RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 HIST2H2BCQ6DN03 193 aa9.76□□□□□ -0.85
C9orf78-205ENST00000480023 HIST2H2BDQ6DRA6 164 aa9.76□□□□□ -0.85
C9orf78-205ENST00000480023 PTPRQQ9UMZ3 2332 aa9.76□□□□□ -0.85
C9orf78-205ENST00000480023 LOC107984640A0A0U1RRK4 108 aa9.76□□□□□ -0.85
C9orf78-205ENST00000480023 MALP21145 153 aa9.76□□□□□ -0.85
C9orf78-205ENST00000480023 KLK5Q9Y337 293 aaPredicted RBP9.76□□□□□ -0.85
C9orf78-205ENST00000480023 TMEM89A2RUT3 159 aa9.75□□□□□ -0.85
C9orf78-205ENST00000480023 C5orf47Q569G3 176 aa9.75□□□□□ -0.85
C9orf78-205ENST00000480023 GAGE2AQ6NT46 116 aa9.75□□□□□ -0.85
C9orf78-205ENST00000480023 ZFHX3Q15911 3703 aa9.75□□□□□ -0.85
C9orf78-205ENST00000480023 SPTAN1Q13813 2472 aaKnown RBP9.75□□□□□ -0.85
C9orf78-205ENST00000480023 DGAT2L7PQ6IED9 249 aa9.74□□□□□ -0.85
C9orf78-205ENST00000480023 PRIMA1Q86XR5 153 aa9.74□□□□□ -0.85
C9orf78-205ENST00000480023 OVOL2Q9BRP0 275 aa9.74□□□□□ -0.85
C9orf78-205ENST00000480023 IGHV3-38A0A0C4DH36 116 aa9.74□□□□□ -0.85
C9orf78-205ENST00000480023 RIF1Q5UIP0 2472 aaKnown RBP9.74□□□□□ -0.85
C9orf78-205ENST00000480023 TRAV13-2A0A0B4J235 113 aa9.73□□□□□ -0.85
C9orf78-205ENST00000480023 A0A0U1RRA0 63 aa9.73□□□□□ -0.85
C9orf78-205ENST00000480023 HTN1P15515 57 aa9.73□□□□□ -0.85
C9orf78-205ENST00000480023 RPL18AQ02543 176 aaKnown RBP9.73□□□□□ -0.85
C9orf78-205ENST00000480023 FAM19A5Q7Z5A7 132 aaPredicted RBP9.73□□□□□ -0.85
C9orf78-205ENST00000480023 F5H768 121 aa9.73□□□□□ -0.85
C9orf78-205ENST00000480023 OBSCN-AS1Q96MR7 158 aa9.73□□□□□ -0.85
C9orf78-205ENST00000480023 SMIM9A6NGZ8 99 aa9.72□□□□□ -0.85
C9orf78-205ENST00000480023 Q6JHZ5 121 aa9.72□□□□□ -0.85
C9orf78-205ENST00000480023 C11orf72Q8NBR9 251 aa9.72□□□□□ -0.85
C9orf78-205ENST00000480023 RS1O15537 224 aa9.71□□□□□ -0.85
C9orf78-205ENST00000480023 NBASA2RRP1 2371 aa9.71□□□□□ -0.86
C9orf78-205ENST00000480023 SYNJ2BPP57105 145 aa9.71□□□□□ -0.86
C9orf78-205ENST00000480023 Q9HAA7 133 aa9.71□□□□□ -0.86
C9orf78-205ENST00000480023 IGHV4-61A0A0C4DH41 118 aa9.7□□□□□ -0.86
C9orf78-205ENST00000480023 RBMY1BA6NDE4 496 aaKnown RBP9.7□□□□□ -0.86
C9orf78-205ENST00000480023 RBMY1EA6NEQ0 496 aaKnown RBP9.7□□□□□ -0.86
C9orf78-205ENST00000480023 DNAL4O96015 105 aa9.7□□□□□ -0.86
C9orf78-205ENST00000480023 RBMY1DP0C7P1 496 aaKnown RBP9.7□□□□□ -0.86
C9orf78-205ENST00000480023 TMEM258P61165 79 aa9.7□□□□□ -0.86
C9orf78-205ENST00000480023 KLRB1Q12918 225 aa9.7□□□□□ -0.86
C9orf78-205ENST00000480023 SORL1Q92673 2214 aa9.7□□□□□ -0.86
C9orf78-205ENST00000480023 hADV29S1A0JD25 119 aa9.7□□□□□ -0.86
C9orf78-205ENST00000480023 CRPP02741 224 aa9.7□□□□□ -0.86
C9orf78-205ENST00000480023 PIMREGQ9BSJ6 248 aa9.7□□□□□ -0.86
C9orf78-205ENST00000480023 PRM2P04554 102 aa9.69□□□□□ -0.86
C9orf78-205ENST00000480023 SERP2Q8N6R1 65 aa9.69□□□□□ -0.86
C9orf78-205ENST00000480023 C10orf99Q6UWK7 81 aa9.68□□□□□ -0.86
C9orf78-205ENST00000480023 LINC00337Q8N6G1 96 aa9.68□□□□□ -0.86
C9orf78-205ENST00000480023 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
C9orf78-205ENST00000480023 OR13C6PQ8NH95 151 aa9.68□□□□□ -0.86
C9orf78-205ENST00000480023 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
C9orf78-205ENST00000480023 IGKV2-28A0A075B6P5 120 aa9.67□□□□□ -0.86
C9orf78-205ENST00000480023 IGKV2D-28P01615 120 aa9.67□□□□□ -0.86
C9orf78-205ENST00000480023 DEFB131AP59861 70 aa9.67□□□□□ -0.86
C9orf78-205ENST00000480023 TRAV13-1A0A0B4J241 112 aa9.67□□□□□ -0.86
C9orf78-205ENST00000480023 H0YGX0 51 aa9.67□□□□□ -0.86
C9orf78-205ENST00000480023 HOXD3P31249 432 aaPredicted RBP9.67□□□□□ -0.86
C9orf78-205ENST00000480023 CDC42SE2Q9NRR3 84 aa9.67□□□□□ -0.86
C9orf78-205ENST00000480023 CELSR1Q9NYQ6 3014 aa9.67□□□□□ -0.86
C9orf78-205ENST00000480023 AKAP6Q13023 2319 aa9.66□□□□□ -0.86
C9orf78-205ENST00000480023 CEP295Q9C0D2 2601 aa9.66□□□□□ -0.86
C9orf78-205ENST00000480023 C9orf129Q5T035 196 aaKnown RBP9.66□□□□□ -0.86
C9orf78-205ENST00000480023 LINC00846Q9NV44 126 aa9.66□□□□□ -0.86
C9orf78-205ENST00000480023 A0A087WYN8 130 aa9.65□□□□□ -0.86
C9orf78-205ENST00000480023 C14orf132Q9NPU4 83 aa9.65□□□□□ -0.86
C9orf78-205ENST00000480023 ZFHX2Q9C0A1 2572 aaPredicted RBP9.65□□□□□ -0.86
C9orf78-205ENST00000480023 WIPF1O43516 503 aa9.65□□□□□ -0.86
C9orf78-205ENST00000480023 SMIM11BQ8TCY0 68 aa9.65□□□□□ -0.86
C9orf78-205ENST00000480023 C10orf105Q8TEF2 133 aa9.65□□□□□ -0.86
C9orf78-205ENST00000480023 DPH3Q96FX2 82 aa9.65□□□□□ -0.86
C9orf78-205ENST00000480023 Q96MF0 132 aa9.65□□□□□ -0.86
C9orf78-205ENST00000480023 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
C9orf78-205ENST00000480023 TRBV10-1A0A0K0K1A3 114 aa9.64□□□□□ -0.87
C9orf78-205ENST00000480023 NTM-AS1Q6ZSK4 140 aa9.64□□□□□ -0.87
C9orf78-205ENST00000480023 MSMBP08118 114 aa9.64□□□□□ -0.87
C9orf78-205ENST00000480023 ATP5J2P56134 94 aa9.64□□□□□ -0.87
C9orf78-205ENST00000480023 LINC01561Q8N1V8 128 aa9.64□□□□□ -0.87
C9orf78-205ENST00000480023 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
C9orf78-205ENST00000480023 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
C9orf78-205ENST00000480023 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
C9orf78-205ENST00000480023 USP17L23D6RBM5 183 aa9.62□□□□□ -0.87
C9orf78-205ENST00000480023 HIVEP3Q5T1R4 2406 aa9.62□□□□□ -0.87
C9orf78-205ENST00000480023 INSP01308 110 aa9.62□□□□□ -0.87
C9orf78-205ENST00000480023 RPL36AP83881 106 aaKnown RBP9.62□□□□□ -0.87
C9orf78-205ENST00000480023 IL17DQ8TAD2 202 aa9.62□□□□□ -0.87
C9orf78-205ENST00000480023 RPL36ALQ969Q0 106 aaKnown RBP9.62□□□□□ -0.87
C9orf78-205ENST00000480023 UCNP55089 124 aa9.61□□□□□ -0.87
C9orf78-205ENST00000480023 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
C9orf78-205ENST00000480023 AVPP01185 164 aa9.61□□□□□ -0.87
C9orf78-205ENST00000480023 IGHV4-59P01825 116 aa9.61□□□□□ -0.87
C9orf78-205ENST00000480023 A0A087WVE0 104 aa9.6□□□□□ -0.87
C9orf78-205ENST00000480023 K7EQD1 137 aa9.6□□□□□ -0.87
C9orf78-205ENST00000480023 KIR2DL5BQ8NHK3 375 aa9.6□□□□□ -0.87
C9orf78-205ENST00000480023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.6□□□□□ -0.87
C9orf78-205ENST00000480023 MAP6D1Q9H9H5 199 aa9.59□□□□□ -0.87
C9orf78-205ENST00000480023 CREBBPQ92793 2442 aa9.59□□□□□ -0.87
C9orf78-205ENST00000480023 CCL18P55774 89 aa9.59□□□□□ -0.87
C9orf78-205ENST00000480023 LECT2O14960 151 aa9.58□□□□□ -0.88
C9orf78-205ENST00000480023 NBL1P41271 181 aa9.58□□□□□ -0.88
C9orf78-205ENST00000480023 SS18Q15532 418 aa9.58□□□□□ -0.88
C9orf78-205ENST00000480023 ATRXP46100 2492 aa9.58□□□□□ -0.88
C9orf78-205ENST00000480023 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
C9orf78-205ENST00000480023 C19orf84I3L1E1 186 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms