RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 Q8IZM0 81 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 LINC01561Q8N1V8 128 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 TRAV23DV6A0A075B6W5 121 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 TSHBP01222 138 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 IL17DQ8TAD2 202 aa4.58□□□□□ -1.68
PRPF4B-205ENST00000480058 LOC107984640A0A0U1RRK4 108 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 SLURP1P55000 103 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 SERP1Q9Y6X1 66 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 NOTCH4Q99466 2003 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 IGHV4-30-2A0A087WSY4 118 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 C6orf99Q4VX62 202 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 MIFP14174 115 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 TRBV7-7A0A0K0K1E9 115 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 REG3AQ06141 175 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 Q9HAA7 133 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 KLK12Q9UKR0 248 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 DSCAML1Q8TD84 2053 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 ADORA2A-AS1P86434 159 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 LINC00467Q9BRT7 94 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 MED12LQ86YW9 2145 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 NTM-AS1Q6ZSK4 140 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 FAM110AQ9BQ89 295 aa4.57□□□□□ -1.68
PRPF4B-205ENST00000480058 J3QKU1 62 aa4.56□□□□□ -1.68
PRPF4B-205ENST00000480058 M0R378 163 aa4.56□□□□□ -1.68
PRPF4B-205ENST00000480058 APRG1Q8IVJ8 170 aa4.56□□□□□ -1.68
PRPF4B-205ENST00000480058 Q6ZQT7 251 aa4.56□□□□□ -1.68
PRPF4B-205ENST00000480058 CHCHD10Q8WYQ3 142 aaPredicted RBP4.56□□□□□ -1.68
PRPF4B-205ENST00000480058 Q6ZTI0 123 aa4.56□□□□□ -1.68
PRPF4B-205ENST00000480058 SPRY2O43597 315 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 SDIM1Q6ZPB5 146 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 C1orf229Q6ZS94 237 aaPredicted RBP4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 ANKRD11Q6UB99 2663 aaPredicted RBP4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 CCKP06307 115 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 DEFB121Q5J5C9 76 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 AMELXQ99217 191 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 C11orf21Q9P2W6 132 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 SMAD5-AS1Q9Y6J3 95 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 ANAPC1Q9H1A4 1944 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 IGLV1-40P01703 118 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 Q6ZQY7 126 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 UBE2D4Q9Y2X8 147 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 SYCNQ0VAF6 134 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 A0A096LNJ9 63 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 K7ERS5 55 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 B9D2Q9BPU9 175 aa4.55□□□□□ -1.68
PRPF4B-205ENST00000480058 SEC61GP60059 68 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 EGFEM1PQ0D2K5 195 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 IGLV10-54A0A075B6I4 117 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 ENHOQ6UWT2 76 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 GRNP28799 593 aaKnown RBP4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 Q8NA96 180 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 LINC00242Q5T6M2 205 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 Q6YL49 198 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 CDC42SE2Q9NRR3 84 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 BRWD3Q6RI45 1802 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 FRMPD3Q5JV73 1810 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 A0A1W2PNU3 283 aaPredicted RBP4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 PPDPFQ9H3Y8 114 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 DENND4AQ7Z401 1863 aa4.54□□□□□ -1.68
PRPF4B-205ENST00000480058 LINC01548A6NM66 108 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 CLPSL2Q6UWE3 100 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 NDUFS5O43920 106 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 DEFB136Q30KP8 78 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 CEMP1Q6PRD7 247 aaPredicted RBP4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 A0A087WZ39 114 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 LELP1Q5T871 98 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 C11orf71Q6IPW1 123 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 IGLV2-18A0A075B6J9 118 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 LINC01546A6NGU7 62 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 BEAN1Q3B7T3 259 aa4.53□□□□□ -1.68
PRPF4B-205ENST00000480058 DEFB105AQ8NG35 78 aa4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 WISP2O76076 250 aa4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 Q8N9L7 120 aa4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 ZNF73O43830 326 aaPredicted RBP4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 CRYGAP11844 174 aa4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 DCANP1Q8TF63 244 aa4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 PRRC2AP48634 2157 aaKnown RBP4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 SMIM1B2RUZ4 78 aa4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 A0A096LPF7 62 aa4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 MYLKQ15746 1914 aa4.52□□□□□ -1.69
PRPF4B-205ENST00000480058 POM121L12Q8N7R1 296 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 LINC00959A0A1B0GUT2 108 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 LINC00269Q8N2A0 174 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 IGLV4-69A0A075B6H9 119 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 ACANP16112 2415 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 C4orf48Q5BLP8 95 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 Q6ZS46 218 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 FASNP49327 2511 aaKnown RBP4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 A0A1B0GUV1 79 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 NCR3O14931 201 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 SBSPONQ8IVN8 264 aa4.51□□□□□ -1.69
PRPF4B-205ENST00000480058 SMIM11BQ8TCY0 68 aa4.5□□□□□ -1.69
PRPF4B-205ENST00000480058 ZNF706Q9Y5V0 76 aaPredicted RBP4.5□□□□□ -1.69
PRPF4B-205ENST00000480058 NUP210Q8TEM1 1887 aaPredicted RBP4.5□□□□□ -1.69
PRPF4B-205ENST00000480058 WDR81Q562E7 1941 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms