RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 DEFB4AO15263 64 aa7.72□□□□□ -1.17
VTI1A-204ENST00000480057 FAM19A3Q7Z5A8 133 aa7.72□□□□□ -1.17
VTI1A-204ENST00000480057 OPRPNQ99935 248 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-204ENST00000480057 CELA1Q9UNI1 258 aa7.72□□□□□ -1.17
VTI1A-204ENST00000480057 H3BNG1 76 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 UBE2L6O14933 153 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 NMUP48645 174 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 SEC11AP67812 179 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 CTAG1AP78358 180 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 Q6ZUT4 128 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 TMEM101Q96IK0 257 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 MDFIQ99750 246 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 CHAC1Q9BUX1 264 aa7.71□□□□□ -1.18
VTI1A-204ENST00000480057 IGKV2D-26A0A0A0MRZ7 120 aa7.7□□□□□ -1.18
VTI1A-204ENST00000480057 TINCRA0A1B0GVN0 87 aa7.7□□□□□ -1.18
VTI1A-204ENST00000480057 TIRAPP58753 221 aa7.7□□□□□ -1.18
VTI1A-204ENST00000480057 OR5A1Q8NGJ0 315 aa7.7□□□□□ -1.18
VTI1A-204ENST00000480057 VSIG2Q96IQ7 327 aa7.7□□□□□ -1.18
VTI1A-204ENST00000480057 SPATA25Q9BR10 227 aa7.7□□□□□ -1.18
VTI1A-204ENST00000480057 HIGD1BQ9P298 99 aa7.7□□□□□ -1.18
VTI1A-204ENST00000480057 COL6A5A8TX70 2615 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 F5H768 121 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 K7EIL1 84 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 ZNF22P17026 224 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-204ENST00000480057 UBE2D1P51668 147 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 MRPL23Q16540 153 aaKnown RBP7.69□□□□□ -1.18
VTI1A-204ENST00000480057 C12orf74Q32Q52 190 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 AMMECR1LQ6DCA0 310 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 CEMP1Q6PRD7 247 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-204ENST00000480057 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 PCP2Q8IVA1 136 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 TM2D3Q9BRN9 247 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 SNHG12Q9BXW3 62 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 RETNQ9HD89 108 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 CDC42SE2Q9NRR3 84 aa7.69□□□□□ -1.18
VTI1A-204ENST00000480057 IGLV5-45A0A087WSX0 123 aa7.68□□□□□ -1.18
VTI1A-204ENST00000480057 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
VTI1A-204ENST00000480057 TMEM223A0PJW6 202 aa7.68□□□□□ -1.18
VTI1A-204ENST00000480057 TMEM170BQ5T4T1 132 aa7.68□□□□□ -1.18
VTI1A-204ENST00000480057 ICOSQ9Y6W8 199 aa7.68□□□□□ -1.18
VTI1A-204ENST00000480057 MYMXA0A1B0GTQ4 84 aa7.67□□□□□ -1.18
VTI1A-204ENST00000480057 A0A1B0GUV1 79 aa7.67□□□□□ -1.18
VTI1A-204ENST00000480057 EREGO14944 169 aa7.67□□□□□ -1.18
VTI1A-204ENST00000480057 PLEKHB2Q96CS7 222 aa7.67□□□□□ -1.18
VTI1A-204ENST00000480057 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
VTI1A-204ENST00000480057 LEPROTO15243 131 aa7.66□□□□□ -1.18
VTI1A-204ENST00000480057 HERVK_113P63121 156 aa7.66□□□□□ -1.18
VTI1A-204ENST00000480057 HSD52Q0P140 79 aa7.66□□□□□ -1.18
VTI1A-204ENST00000480057 GEMIN7Q9H840 131 aaKnown RBP7.66□□□□□ -1.18
VTI1A-204ENST00000480057 TRAV8-6A0A0B4J262 113 aa7.65□□□□□ -1.18
VTI1A-204ENST00000480057 A0A0J9YY99 117 aa7.65□□□□□ -1.18
VTI1A-204ENST00000480057 H3BRM9 83 aa7.65□□□□□ -1.18
VTI1A-204ENST00000480057 TCTAP57738 103 aa7.65□□□□□ -1.18
VTI1A-204ENST00000480057 GAGE6Q13070 117 aa7.65□□□□□ -1.18
VTI1A-204ENST00000480057 TAL2Q16559 108 aa7.65□□□□□ -1.18
VTI1A-204ENST00000480057 A0A0J9YWU9 116 aa7.64□□□□□ -1.19
VTI1A-204ENST00000480057 CCL25O15444 150 aa7.64□□□□□ -1.19
VTI1A-204ENST00000480057 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
VTI1A-204ENST00000480057 COL5A1-AS1Q5SY13 56 aa7.64□□□□□ -1.19
VTI1A-204ENST00000480057 LELP1Q5T871 98 aa7.64□□□□□ -1.19
VTI1A-204ENST00000480057 MAPKAPK5-AS1Q8N8E1 139 aa7.64□□□□□ -1.19
VTI1A-204ENST00000480057 C11orf45Q8TAV5 145 aa7.64□□□□□ -1.19
VTI1A-204ENST00000480057 TP73-AS1Q9UF72 201 aa7.64□□□□□ -1.19
VTI1A-204ENST00000480057 A0A096LPF7 62 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 IGHV1-58A0A0C4DH39 117 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 J3QQQ9 107 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 HTN3P15516 51 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 LGALS3P17931 250 aaKnown RBP7.63□□□□□ -1.19
VTI1A-204ENST00000480057 MPV17L2Q567V2 206 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 BVES-AS1Q5T3Y7 98 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 LINC00242Q5T6M2 205 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 LINC00469Q8N7U9 141 aa7.63□□□□□ -1.19
VTI1A-204ENST00000480057 HINT1P49773 126 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-204ENST00000480057 DEFB121Q5J5C9 76 aa7.62□□□□□ -1.19
VTI1A-204ENST00000480057 Q6ZTC4 211 aa7.62□□□□□ -1.19
VTI1A-204ENST00000480057 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
VTI1A-204ENST00000480057 IGLV4-60A0A075B6I1 120 aa7.61□□□□□ -1.19
VTI1A-204ENST00000480057 RBX1P62877 108 aa7.61□□□□□ -1.19
VTI1A-204ENST00000480057 BATFQ16520 125 aa7.61□□□□□ -1.19
VTI1A-204ENST00000480057 PKD1L1Q8TDX9 2849 aa7.61□□□□□ -1.19
VTI1A-204ENST00000480057 TRAV13-1A0A0B4J241 112 aa7.6□□□□□ -1.19
VTI1A-204ENST00000480057 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
VTI1A-204ENST00000480057 PRB2P02812 416 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-204ENST00000480057 IGHV3-30-3P0DP02 117 aa7.6□□□□□ -1.19
VTI1A-204ENST00000480057 TSPEAR-AS2P59090 65 aa7.6□□□□□ -1.19
VTI1A-204ENST00000480057 ORAOV1Q8WV07 137 aa7.6□□□□□ -1.19
VTI1A-204ENST00000480057 CDKN2A-AS1Q9UH64 79 aa7.6□□□□□ -1.19
VTI1A-204ENST00000480057 NBEAL2Q6ZNJ1 2754 aa7.6□□□□□ -1.19
VTI1A-204ENST00000480057 DEFB131BA0A096LNP1 70 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 TRAV10A0A0B4J240 114 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 TMEM262E9PQX1 116 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 COX6A2Q02221 97 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 KRTAP21-3Q3LHN1 58 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 LYPD5Q6UWN5 251 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 LURAP1LQ8IV03 231 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 LINC01561Q8N1V8 128 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 TM2D2Q9BX73 214 aa7.59□□□□□ -1.19
VTI1A-204ENST00000480057 SPANXB1Q9NS25 103 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms