSD1Q15040 202 aaPredicted RBP11.97□□□□□ -0.49
UPF3A-206ENST00000480362 LINC01545Q5VT33 79 aa11.97□□□□□ -0.49
UPF3A-206ENST00000480362 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
UPF3A-206ENST00000480362 PMCHL2Q9BQD1 86 aa11.97□□□□□ -0.49
UPF3A-206ENST00000480362 DNAH7Q8WXX0 4024 aa11.96□□□□□ -0.49
UPF3A-206ENST00000480362 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
UPF3A-206ENST00000480362 LGALS9CQ6DKI2 356 aa11.96□□□□□ -0.49
UPF3A-206ENST00000480362 UPK3BQ9BT76 320 aa11.96□□□□□ -0.49
UPF3A-206ENST00000480362 CHTOPQ9Y3Y2 248 aaKnown RBP11.96□□□□□ -0.49
UPF3A-206ENST00000480362 DYNC2H1Q8NCM8 4307 aaKnown RBP11.95□□□□□ -0.5
UPF3A-206ENST00000480362 C20orf202A1L168 122 aa11.95□□□□□ -0.5
UPF3A-206ENST00000480362 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
UPF3A-206ENST00000480362 IGKV3OR2-268A0A0C4DH90 116 aa11.94□□□□□ -0.5
UPF3A-206ENST00000480362 SIVA1O15304 175 aa11.94□□□□□ -0.5
UPF3A-206ENST00000480362 DNAH10OSP0CZ25 163 aa11.94□□□□□ -0.5
UPF3A-206ENST00000480362 PYY3Q5JQD4 70 aa11.94□□□□□ -0.5
UPF3A-206ENST00000480362 LINC01556Q5JQF7 62 aa11.94□□□□□ -0.5
UPF3A-206ENST00000480362 MRPL35Q9NZE8 188 aaKnown RBP11.94□□□□□ -0.5
UPF3A-206ENST00000480362 F8VRH5 84 aa11.93□□□□□ -0.5
UPF3A-206ENST00000480362 LINC00269Q8N2A0 174 aa11.93□□□□□ -0.5
UPF3A-206ENST00000480362 KLK12Q9UKR0 248 aa11.93□□□□□ -0.5
UPF3A-206ENST00000480362 TRAV13-1A0A0B4J241 112 aa11.92□□□□□ -0.5
UPF3A-206ENST00000480362 C3orf84H3BNL1 204 aa11.92□□□□□ -0.5
UPF3A-206ENST00000480362 UBE2D1P51668 147 aa11.92□□□□□ -0.5
UPF3A-206ENST00000480362 CASC10Q5T4H9 136 aa11.92□□□□□ -0.5
UPF3A-206ENST00000480362 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
UPF3A-206ENST00000480362 Q9H8V8 135 aa11.92□□□□□ -0.5
UPF3A-206ENST00000480362 IGLV4-69A0A075B6H9 119 aa11.91□□□□□ -0.5
UPF3A-206ENST00000480362 A0A0J9YXV3 536 aa11.91□□□□□ -0.5
UPF3A-206ENST00000480362 REG3AQ06141 175 aa11.91□□□□□ -0.5
UPF3A-206ENST00000480362 LINC00959A0A1B0GUT2 108 aa11.9□□□□□ -0.5
UPF3A-206ENST00000480362 DPM2O94777 84 aa11.9□□□□□ -0.5
UPF3A-206ENST00000480362 ATOH7Q8N100 152 aa11.9□□□□□ -0.5
UPF3A-206ENST00000480362 IGKCP01834 107 aa11.89□□□□□ -0.51
UPF3A-206ENST00000480362 ENHOQ6UWT2 76 aa11.89□□□□□ -0.51
UPF3A-206ENST00000480362 PRR34Q9NV39 138 aa11.89□□□□□ -0.51
UPF3A-206ENST00000480362 C11orf86A6NJI1 115 aa11.88□□□□□ -0.51
UPF3A-206ENST00000480362 IGLC3P0DOY3 106 aa11.88□□□□□ -0.51
UPF3A-206ENST00000480362 PLNP26678 52 aa11.88□□□□□ -0.51
UPF3A-206ENST00000480362 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
UPF3A-206ENST00000480362 FAM19A3Q7Z5A8 133 aa11.88□□□□□ -0.51
UPF3A-206ENST00000480362 NFE4Q86UQ8 179 aa11.88□□□□□ -0.51
UPF3A-206ENST00000480362 CSMD3Q7Z407 3707 aa11.87□□□□□ -0.51
UPF3A-206ENST00000480362 TINCRA0A1B0GVN0 87 aa11.87□□□□□ -0.51
UPF3A-206ENST00000480362 SS18Q15532 418 aa11.87□□□□□ -0.51
UPF3A-206ENST00000480362 CDPF1Q6NVV7 123 aa11.87□□□□□ -0.51
UPF3A-206ENST00000480362 UBE2WQ96B02 151 aa11.87□□□□□ -0.51
UPF3A-206ENST00000480362 CRPP02741 224 aa11.86□□□□□ -0.51
UPF3A-206ENST00000480362 SMIM6P0DI80 62 aa11.86□□□□□ -0.51
UPF3A-206ENST00000480362 SEC11AP67812 179 aa11.86□□□□□ -0.51
UPF3A-206ENST00000480362 COX6A2Q02221 97 aa11.86□□□□□ -0.51
UPF3A-206ENST00000480362 CHAC1Q9BUX1 264 aa11.86□□□□□ -0.51
UPF3A-206ENST00000480362 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
UPF3A-206ENST00000480362 TGP01266 2768 aa11.86□□□□□ -0.51
UPF3A-206ENST00000480362 STARD9Q9P2P6 4700 aa11.85□□□□□ -0.51
UPF3A-206ENST00000480362 TRAV9-2A0A087WT02 112 aa11.85□□□□□ -0.51
UPF3A-206ENST00000480362 CCL25O15444 150 aa11.85□□□□□ -0.51
UPF3A-206ENST00000480362 IGLV10-54A0A075B6I4 117 aa11.84□□□□□ -0.51
UPF3A-206ENST00000480362 HERVK_113P63121 156 aa11.84□□□□□ -0.51
UPF3A-206ENST00000480362 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
UPF3A-206ENST00000480362 IBA57-AS1B1ANH7 110 aa11.83□□□□□ -0.52
UPF3A-206ENST00000480362 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-206ENST00000480362 MIAQ16674 131 aa11.83□□□□□ -0.52
UPF3A-206ENST00000480362 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
UPF3A-206ENST00000480362 CHCHD10Q8WYQ3 142 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-206ENST00000480362 TRAV8-4A0A0B4J246 113 aa11.82□□□□□ -0.52
UPF3A-206ENST00000480362 hDV102S1A0JD36 115 aa11.82□□□□□ -0.52
UPF3A-206ENST00000480362 K7EP13 123 aa11.82□□□□□ -0.52
UPF3A-206ENST00000480362 XCL1P47992 114 aa11.82□□□□□ -0.52
UPF3A-206ENST00000480362 MAJINQ3KP22 176 aa11.82□□□□□ -0.52
UPF3A-206ENST00000480362 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
UPF3A-206ENST00000480362 STPG4Q8N801 248 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms